Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for htr1fa

Gene Name Gene ID Reads Annotation
htr1fa ENSDARG00000002773, ENSDARG00000109862 38 5-hydroxytryptamine (serotonin) receptor 1Fa [Source:ZFIN;Acc:ZDB-GENE-081105-125]










Genes with expression patterns similar to htr1fa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. htr1fa ENSDARG00000002773, ENSDARG00000109862 38 6 1.000 1.000 1.000 1.000 - - - 1.000 1.000 5-hydroxytryptamine (serotonin) receptor 1Fa [Source:ZFIN;Acc:ZDB-GENE-081105-125]
2. zgc:165481 ENSDARG00000060092 95 1.958 - - 0.962 - - - - - 0.996 zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
3. zgc:162184 ENSDARG00000077217 47 1.952 - - 0.974 - - - - - 0.978 zgc:162184 [Source:ZFIN;Acc:ZDB-GENE-070424-83]
4. CR759791.3 CR759791.3 134 1.916 - - - 0.966 - - - - 0.950
5. TRIM35_10 TRIM35_10 484 1.854 0.953 - - - - - - - 0.901
6. pex16 ENSDARG00000058202 486 1.853 - - 0.909 - - - - - 0.944 peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
7. lss ENSDARG00000061274 68 1.831 - - - 0.857 - - - - 0.974 lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [Source:ZFIN;Acc:ZDB-GENE-050119-7]
8. arl15a ENSDARG00000076040, ENSDARG00000114295 41 1.829 - - 0.842 - - - - - 0.987 ADP-ribosylation factor-like 15a [Source:ZFIN;Acc:ZDB-GENE-070209-3]
9. ltc4s ENSDARG00000062598 138 1.796 0.913 - - 0.883 - - - - - leukotriene C4 synthase [Source:ZFIN;Acc:ZDB-GENE-110411-32]
10. CEP170B ENSDARG00000074636 336 1.795 0.966 - - - - - - - 0.829 centrosomal protein 170B [Source:ZFIN;Acc:ZDB-GENE-131127-515]
11. fpgt ENSDARG00000042139 155 1.764 - 0.798 - - - - - - 0.966 fucose-1-phosphate guanylyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-489]
12. si:ch211-222k6.2 ENSDARG00000087046 144 1.754 - - 0.925 0.829 - - - - - si:ch211-222k6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9038]
13. zgc:193801 ENSDARG00000076552 37 1.75 - - 0.894 0.856 - - - - - zgc:193801 [Source:ZFIN;Acc:ZDB-GENE-081022-40]
14. creld2 ENSDARG00000029071, ENSDARG00000116264 333 1.742 0.899 - - - - - - - 0.843 cysteine-rich with EGF-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1626]
15. CU929356.4 CU929356.4 86 1.729 0.995 0.734 - - - - - - -
16. PLLP ENSDARG00000062756, ENSDARG00000109949 114 1.718 0.981 0.737 - - - - - - - plasmolipin [Source:ZFIN;Acc:ZDB-GENE-050419-195]
17. faxdc2 ENSDARG00000023820 260 1.716 0.861 - - - - - - - 0.855 fatty acid hydroxylase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2907]
18. slc12a4 ENSDARG00000014378 204 1.709 0.845 - - - - - - - 0.864 solute carrier family 12 (potassium/chloride transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-090218-27]
19. AP5B1 ENSDARG00000078805 62 1.701 0.998 - 0.703 - - - - - - adaptor related protein complex 5 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-131121-204]
20. si:ch73-257c13.2 ENSDARG00000074305 197 1.671 - - 0.708 - - - - - 0.963 si:ch73-257c13.2 [Source:ZFIN;Acc:ZDB-GENE-081104-269]
21. rmi1 ENSDARG00000041376 674 1.669 - - - 0.725 - - - - 0.944 RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-829]
22. atp2b1b ENSDARG00000007788 56 1.669 - 0.762 0.907 - - - - - - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
23. BX897684.1 BX897684.1 636 1.657 0.953 0.704 - - - - - - -
24. snx8a ENSDARG00000074842 411 1.646 0.807 - - - - - - - 0.839 sorting nexin 8a [Source:ZFIN;Acc:ZDB-GENE-031202-1]
25. si:ch211-102c2.8 ENSDARG00000093823 168 1.626 - - 0.769 - - - - - 0.857 si:ch211-102c2.8 [Source:ZFIN;Acc:ZDB-GENE-081104-98]
26. ptger1a ENSDARG00000078605 312 1.625 0.843 - - - - - - - 0.782 prostaglandin E receptor 1a (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-120215-261]
27. si:dkeyp-100a5.3 si:dkeyp-100a5.3 5 1.623 - - - 0.899 - - - 0.724 -
28. ecm2 ENSDARG00000071549 1527 1.617 - 0.773 - - - - - - 0.844 extracellular matrix protein 2, female organ and adipocyte specific [Source:ZFIN;Acc:ZDB-GENE-050208-651]
29. entpd4 ENSDARG00000038422 487 1.606 0.895 - - - - - - - 0.711 ectonucleoside triphosphate diphosphohydrolase 4 [Source:ZFIN;Acc:ZDB-GENE-040718-116]
30. mgat5 ENSDARG00000071506 324 1.595 - 0.874 - - - - - - 0.721 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-060616-238]
31. fam178a fam178a 29 1.592 - - 0.798 0.794 - - - - -
32. KDELR3 ENSDARG00000040912 109 1.578 - 0.716 - - - - - - 0.862 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1387]
33. fgf10a ENSDARG00000030932, ENSDARG00000116867 205 1.571 0.726 - - - - - - - 0.845 fibroblast growth factor 10a [Source:ZFIN;Acc:ZDB-GENE-030715-1]
34. gdnfa ENSDARG00000039959 345 1.566 0.802 - - - - - - - 0.764 glial cell derived neurotrophic factor a [Source:ZFIN;Acc:ZDB-GENE-010226-1]
35. cryzl1 ENSDARG00000026902 401 1.554 - 0.709 - - - - - - 0.845 crystallin, zeta (quinone reductase)-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-378]
36. ENSDARG00000051828 ENSDARG00000051828 47 1.553 - - - 0.761 - - - 0.792 -
37. zer1 ENSDARG00000105123 682 1.547 0.786 0.761 - - - - - - - zyg-11 related, cell cycle regulator [Source:ZFIN;Acc:ZDB-GENE-040426-2307]
38. zbtb46 ENSDARG00000078191, ENSDARG00000113888 231 1.536 0.799 0.737 - - - - - - - zinc finger and BTB domain containing 46 [Source:ZFIN;Acc:ZDB-GENE-090313-352]
39. lrch2 ENSDARG00000075580, ENSDARG00000116418 255 1.528 - - 0.752 0.776 - - - - - leucine-rich repeats and calponin homology (CH) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-080114-1]
40. PHTF1 PHTF1 1029 1.498 - 0.713 - - - - - - 0.785
41. pnpla8 ENSDARG00000078745 326 1.496 - 0.778 - - - - - - 0.718 patatin-like phospholipase domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-070705-553]
42. tmed8 ENSDARG00000052390 469 1.494 - 0.740 - - - - - - 0.754 transmembrane p24 trafficking protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-283]
43. CABZ01005777.1 CABZ01005777.1 505 1.485 0.747 - - - - - - - 0.738
44. nsd1b ENSDARG00000060705 88 1.485 0.765 - - 0.720 - - - - - nuclear receptor binding SET domain protein 1b [Source:ZFIN;Acc:ZDB-GENE-080519-2]
45. trim25 ENSDARG00000104396, ENSDARG00000110468, ENSDARG00000117057 262 1.481 0.768 0.713 - - - - - - - tripartite motif containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-797]
46. si:ch211-255f4.8 ENSDARG00000103571 91 1.466 - 0.756 0.710 - - - - - - si:ch211-255f4.8 [Source:ZFIN;Acc:ZDB-GENE-050208-709]
47. PDGFB PDGFB 259 1.447 - - 0.710 - - - - - 0.737
48. C25HXorf38 C25HXorf38 516 1.435 - - - - - - - 0.705 0.730
49. rfk ENSDARG00000060522 546 1.403 0.700 - - - - - - - 0.703 riboflavin kinase [Source:ZFIN;Acc:ZDB-GENE-081104-321]
50. serpinb1l2 ENSDARG00000070396 37 1 - - 1.000 - - - - - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041001-117]
51. LRTM1 ENSDARG00000098742 21 1 - - 1.000 - - - - - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
52. spaw ENSDARG00000014309 4 1 - - 1.000 - - - - - - southpaw [Source:ZFIN;Acc:ZDB-GENE-030219-1]
53. dnah1 ENSDARG00000100115 17 1 - - 1.000 - - - - - - dynein, axonemal, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-081015-3]
54. grapb ENSDARG00000022668 6 1 - - 1.000 - - - - - - GRB2 related adaptor protein b [Source:ZFIN;Acc:ZDB-GENE-050913-4]
55. si:ch211-218o21.4 ENSDARG00000079869 4 1 - - 1.000 - - - - - - si:ch211-218o21.4 [Source:ZFIN;Acc:ZDB-GENE-081104-178]
56. cyp2ae1 ENSDARG00000013524 14 1 - - 1.000 - - - - - - cytochrome P450, family 2, subfamily AE, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-090312-107]
57. si:dkey-247i3.6 ENSDARG00000092139, ENSDARG00000094308, ENSDARG00000100214 22 1 - - - 1.000 - - - - - si:dkey-247i3.6 [Source:ZFIN;Acc:ZDB-GENE-110913-83]
58. si:ch211-152n14.4 si:ch211-152n14.4 4 1 - - 1.000 - - - - - -
59. si:ch211-105d18.8 si:ch211-105d18.8 38 0.999 - - 0.999 - - - - - -
60. CLEC17A CLEC17A 42 0.998 - - 0.998 - - - - - -
61. ROCK2 ROCK2 8 0.998 - - 0.998 - - - - - -
62. si:ch211-202h22.10 ENSDARG00000087290 13 0.997 - - - - - - - - 0.997 si:ch211-202h22.10 [Source:ZFIN;Acc:ZDB-GENE-110914-121]
63. C5H9orf171 C5H9orf171 34 0.997 - - - - - - - - 0.997
64. CRHR2 ENSDARG00000092918, ENSDARG00000103704 12 0.997 - - - - - - - - 0.997 corticotropin releasing hormone receptor 2 [Source:NCBI gene;Acc:100002312]
65. si:ch211-76l23.5 si:ch211-76l23.5 26 0.996 - - - - - - - - 0.996
66. hmgcra ENSDARG00000052734, ENSDARG00000109336 45 0.996 - - - - - - - - 0.996 3-hydroxy-3-methylglutaryl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-040401-2]
67. ribc1 ENSDARG00000055739 32 0.996 - - - - - - - - 0.996 RIB43A domain with coiled-coils 1 [Source:ZFIN;Acc:ZDB-GENE-081031-7]
68. CABZ01113374.2 CABZ01113374.2 27 0.996 - - 0.996 - - - - - -
69. dao.3 ENSDARG00000035601 15 0.995 0.995 - - - - - - - - D-amino-acid oxidase, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1894]
70. MUC5AC MUC5AC 32 0.995 0.995 - - - - - - - -
71. SNORD38 SNORD38 171 0.995 0.995 - - - - - - - -
72. AL928712.1 AL928712.1 101 0.995 0.995 - - - - - - - -
73. crybb3 ENSDARG00000041301 48 0.995 0.995 - - - - - - - - crystallin, beta B3 [Source:ZFIN;Acc:ZDB-GENE-060130-2]
74. si:ch211-242f23.8 ENSDARG00000087585 22 0.995 0.995 - - - - - - - - si:ch211-242f23.8 [Source:ZFIN;Acc:ZDB-GENE-091204-11]
75. si:ch73-138i16.1 ENSDARG00000095562 8 0.995 0.995 - - - - - - - - si:ch73-138i16.1 [Source:ZFIN;Acc:ZDB-GENE-070705-208]
76. zgc:173837 ENSDARG00000076949 24 0.995 0.995 - - - - - - - - zgc:173837 [Source:ZFIN;Acc:ZDB-GENE-080213-12]
77. CT573256.1 ENSDARG00000091657 18 0.995 0.995 - - - - - - - - serine/threonine-protein kinase VRK1-like [Source:NCBI gene;Acc:794952]
78. igsf5 igsf5 85 0.995 0.995 - - - - - - - -
79. fasn_1 ENSDARG00000087657 31 0.995 0.995 - - - - - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
80. lipt2 ENSDARG00000069852 14 0.995 0.995 - - - - - - - - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
81. CR381673.1 ENSDARG00000098337 7 0.995 0.995 - - - - - - - -
82. ZNF337_17 ZNF337_17 12 0.995 0.995 - - - - - - - -
83. CREB3L3 CREB3L3 24 0.995 0.995 - - - - - - - -
84. emx3 ENSDARG00000020417 85 0.995 0.995 - - - - - - - - empty spiracles homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-53]
85. RAB38 122 0.995 0.995 - - - - - - - - RAB38, member RAS oncogene family
86. lrrc4.2 ENSDARG00000003020 235 0.995 0.995 - - - - - - - - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
87. sntg2 ENSDARG00000101660 19 0.995 0.995 - - - - - - - - syntrophin, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-060526-196]
88. si:ch211-67f13.7 ENSDARG00000077845 8 0.995 0.995 - - - - - - - - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]
89. fam101a 4 0.995 0.995 - - - - - - - - family with sequence similarity 101, member A
90. ZNF648 ENSDARG00000104823 194 0.995 0.995 - - - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
91. dnajb13 ENSDARG00000043157 50 0.995 - - - - - - - - 0.995 DnaJ (Hsp40) homolog, subfamily B, member 13 [Source:ZFIN;Acc:ZDB-GENE-040910-4]
92. PRKCA_1 ENSDARG00000099841 12 0.995 0.995 - - - - - - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
93. GPR180 73 0.995 0.995 - - - - - - - - G protein-coupled receptor 180, transcript variant X2
94. npy ENSDARG00000036222 14 0.995 - - 0.995 - - - - - - neuropeptide Y [Source:ZFIN;Acc:ZDB-GENE-980526-438]
95. SYTL1 ENSDARG00000070094 282 0.995 0.995 - - - - - - - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
96. si:ch211-76m11.15 ENSDARG00000098979 6 0.995 0.995 - - - - - - - - si:ch211-76m11.15 [Source:ZFIN;Acc:ZDB-GENE-110411-136]
97. pcmtd2 ENSDARG00000053820, ENSDARG00000113456 59 0.995 - - 0.995 - - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
98. cyp2x6 ENSDARG00000079653, ENSDARG00000111425 33 0.995 0.995 - - - - - - - - cytochrome P450, family 2, subfamily X, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-050320-144]
99. slc24a4b ENSDARG00000067509 33 0.995 0.995 - - - - - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 4b [Source:ZFIN;Acc:ZDB-GENE-081031-75]
100. si:dkey-199f5.6 ENSDARG00000094400 51 0.995 0.995 - - - - - - - - si:dkey-199f5.6 [Source:ZFIN;Acc:ZDB-GENE-100922-107]

There are 1167 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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