Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hsdl1

Gene Name Gene ID Reads Annotation
hsdl1 ENSDARG00000041736 171 hydroxysteroid dehydrogenase like 1 [Source:ZFIN;Acc:ZDB-GENE-041212-31]










Genes with expression patterns similar to hsdl1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hsdl1 ENSDARG00000041736 171 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 hydroxysteroid dehydrogenase like 1 [Source:ZFIN;Acc:ZDB-GENE-041212-31]
2. kcnk1a ENSDARG00000045067 743 2.392 - 0.772 - - - 0.819 0.801 - - potassium channel, subfamily K, member 1a [Source:ZFIN;Acc:ZDB-GENE-070620-26]
3. SUOX ENSDARG00000091574 122 2.365 - 0.721 - - - 0.709 0.935 - - sulfite oxidase [Source:ZFIN;Acc:ZDB-GENE-070718-3]
4. si:dkey-182g1.2 ENSDARG00000052680, ENSDARG00000109368 147 2.274 - 0.757 - - - - 0.817 - 0.700 si:dkey-182g1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-619]
5. ccrl1a ccrl1a 40 1.85 - 0.912 - - - - 0.938 - -
6. si:dkey-150k17.3 33 1.837 - 0.935 - - - 0.902 - - - si:dkey-150k17.3
7. rlbp1b ENSDARG00000045808, ENSDARG00000109856 282 1.813 1.000 - - - - - - - 0.813 retinaldehyde binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1870]
8. si:ch211-219f7.3 si:ch211-219f7.3 48 1.808 - - - - - 0.902 0.906 - -
9. BX537137.1 ENSDARG00000092436 77 1.798 - 0.903 - - - 0.895 - - - gastrula zinc finger protein XlCGF7.1 [Source:NCBI gene;Acc:100148466]
10. ulk4 ENSDARG00000004176 85 1.788 - 0.886 - - - - 0.902 - - unc-51 like kinase 4 [Source:ZFIN;Acc:ZDB-GENE-100922-243]
11. CABZ01073405.1 CABZ01073405.1 275 1.772 - 0.847 - - - - 0.925 - -
12. zgc:174651 zgc:174651 90 1.769 - - - - - 0.925 0.844 - -
13. si:ch211-284o19.8 ENSDARG00000053836 43 1.766 - - - - - 0.853 0.913 - - si:ch211-284o19.8 [Source:ZFIN;Acc:ZDB-GENE-070912-289]
14. inadl 80 1.765 - 0.835 - - - - 0.930 - - InaD-like (Drosophila), transcript variant X4
15. tlr7 ENSDARG00000068812, ENSDARG00000075685 30 1.759 - - - - - 0.865 0.894 - - toll-like receptor 7 [Source:ZFIN;Acc:ZDB-GENE-040219-11]
16. BAIAP2 BAIAP2 88 1.74 1.000 0.740 - - - - - - -
17. nptnb ENSDARG00000043864 165 1.733 0.842 0.891 - - - - - - - neuroplastin b [Source:ZFIN;Acc:ZDB-GENE-040426-1821]
18. FUZ ENSDARG00000079730 821 1.728 - 0.844 - - - - 0.884 - - fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
19. tmprss13b ENSDARG00000077573 47 1.725 - 0.887 - - - 0.838 - - - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
20. usp11 ENSDARG00000076303 183 1.713 - - - - - 0.819 0.894 - - ubiquitin specific peptidase 11 [Source:ZFIN;Acc:ZDB-GENE-081104-421]
21. stat2 ENSDARG00000031647, ENSDARG00000116348 441 1.7 - 0.822 - - - 0.878 - - - signal transducer and activator of transcription 2 [Source:ZFIN;Acc:ZDB-GENE-080321-1]
22. esyt1a ENSDARG00000034714 129 1.691 - 0.923 - - - 0.768 - - - extended synaptotagmin-like protein 1a [Source:ZFIN;Acc:ZDB-GENE-090311-55]
23. fastkd1 ENSDARG00000056128 141 1.689 - - - - - 0.758 0.931 - - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
24. tnfrsf1b ENSDARG00000070165 467 1.683 - 0.818 - - - 0.865 - - - tumor necrosis factor receptor superfamily, member 1B [Source:ZFIN;Acc:ZDB-GENE-070410-133]
25. smcr8a ENSDARG00000052818 559 1.682 - 0.715 - - - - 0.967 - - Smith-Magenis syndrome chromosome region, candidate 8a [Source:ZFIN;Acc:ZDB-GENE-071212-4]
26. LAMC2 ENSDARG00000068288 37 1.672 - - - - 0.756 - 0.916 - - laminin, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-110222-3]
27. pibf1 ENSDARG00000013006, ENSDARG00000015506 151 1.663 - - - - 0.759 0.904 - - - progesterone immunomodulatory binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-94]
28. si:ch211-207m11.3 si:ch211-207m11.3 401 1.662 0.715 - - - - - 0.947 - -
29. alg11 ENSDARG00000031202, ENSDARG00000110001 308 1.66 - - - - - - 0.880 - 0.780 asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-7282]
30. si:dkey-4c15.16 ENSDARG00000097261 154 1.649 - - - - - 0.765 0.884 - - si:dkey-4c15.16 [Source:ZFIN;Acc:ZDB-GENE-050420-215]
31. cenpi ENSDARG00000052565 482 1.647 - 0.738 - - - - 0.909 - - centromere protein I [Source:ZFIN;Acc:ZDB-GENE-060810-127]
32. kirrel3a ENSDARG00000075806 36 1.647 0.762 0.885 - - - - - - - kirre like nephrin family adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-091117-44]
33. INSM2 ENSDARG00000020655 122 1.639 0.852 - - - 0.787 - - - - INSM transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:17539]
34. sepsecs ENSDARG00000033861 478 1.638 0.730 - - - - - 0.908 - - Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase [Source:ZFIN;Acc:ZDB-GENE-040426-859]
35. CREB3L4 1085 1.636 - 0.840 - - - 0.796 - - - cAMP responsive element binding protein 3-like 4
36. trim25l ENSDARG00000020863 292 1.634 - - - - - 0.789 0.845 - - tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
37. dnph1 ENSDARG00000075730 403 1.633 - 0.817 - - - - 0.816 - - 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-5]
38. zgc:113452 ENSDARG00000074146 759 1.632 - - - - - 0.766 0.866 - - zgc:113452 [Source:ZFIN;Acc:ZDB-GENE-050913-16]
39. mmp9 ENSDARG00000042816 298 1.629 - - - - - 0.831 0.798 - - matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132]
40. tmem205 ENSDARG00000100677 101 1.628 - - - - - 0.878 0.750 - - transmembrane protein 205 [Source:ZFIN;Acc:ZDB-GENE-070112-1692]
41. mea1 ENSDARG00000039820 589 1.626 0.802 - - - - - 0.824 - - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
42. CU856237.1 CU856237.1 153 1.621 - 0.740 - - - 0.881 - - -
43. AKIP1 ENSDARG00000069037, ENSDARG00000111207, ENSDARG00000115020 351 1.618 - 0.740 - - - - 0.878 - - A kinase (PRKA) interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030829-24]
44. im:6904045 ENSDARG00000115174 179 1.617 - 0.908 - - - 0.709 - - - im:6904045 [Source:ZFIN;Acc:ZDB-GENE-050506-75]
45. IER2 IER2 604 1.608 - - - - - 0.803 0.805 - -
46. stx11a ENSDARG00000044039 39 1.608 - 0.903 0.705 - - - - - - syntaxin 11a [Source:ZFIN;Acc:ZDB-GENE-040426-2564]
47. fam151a ENSDARG00000058218 40 1.606 - 0.885 - - - 0.721 - - - family with sequence similarity 151, member A [Source:ZFIN;Acc:ZDB-GENE-070705-105]
48. btbd3b ENSDARG00000087517 107 1.593 - - 0.795 - - - - - 0.798 BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
49. taf1b ENSDARG00000028937 879 1.585 0.771 - - - - 0.814 - - - TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B [Source:ZFIN;Acc:ZDB-GENE-041008-2]
50. cbx4 ENSDARG00000099441 372 1.581 - 0.726 - - - - 0.855 - - chromobox homolog 4 (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040329-2]
51. arsh ENSDARG00000002299 331 1.581 - 0.794 - - - 0.787 - - - arylsulfatase H [Source:ZFIN;Acc:ZDB-GENE-081104-120]
52. rad18 ENSDARG00000027938 574 1.574 - - - - - 0.846 0.728 - - RAD18 E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-745]
53. NPFFR1 ENSDARG00000111997 29 1.573 0.802 - - - - - - - 0.771 neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
54. spint1b ENSDARG00000012467 97 1.572 - - - - - 0.720 0.852 - - serine peptidase inhibitor, Kunitz type 1 b [Source:ZFIN;Acc:ZDB-GENE-071218-1]
55. ZBTB8A ENSDARG00000059226 98 1.572 - - - - - 0.785 - - 0.787 zinc finger and BTB domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-060421-5153]
56. ZNF784_1 ZNF784_1 155 1.57 - 0.847 - - - 0.723 - - -
57. CABZ01039859.1 ENSDARG00000076361 540 1.569 - 0.805 0.764 - - - - - - beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
58. fam184a ENSDARG00000014081 93 1.568 0.819 - 0.749 - - - - - - family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
59. mtfr2 ENSDARG00000060394 482 1.567 - - - - - 0.826 0.741 - - mitochondrial fission regulator 2 [Source:ZFIN;Acc:ZDB-GENE-061013-398]
60. ptgs2b ENSDARG00000010276 692 1.561 - - - - - - 0.798 - 0.763 prostaglandin-endoperoxide synthase 2b [Source:ZFIN;Acc:ZDB-GENE-041014-323]
61. vps11 ENSDARG00000036338 421 1.56 - 0.841 - - - - 0.719 - - vacuolar protein sorting 11 [Source:ZFIN;Acc:ZDB-GENE-050731-5]
62. foxq1a ENSDARG00000030896 121 1.556 0.802 - - - - - - - 0.754 forkhead box Q1a [Source:ZFIN;Acc:ZDB-GENE-070424-74]
63. CCDC106 CCDC106 1908 1.554 - 0.772 - - - - 0.782 - -
64. gltpd1 gltpd1 377 1.551 - - - - - - 0.846 - 0.705
65. rapgef5a ENSDARG00000075271 282 1.55 - - - - - 0.833 - - 0.717 Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
66. si:ch211-225b11.1 ENSDARG00000002405 172 1.548 - 0.754 - - - 0.794 - - - si:ch211-225b11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-39]
67. slc12a10.2 ENSDARG00000071173 92 1.548 - 0.843 - - - 0.705 - - - solute carrier family 12 (sodium/potassium/chloride transporters), member 10, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-425]
68. strumpellin 212 1.546 - 0.784 - - - 0.762 - - - strumpellin
69. ndc1 ENSDARG00000021120 2417 1.546 - - - - - 0.718 0.828 - - NDC1 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-7176]
70. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1.536 0.802 - 0.734 - - - - - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
71. zgc:112437 ENSDARG00000009215 50 1.535 0.802 - 0.733 - - - - - - zgc:112437 [Source:ZFIN;Acc:ZDB-GENE-050417-293]
72. nrp2b ENSDARG00000038446 783 1.532 - - - - - 0.772 - - 0.760 neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
73. rcbtb1 ENSDARG00000036645 255 1.532 - 0.828 - - - 0.704 - - - regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7951]
74. sema3ga ENSDARG00000042545 1603 1.527 - 0.799 - - - - 0.728 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ga [Source:ZFIN;Acc:ZDB-GENE-050513-3]
75. acsl3a ENSDARG00000032079 897 1.525 - 0.726 - - - 0.799 - - - acyl-CoA synthetase long chain family member 3a [Source:ZFIN;Acc:ZDB-GENE-050420-181]
76. mon1a ENSDARG00000078585 554 1.521 - - - - - 0.778 0.743 - - MON1 secretory trafficking family member A [Source:ZFIN;Acc:ZDB-GENE-070615-6]
77. si:ch211-13f8.1 ENSDARG00000093342 274 1.516 0.709 - - - - - 0.807 - - si:ch211-13f8.1 [Source:ZFIN;Acc:ZDB-GENE-061207-4]
78. si:ch211-130m23.2 ENSDARG00000095136 121 1.513 - - - - - - 0.810 - 0.703 si:ch211-130m23.2 [Source:ZFIN;Acc:ZDB-GENE-060531-13]
79. olfml3b ENSDARG00000062171 264 1.512 - - - - - 0.793 0.719 - - olfactomedin-like 3b [Source:ZFIN;Acc:ZDB-GENE-050302-161]
80. itpk1 itpk1 425 1.507 - 0.786 - - - - 0.721 - -
81. CABZ01058048.1 CABZ01058048.1 268 1.499 0.726 - 0.773 - - - - - -
82. hoxd13a ENSDARG00000059256 1190 1.491 - 0.709 - - - 0.782 - - - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
83. zgc:66014 817 1.478 - 0.762 - - - 0.716 - - - zgc:66014, transcript variant X6
84. scamp2l ENSDARG00000017010 491 1.475 - - - - - 0.750 - - 0.725 secretory carrier membrane protein 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-6432]
85. fam213b ENSDARG00000029795 387 1.475 - 0.703 - - - 0.772 - - - family with sequence similarity 213, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2556]
86. CR388068.1 CR388068.1 481 1.466 - - - - - - 0.764 - 0.702
87. tgm5l ENSDARG00000098837 174 1.456 - - - - - 0.750 0.706 - - transglutaminase 5, like [Source:ZFIN;Acc:ZDB-GENE-110411-176]
88. tlk1b ENSDARG00000100715 1153 1.453 - 0.724 - - - 0.729 - - - tousled-like kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4933]
89. ikbkb ENSDARG00000079123 498 1.449 - - - - - 0.717 0.732 - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
90. lpcat4 ENSDARG00000035028 167 1.441 - 0.728 - - - - 0.713 - - lysophosphatidylcholine acyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5777]
91. gnb1b ENSDARG00000104372 1077 1.438 - 0.736 - - - - 0.702 - - guanine nucleotide binding protein (G protein), beta polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2855]
92. dhodh ENSDARG00000051889 401 1.424 - 0.722 - 0.702 - - - - - dihydroorotate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-3157]
93. eef1a1a ENSDARG00000039502 234 1 1.000 - - - - - - - - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
94. kcnab2b ENSDARG00000062134 80 1 1.000 - - - - - - - - potassium voltage-gated channel, shaker-related subfamily, beta member 2 b [Source:ZFIN;Acc:ZDB-GENE-080219-36]
95. cyp2u1 ENSDARG00000026548 85 1 1.000 - - - - - - - - cytochrome P450, family 2, subfamily U, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-070730-1]
96. si:rp71-45g20.6 si:rp71-45g20.6 19 1 1.000 - - - - - - - -
97. atp1a3b ENSDARG00000104139 14 1 1.000 - - - - - - - - ATPase Na+/K+ transporting subunit alpha 3b [Source:ZFIN;Acc:ZDB-GENE-001212-8]
98. si:dkeyp-109b10.4 si:dkeyp-109b10.4 23 1 1.000 - - - - - - - -
99. s100a1 ENSDARG00000015543 274 0.99 - - - - - - 0.990 - - S100 calcium binding protein A1 [Source:ZFIN;Acc:ZDB-GENE-040916-1]
100. pan3 ENSDARG00000031637, ENSDARG00000111004 613 0.982 - 0.982 - - - - - - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]

There are 1691 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA