Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for htr3a

Gene Name Gene ID Reads Annotation
htr3a ENSDARG00000089212 51 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]










Genes with expression patterns similar to htr3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. htr3a ENSDARG00000089212 51 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
2. syt11a ENSDARG00000057913 1145 3.372 0.739 0.902 - - - 0.839 - 0.892 - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
3. nebl ENSDARG00000021200 40 2.887 0.894 1.000 - - - - - 0.993 - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
4. KCNS3 KCNS3 82 2.875 - 1.000 0.894 - - 0.981 - - -
5. CLDN20 26 2.811 0.837 1.000 - - - 0.974 - - - claudin 20, transcript variant X2
6. TRPC4_1 TRPC4_1 212 2.795 0.803 1.000 - - - 0.992 - - -
7. TUBB2A TUBB2A 142 2.774 0.927 1.000 - - - 0.847 - - -
8. si:dkey-245p14.4 ENSDARG00000070320 418 2.769 0.961 0.825 - - - 0.983 - - - si:dkey-245p14.4 [Source:ZFIN;Acc:ZDB-GENE-061207-63]
9. zgc:113307 ENSDARG00000044894 17 2.761 0.837 1.000 - - - 0.924 - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
10. cacna2d3 ENSDARG00000078760 211 2.751 0.946 - - - - 0.840 - 0.965 - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
11. KCNAB2 KCNAB2 129 2.728 0.963 1.000 - - - 0.765 - - -
12. nptx1l ENSDARG00000074671 569 2.692 0.890 0.918 - - - 0.884 - - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
13. nrxn2a ENSDARG00000061454 291 2.685 0.913 0.881 - - - 0.891 - - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
14. PPFIA3 ENSDARG00000077053 310 2.661 0.843 - - - - 0.987 - 0.831 - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
15. rbfox3l rbfox3l 34 2.638 0.779 1.000 - - 0.859 - - - -
16. si:dkeyp-79c2.1 42 2.625 - 1.000 - - - 0.882 - - 0.743 si:dkeyp-79c2.1, transcript variant X2
17. SV2B SV2B 208 2.619 0.927 0.909 - - - 0.783 - - -
18. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.608 0.913 0.777 - - - 0.918 - - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
19. trpc1 ENSDARG00000061203 62 2.605 0.837 - 0.781 - - - - 0.987 - transient receptor potential cation channel, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-070830-1]
20. entpd3 ENSDARG00000035309 263 2.602 0.721 0.895 - - - 0.986 - - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
21. NPAS3 ENSDARG00000109820 362 2.569 0.723 1.000 - - - - - 0.846 - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
22. MAP6 MAP6 643 2.565 0.755 0.927 - - - 0.883 - - -
23. hs3st3l ENSDARG00000059903 184 2.521 0.844 0.745 - - - 0.932 - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]
24. stmn2a ENSDARG00000033234 2272 2.487 0.932 0.702 - - - 0.853 - - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
25. TUSC5 TUSC5 1436 2.475 0.930 0.701 - - - 0.844 - - -
26. AP5Z1 ENSDARG00000078111 91 2.47 0.837 0.757 - - - - - 0.876 - adaptor related protein complex 5 subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-120508-2]
27. sez6l2 ENSDARG00000076052 360 2.46 0.717 0.907 - - - 0.836 - - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
28. si:rp71-36a1.2 ENSDARG00000093686 81 2.456 - - 0.741 - - 0.766 - 0.949 - si:rp71-36a1.2 [Source:ZFIN;Acc:ZDB-GENE-050208-646]
29. amph ENSDARG00000007663 599 2.448 0.821 0.909 - - - 0.718 - - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
30. dtnbb ENSDARG00000013020 280 2.445 0.728 0.756 - - - 0.961 - - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
31. runx3 ENSDARG00000052826 247 2.402 0.874 0.751 - - - 0.777 - - - runt-related transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-000605-2]
32. MAP1A MAP1A 847 2.401 0.872 0.811 - - - 0.718 - - -
33. bend3 ENSDARG00000076903 320 2.383 0.733 - - - - 0.788 - 0.862 - BEN domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-090312-181]
34. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 2.353 0.732 0.763 - - - 0.858 - - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
35. PCDH9 ENSDARG00000063264 1309 2.314 0.749 0.786 - - - - - 0.779 - protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]
36. rtn1b ENSDARG00000021143 1682 2.277 0.744 0.783 - - - 0.750 - - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
37. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 2.271 0.712 0.815 - - - 0.744 - - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
38. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.982 0.986 - - - - 0.996 - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
39. CT025910.1 CT025910.1 143 1.973 - 1.000 - - - 0.973 - - -
40. zgc:113274 ENSDARG00000059235, ENSDARG00000116981 19 1.972 - 1.000 - - - 0.972 - - - zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]
41. cacng3b ENSDARG00000076401 91 1.968 0.968 1.000 - - - - - - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
42. PLCXD1_3 PLCXD1_3 35 1.966 - 1.000 - - - 0.966 - - -
43. penka ENSDARG00000004869 161 1.964 0.973 0.991 - - - - - - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
44. kcnip1b ENSDARG00000034808, ENSDARG00000111766 136 1.951 - 1.000 - - - 0.951 - - - Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]
45. htr2cl1 ENSDARG00000018228, ENSDARG00000113913 131 1.949 - 1.000 - - - 0.949 - - - 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1 [Source:ZFIN;Acc:ZDB-GENE-081104-48]
46. her3 ENSDARG00000076857 131 1.942 - 1.000 - - - 0.942 - - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
47. tspan3b ENSDARG00000053559, ENSDARG00000112641 118 1.939 - 1.000 - - - - - 0.939 - tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
48. lingo1a ENSDARG00000034165 179 1.933 - 1.000 - - - 0.933 - - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
49. atpv0e2 ENSDARG00000059057 585 1.93 0.937 - - - - 0.993 - - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
50. tmem91 ENSDARG00000068456 81 1.927 - 1.000 - - - 0.927 - - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
51. mkrn2 ENSDARG00000007630 127 1.907 - - - - - 0.949 - 0.958 - makorin, ring finger protein, 2 [Source:ZFIN;Acc:ZDB-GENE-020213-2]
52. calb1 ENSDARG00000031598 252 1.9 0.900 1.000 - - - - - - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
53. syt9a ENSDARG00000003994 298 1.898 0.965 - - - - 0.933 - - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
54. ENSDARG00000086878 ENSDARG00000086878 332 1.896 - 0.898 - - - 0.998 - - -
55. CU179656.1 ENSDARG00000107086 270 1.895 0.926 0.969 - - - - - - -
56. ksr2 ENSDARG00000094526 134 1.888 - 0.901 - - - 0.987 - - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
57. C9H2orf69 C9H2orf69 148 1.881 0.968 - - - - 0.913 - - -
58. GRIN2B GRIN2B 140 1.88 0.894 - - - - 0.986 - - -
59. gnb5b ENSDARG00000055377 98 1.877 - 0.898 - - - - - 0.979 - guanine nucleotide binding protein (G protein), beta 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1712]
60. mir133a-1 77 1.877 - - - - - 0.928 - 0.949 - microRNA 133a-1
61. cbln1 ENSDARG00000057296 165 1.873 0.876 - - - - 0.997 - - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
62. si:ch1073-357b18.4 ENSDARG00000096602 121 1.857 - - - - - 0.873 - 0.984 - si:ch1073-357b18.4 [Source:ZFIN;Acc:ZDB-GENE-121214-213]
63. atxn1b ENSDARG00000060862 345 1.853 - 1.000 - - - 0.853 - - - ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
64. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 1.852 0.867 - - - - 0.985 - - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
65. nrsn1 ENSDARG00000111235 123 1.848 - 0.913 - - - 0.935 - - - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
66. ankrd37 ENSDARG00000056376 131 1.847 0.847 1.000 - - - - - - - ankyrin repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-070308-1]
67. atp2b3b ENSDARG00000023445 1424 1.839 0.992 - - - - 0.847 - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
68. si:dkey-200l5.4 ENSDARG00000095294 13 1.837 0.837 1.000 - - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
69. zgc:113210 ENSDARG00000002872 99 1.837 0.837 1.000 - - - - - - - zgc:113210 [Source:ZFIN;Acc:ZDB-GENE-050320-83]
70. CABZ01084273.1 CABZ01084273.1 16 1.837 0.837 1.000 - - - - - - -
71. FUT9 FUT9 91 1.837 0.837 1.000 - - - - - - -
72. SACM1L SACM1L 416 1.835 - - - - - 0.891 - 0.944 -
73. SLC36A4 ENSDARG00000039661 175 1.833 - 0.877 - - - 0.956 - - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
74. si:dkey-270b7.1 si:dkey-270b7.1 83 1.832 - - 0.920 - - 0.912 - - -
75. klf5b ENSDARG00000062106 7 1.832 - 1.000 - - 0.832 - - - - Kruppel-like factor 5b [Source:ZFIN;Acc:ZDB-GENE-080424-4]
76. abcc6a ENSDARG00000016750 10 1.832 - 1.000 0.832 - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 6a [Source:ZFIN;Acc:ZDB-GENE-050517-18]
77. zic3 ENSDARG00000071497 1448 1.829 0.834 - - - - 0.995 - - - zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030708-2]
78. tmem178 ENSDARG00000020758 77 1.823 0.937 - - - - 0.886 - - - transmembrane protein 178 [Source:ZFIN;Acc:ZDB-GENE-060929-756]
79. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1.821 0.875 - - - - 0.946 - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
80. KCNJ3_1 KCNJ3_1 30 1.821 0.837 - - - - 0.984 - - -
81. CDH8 172 1.82 - 1.000 - - - 0.820 - - - cadherin 8
82. C18H15orf59 C18H15orf59 80 1.819 0.819 1.000 - - - - - - -
83. DLK1 60 1.815 0.837 - - - - 0.978 - - - delta like non-canonical Notch ligand 1
84. HMGXB4 HMGXB4 209 1.813 0.898 - - - - - - 0.915 -
85. zic5 ENSDARG00000016022 1034 1.808 0.941 - - - - 0.867 - - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
86. AL935296.1 AL935296.1 4 1.807 - - 0.892 - 0.915 - - - -
87. si:busm1-180g5.7 si:busm1-180g5.7 15 1.807 - - 0.926 - 0.881 - - - -
88. mamdc1 mamdc1 156 1.807 - - - - - 0.831 - 0.976 -
89. kcng1 ENSDARG00000099038 23 1.804 0.837 - - - - 0.967 - - - potassium voltage-gated channel, subfamily G, member 1 [Source:ZFIN;Acc:ZDB-GENE-080220-5]
90. wnt11r ENSDARG00000014796 2860 1.803 0.944 - - - - 0.859 - - - wingless-type MMTV integration site family, member 11, related [Source:ZFIN;Acc:ZDB-GENE-980526-249]
91. pnoca ENSDARG00000025024 467 1.802 0.886 - - - - 0.916 - - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
92. nrg2b ENSDARG00000086585 100 1.799 0.820 - - - - - - 0.979 - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
93. tap1 ENSDARG00000079766 75 1.797 - 1.000 - - 0.797 - - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:ZFIN;Acc:ZDB-GENE-050517-43]
94. slc17a6b ENSDARG00000041150 823 1.793 - 1.000 - - - 0.793 - - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
95. prmt7 ENSDARG00000051902, ENSDARG00000113277, ENSDARG00000116251 440 1.79 - - - - - 0.811 - 0.979 - protein arginine methyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1560]
96. mdkb ENSDARG00000020708 5393 1.787 0.906 - - - - 0.881 - - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
97. iqsec3b ENSDARG00000093091 10 1.785 0.837 - - - 0.948 - - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
98. BX470131.1 BX470131.1 86 1.784 0.837 - - - - 0.947 - - -
99. cacna1ab ENSDARG00000006923 12 1.783 - 1.000 - - 0.783 - - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-3]
100. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 1.781 0.872 0.909 - - - - - - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]

There are 2395 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA