Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hps4

Gene Name Gene ID Reads Annotation
hps4 ENSDARG00000013795 246 Hermansky-Pudlak syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1068]










Genes with expression patterns similar to hps4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hps4 ENSDARG00000013795 246 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Hermansky-Pudlak syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1068]
2. zgc:163061 ENSDARG00000075538, ENSDARG00000076766 54 1.649 0.804 0.845 - - - - - - - zgc:163061 [Source:ZFIN;Acc:ZDB-GENE-070410-132]
3. ep300a ENSDARG00000100666 224 1.645 - - - - - 0.748 0.897 - - E1A binding protein p300 a [Source:ZFIN;Acc:ZDB-GENE-080403-16]
4. si:dkey-1b17.5 ENSDARG00000101425 130 1.641 - 0.893 - - - - 0.748 - - si:dkey-1b17.5 [Source:ZFIN;Acc:ZDB-GENE-050208-704]
5. otof otof 127 1.623 - 0.899 - - - 0.724 - - -
6. ccdc146 ENSDARG00000004794 108 1.581 - 0.844 - - - - 0.737 - - coiled-coil domain containing 146 [Source:ZFIN;Acc:ZDB-GENE-041210-217]
7. slc12a7a ENSDARG00000073756 170 1.534 - 0.833 - - - 0.701 - - - solute carrier family 12 (potassium/chloride transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-070912-696]
8. KHDRBS3 ENSDARG00000101020 408 1.511 - 0.800 - 0.711 - - - - - KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
9. rab3da ENSDARG00000018107 28 1.508 - - - - - 0.718 0.790 - - RAB3D, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-080722-14]
10. LPIN3 LPIN3 121 1.506 - 0.794 - - - 0.712 - - -
11. GDPD4_1 GDPD4_1 190 1.497 - 0.790 - - - - 0.707 - -
12. flj11011l ENSDARG00000045360, ENSDARG00000114911 332 1.46 - - - 0.721 - 0.739 - - - hypothetical protein FLJ11011-like (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-050113-1]
13. PARP10 PARP10 385 1.429 - - 0.716 - - 0.713 - - -
14. lcor ENSDARG00000100908 291 1.413 - - - 0.701 - - 0.712 - - ligand dependent nuclear receptor corepressor [Source:ZFIN;Acc:ZDB-GENE-061201-6]
15. zmynd19 ENSDARG00000100773 224 0.947 - 0.947 - - - - - - - zinc finger, MYND-type containing 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4460]
16. MPPED1 ENSDARG00000088181 117 0.944 - 0.944 - - - - - - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
17. efcab11 ENSDARG00000043740 178 0.941 0.941 - - - - - - - - EF-hand calcium binding domain 11 [Source:ZFIN;Acc:ZDB-GENE-050417-348]
18. OCRL ENSDARG00000078106, ENSDARG00000115715, ENSDARG00000117019 317 0.938 - 0.938 - - - - - - - oculocerebrorenal syndrome of Lowe [Source:ZFIN;Acc:ZDB-GENE-061110-61]
19. si:dkey-193i10.3 si:dkey-193i10.3 70 0.937 - - - - - - 0.937 - -
20. zgc:174315 ENSDARG00000079222 180 0.934 - 0.934 - - - - - - - zgc:174315 [Source:ZFIN;Acc:ZDB-GENE-080219-29]
21. FAM84B ENSDARG00000032859, ENSDARG00000116831 127 0.933 - 0.933 - - - - - - - family with sequence similarity 84, member B [Source:ZFIN;Acc:ZDB-GENE-060929-1130]
22. tsen2 ENSDARG00000091851 1467 0.932 - - - - - - 0.932 - - TSEN2 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-060929-918]
23. snap25b ENSDARG00000058117 469 0.93 - 0.930 - - - - - - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
24. zgc:110821 ENSDARG00000077085 210 0.929 - 0.929 - - - - - - - zgc:110821 [Source:ZFIN;Acc:ZDB-GENE-050227-8]
25. ftr02 ENSDARG00000079412 47 0.928 - - - - - - 0.928 - - finTRIM family, member 2 [Source:ZFIN;Acc:ZDB-GENE-070424-5]
26. mir10b-2 116 0.926 - 0.926 - - - - - - - microRNA 10b-2
27. sorbs2a ENSDARG00000003046 242 0.926 - 0.926 - - - - - - - sorbin and SH3 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-070308-2]
28. SHF SHF 92 0.926 - 0.926 - - - - - - -
29. si:rp71-1g18.1 ENSDARG00000053792, ENSDARG00000111192 437 0.925 - 0.925 - - - - - - - si:rp71-1g18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5470]
30. RPH3A RPH3A 309 0.925 - 0.925 - - - - - - -
31. htra1a ENSDARG00000032831, ENSDARG00000111829 1008 0.924 - 0.924 - - - - - - - HtrA serine peptidase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-64]
32. idua ENSDARG00000062904 105 0.923 - 0.923 - - - - - - - iduronidase, alpha-L- [Source:ZFIN;Acc:ZDB-GENE-060526-29]
33. si:dkeyp-13a3.9 si:dkeyp-13a3.9 362 0.922 - 0.922 - - - - - - -
34. si:ch211-67e16.11 ENSDARG00000095580 635 0.921 - 0.921 - - - - - - - si:ch211-67e16.11 [Source:ZFIN;Acc:ZDB-GENE-030131-7044]
35. DNAJB14 ENSDARG00000069996 144 0.921 - 0.921 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 14 [Source:ZFIN;Acc:ZDB-GENE-061110-138]
36. KIF3A ENSDARG00000087538, ENSDARG00000109880, ENSDARG00000117005 95 0.92 - 0.920 - - - - - - - kinesin family member 3A [Source:ZFIN;Acc:ZDB-GENE-050417-71]
37. PDXK PDXK 224 0.92 - 0.920 - - - - - - -
38. nde1 ENSDARG00000103902 557 0.92 - 0.920 - - - - - - - nudE neurodevelopment protein 1 [Source:ZFIN;Acc:ZDB-GENE-050913-61]
39. CABZ01081897.1 ENSDARG00000110500 253 0.919 - 0.919 - - - - - - -
40. CABZ01114089.1 CABZ01114089.1 127 0.918 - - - - - - 0.918 - -
41. CR847998.1 ENSDARG00000104784 518 0.918 - 0.918 - - - - - - -
42. TGIF2 TGIF2 22 0.917 - 0.917 - - - - - - -
43. si:ch211-197n1.2 58 0.916 - 0.916 - - - - - - - si:ch211-197n1.2, transcript variant X1
44. NPBWR2 NPBWR2 132 0.915 - 0.915 - - - - - - -
45. sfmbt2 ENSDARG00000045519 251 0.915 - - - - - 0.915 - - - Scm like with four mbt domains 2 [Source:ZFIN;Acc:ZDB-GENE-041210-196]
46. zgc:55413 79 0.915 - 0.915 - - - - - - - zgc:55413
47. map3k4 ENSDARG00000104835 34 0.915 - 0.915 - - - - - - - mitogen-activated protein kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-990603-4]
48. agtr1b ENSDARG00000045443 232 0.914 - 0.914 - - - - - - - angiotensin II receptor, type 1b [Source:ZFIN;Acc:ZDB-GENE-110411-117]
49. NUMA1_2 NUMA1_2 2897 0.913 - 0.913 - - - - - - -
50. APOBEC2 APOBEC2 9 0.912 - 0.912 - - - - - - -
51. nceh1a ENSDARG00000020427 35 0.912 - 0.912 - - - - - - - neutral cholesterol ester hydrolase 1a [Source:ZFIN;Acc:ZDB-GENE-040711-2]
52. si:dkey-72l17.6 ENSDARG00000102008 42 0.911 - 0.911 - - - - - - - si:dkey-72l17.6 [Source:ZFIN;Acc:ZDB-GENE-110913-49]
53. STK31 ENSDARG00000056339 37 0.911 - 0.911 - - - - - - - serine/threonine kinase 31 [Source:ZFIN;Acc:ZDB-GENE-140106-59]
54. si:dkey-118k5.3 ENSDARG00000087736 155 0.909 - 0.909 - - - - - - - si:dkey-118k5.3 [Source:ZFIN;Acc:ZDB-GENE-121214-294]
55. gabrg2 ENSDARG00000053665 434 0.909 - 0.909 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
56. ttc5 ENSDARG00000013329, ENSDARG00000113967 219 0.908 - 0.908 - - - - - - - tetratricopeptide repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-050417-137]
57. tmie ENSDARG00000069423 305 0.907 - 0.907 - - - - - - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
58. gcgrb ENSDARG00000036272 54 0.907 - 0.907 - - - - - - - glucagon receptor b [Source:ZFIN;Acc:ZDB-GENE-050516-2]
59. TOB2 TOB2 254 0.907 - 0.907 - - - - - - -
60. DPEP3 DPEP3 53 0.906 - 0.906 - - - - - - -
61. pdxka ENSDARG00000088959 217 0.903 - 0.903 - - - - - - - pyridoxal (pyridoxine, vitamin B6) kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8376]
62. zgc:158856 zgc:158856 23 0.903 - 0.903 - - - - - - -
63. ZBTB11 ENSDARG00000017886 817 0.901 - 0.901 - - - - - - - zinc finger and BTB domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5055]
64. si:ch73-367f21.6 ENSDARG00000089953 46 0.901 - - - - - - 0.901 - - si:ch73-367f21.6 [Source:ZFIN;Acc:ZDB-GENE-120214-31]
65. atp8b1 ENSDARG00000060980 181 0.901 - 0.901 - - - - - - - ATPase phospholipid transporting 8B1 [Source:ZFIN;Acc:ZDB-GENE-091116-14]
66. si:ch211-76l23.5 si:ch211-76l23.5 26 0.9 - 0.900 - - - - - - -
67. mcm3 ENSDARG00000024204 20 0.9 - 0.900 - - - - - - - minichromosome maintenance complex component 3 [Source:ZFIN;Acc:ZDB-GENE-020419-4]
68. xdh ENSDARG00000055240 250 0.9 - 0.900 - - - - - - - xanthine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070719-9]
69. drc1 ENSDARG00000042182 39 0.899 - - - - - - 0.899 - - dynein regulatory complex subunit 1 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-041001-218]
70. parp16 ENSDARG00000018593 873 0.899 - 0.899 - - - - - - - poly (ADP-ribose) polymerase family, member 16 [Source:ZFIN;Acc:ZDB-GENE-040426-2289]
71. zgc:136254 ENSDARG00000068465 27 0.899 - 0.899 - - - - - - - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
72. APOLD1 APOLD1 56 0.899 - - - - - - 0.899 - -
73. bcl11aa ENSDARG00000061352 61 0.899 - - - - - - 0.899 - - B cell CLL/lymphoma 11Aa [Source:ZFIN;Acc:ZDB-GENE-060421-4643]
74. SLX1A SLX1A 15 0.899 - - - - - - 0.899 - -
75. dmrt2b ENSDARG00000070013, ENSDARG00000114365, ENSDARG00000114967 57 0.899 - - - - - - 0.899 - - doublesex and mab-3 related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-080813-1]
76. hic1 ENSDARG00000055493 219 0.899 - - - - - - 0.899 - - hypermethylated in cancer 1 [Source:ZFIN;Acc:ZDB-GENE-040713-2]
77. ccdc130 ENSDARG00000041533, ENSDARG00000113467 281 0.898 - 0.898 - - - - - - - coiled-coil domain containing 130 [Source:ZFIN;Acc:ZDB-GENE-040912-36]
78. slc25a35 ENSDARG00000102783 129 0.898 - 0.898 - - - - - - - solute carrier family 25, member 35 [Source:ZFIN;Acc:ZDB-GENE-060526-142]
79. rusc1 ENSDARG00000078125 617 0.898 - 0.898 - - - - - - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
80. CABZ01084942.1 ENSDARG00000100332 69 0.898 - 0.898 - - - - - - -
81. CLDND1 CLDND1 155 0.897 - 0.897 - - - - - - -
82. c1qtnf3 c1qtnf3 387 0.896 - 0.896 - - - - - - -
83. AL844567.1_1 AL844567.1_1 34 0.896 - - - - - - 0.896 - -
84. zgc:113220 ENSDARG00000014775 235 0.896 - 0.896 - - - - - - - zgc:113220 [Source:ZFIN;Acc:ZDB-GENE-050320-64]
85. MAGI3 MAGI3 114 0.896 - 0.896 - - - - - - -
86. adamts9 ENSDARG00000077778 419 0.894 - 0.894 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 9 [Source:ZFIN;Acc:ZDB-GENE-070814-6]
87. FKBP15 FKBP15 15 0.893 - 0.893 - - - - - - -
88. itln2_1 ENSDARG00000036084, ENSDARG00000093796, ENSDARG00000115958 3 0.893 - 0.893 - - - - - - - intelectin 2 [Source:NCBI gene;Acc:100007792]
89. CR847511.1 CR847511.1 80 0.893 - 0.893 - - - - - - -
90. olfml3a ENSDARG00000061852 139 0.893 - 0.893 - - - - - - - olfactomedin-like 3a [Source:ZFIN;Acc:ZDB-GENE-060825-31]
91. si:ch211-126g16.8 3 0.893 - 0.893 - - - - - - - si:ch211-126g16.8, transcript variant X1
92. RBM44 RBM44 25 0.893 - 0.893 - - - - - - -
93. cers4a ENSDARG00000031387 19 0.893 - 0.893 - - - - - - - ceramide synthase 4a [Source:ZFIN;Acc:ZDB-GENE-020808-1]
94. SSTR2 SSTR2 12 0.893 - 0.893 - - - - - - -
95. SOX8 SOX8 22 0.893 - 0.893 - - - - - - -
96. ndufs8b ENSDARG00000057055 10 0.893 - 0.893 - - - - - - - NADH:ubiquinone oxidoreductase core subunit S8b [Source:ZFIN;Acc:ZDB-GENE-050522-131]
97. epha8 22 0.893 - 0.893 - - - - - - - eph receptor A8
98. znf142 ENSDARG00000061373 47 0.893 - 0.893 - - - - - - - zinc finger protein 142 [Source:ZFIN;Acc:ZDB-GENE-080512-2]
99. BX569789.1 ENSDARG00000099678 4 0.893 - 0.893 - - - - - - - GTPase IMAP family member 4-like [Source:NCBI gene;Acc:571582]
100. MYO1C MYO1C 140 0.893 - 0.893 - - - - - - -

There are 820 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA