Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hps1

Gene Name Gene ID Reads Annotation
hps1 ENSDARG00000026170 131 Hermansky-Pudlak syndrome 1 [Source:ZFIN;Acc:ZDB-GENE-051113-152]










Genes with expression patterns similar to hps1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hps1 ENSDARG00000026170 131 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Hermansky-Pudlak syndrome 1 [Source:ZFIN;Acc:ZDB-GENE-051113-152]
2. hlfb ENSDARG00000061011 48 1.735 - 0.844 - - - - 0.891 - - hepatic leukemia factor b [Source:ZFIN;Acc:ZDB-GENE-110420-3]
3. slc5a8l ENSDARG00000003697, ENSDARG00000110685 69 1.615 0.846 - - - - 0.769 - - - solute carrier family 5 (iodide transporter), member 8-like [Source:ZFIN;Acc:ZDB-GENE-061110-98]
4. BX005423.3 BX005423.3 33 1.614 0.855 - - - - - 0.759 - -
5. GPR26 ENSDARG00000074389, ENSDARG00000116243 21 1.614 0.855 - - - - - 0.759 - - G protein-coupled receptor 26 [Source:ZFIN;Acc:ZDB-GENE-131121-131]
6. zgc:153921_1 ENSDARG00000020738, ENSDARG00000038405 19 1.605 0.846 - - - - - 0.759 - - zgc:153921 [Source:ZFIN;Acc:ZDB-GENE-060929-816]
7. foxj2 ENSDARG00000057680 73 1.541 0.797 - - - - - 0.744 - - forkhead box J2 [Source:ZFIN;Acc:ZDB-GENE-100922-240]
8. fbxl20 ENSDARG00000075567 138 1.539 0.800 - - - - - 0.739 - - F-box and leucine-rich repeat protein 20 [Source:ZFIN;Acc:ZDB-GENE-081031-27]
9. spata18 ENSDARG00000052343 216 1.534 - - - 0.781 - 0.753 - - - spermatogenesis associated 18 [Source:ZFIN;Acc:ZDB-GENE-050522-306]
10. znrf1 ENSDARG00000020475 303 1.525 0.702 - - 0.823 - - - - - zinc and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1905]
11. AL954146.5 AL954146.5 202 1.524 0.770 - - - - 0.754 - - -
12. foxd2 ENSDARG00000058133 1150 1.519 - - - - - 0.757 0.762 - - forkhead box D2 [Source:ZFIN;Acc:ZDB-GENE-980605-6]
13. nfkbie ENSDARG00000068367 314 1.497 - 0.729 - 0.768 - - - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon [Source:ZFIN;Acc:ZDB-GENE-061215-132]
14. hcst ENSDARG00000092074 172 1.466 0.717 - - 0.749 - - - - - hematopoietic cell signal transducer [Source:ZFIN;Acc:ZDB-GENE-061130-1]
15. CCDC23 CCDC23 54 1.449 - 0.735 - 0.714 - - - - -
16. si:ch211-207j7.2 ENSDARG00000090793 316 1.442 0.730 - - - - 0.712 - - - si:ch211-207j7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-232]
17. snx10b ENSDARG00000040474 29 1 - - - - - - 1.000 - - sorting nexin 10b [Source:ZFIN;Acc:ZDB-GENE-070628-1]
18. CST7 CST7 22 1 - - - - - - 1.000 - -
19. cnih3 ENSDARG00000014953 25 1 - - - - - - 1.000 - - cornichon family AMPA receptor auxiliary protein 3 [Source:ZFIN;Acc:ZDB-GENE-041001-180]
20. fbxo15 ENSDARG00000016897 18 1 - - - - - - 1.000 - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
21. gpc2 ENSDARG00000104217 10 1 - - - - - - 1.000 - - glypican 2 [Source:ZFIN;Acc:ZDB-GENE-050302-31]
22. zbtb1 ENSDARG00000023040, ENSDARG00000112571 211 0.967 - - - - - 0.967 - - - zinc finger and BTB domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041001-126]
23. CHCHD5 ENSDARG00000091754 35 0.955 - - - - - - 0.955 - - coiled-coil-helix-coiled-coil-helix domain containing 5 [Source:HGNC Symbol;Acc:HGNC:17840]
24. BX465841.1 BX465841.1 47 0.952 0.952 - - - - - - - -
25. bmb ENSDARG00000096603 120 0.944 - - - - - - 0.944 - - brambleberry [Source:ZFIN;Acc:ZDB-GENE-030131-5577]
26. si:ch211-245h7.2 si:ch211-245h7.2 317 0.94 0.940 - - - - - - - -
27. HNRNPUL2 HNRNPUL2 110 0.927 - - - - - - 0.927 - -
28. zgc:175008 zgc:175008 55 0.927 - - - - - - 0.927 - -
29. fam78a fam78a 238 0.921 - - - - - - 0.921 - -
30. PPFIBP1 PPFIBP1 46 0.919 - - - - - - 0.919 - -
31. cog6 ENSDARG00000103149 39 0.911 0.911 - - - - - - - - component of oligomeric golgi complex 6 [Source:ZFIN;Acc:ZDB-GENE-040426-909]
32. si:ch211-222k6.3 ENSDARG00000071578 127 0.908 - - - - - - 0.908 - - si:ch211-222k6.3 [Source:ZFIN;Acc:ZDB-GENE-050208-567]
33. si:dkey-204f11.49p si:dkey-204f11.49p 97 0.908 - - - - - - 0.908 - -
34. spdya ENSDARG00000059131 33 0.904 - - - - - - 0.904 - - speedy/RINGO cell cycle regulator family member A [Source:ZFIN;Acc:ZDB-GENE-041010-194]
35. cox5b2 ENSDARG00000068738 182 0.898 0.898 - - - - - - - - cytochrome c oxidase subunit 5B2 [Source:ZFIN;Acc:ZDB-GENE-060825-71]
36. dhrs1 ENSDARG00000054300, ENSDARG00000116842 555 0.895 0.895 - - - - - - - - dehydrogenase/reductase (SDR family) member 1 [Source:ZFIN;Acc:ZDB-GENE-030616-591]
37. ntf3 ENSDARG00000059043 355 0.894 0.894 - - - - - - - - neurotrophin 3 [Source:ZFIN;Acc:ZDB-GENE-031118-66]
38. camk2b1 ENSDARG00000011065 79 0.894 0.894 - - - - - - - - calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9588]
39. grk5l ENSDARG00000078815 222 0.892 - 0.892 - - - - - - - G protein-coupled receptor kinase 5 like [Source:ZFIN;Acc:ZDB-GENE-081105-95]
40. si:ch211-158c3.1 si:ch211-158c3.1 37 0.889 - - - - - - 0.889 - -
41. PMFBP1 ENSDARG00000101917 292 0.888 0.888 - - - - - - - - polyamine modulated factor 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-131127-619]
42. STRN ENSDARG00000100011 308 0.886 0.886 - - - - - - - - striatin, calmodulin binding protein [Source:ZFIN;Acc:ZDB-GENE-070112-1172]
43. ldhd ENSDARG00000038845 110 0.881 - 0.881 - - - - - - - lactate dehydrogenase D [Source:ZFIN;Acc:ZDB-GENE-030131-6140]
44. si:ch211-239f4.4 si:ch211-239f4.4 12 0.881 - - - - - - 0.881 - -
45. herc3 ENSDARG00000075887 41 0.88 0.880 - - - - - - - - HECT and RLD domain containing E3 ubiquitin protein ligase 3 [Source:ZFIN;Acc:ZDB-GENE-090313-139]
46. si:dkeyp-53d3.6 204 0.88 0.880 - - - - - - - - si:dkeyp-53d3.6, transcript variant X1
47. wu:fd58b11 wu:fd58b11 21 0.876 - - - - - - 0.876 - -
48. STPG2 ENSDARG00000061060 16 0.876 - - - - - - 0.876 - - sperm-tail PG-rich repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-061013-667]
49. dnajc28 ENSDARG00000018181, ENSDARG00000114383 134 0.875 - - - - - - 0.875 - - DnaJ (Hsp40) homolog, subfamily C, member 28 [Source:ZFIN;Acc:ZDB-GENE-050417-130]
50. mlh3 ENSDARG00000056334 142 0.871 0.871 - - - - - - - - mutL homolog 3 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-060810-45]
51. alkbh4 ENSDARG00000052247 306 0.87 - - - - - 0.870 - - - alkB homolog 4, lysine demthylase [Source:ZFIN;Acc:ZDB-GENE-060526-275]
52. BX649554.3_1 BX649554.3_1 1071 0.869 0.869 - - - - - - - -
53. NETO2_1 NETO2_1 15 0.869 - - - - - - 0.869 - -
54. baiap2a ENSDARG00000062799 231 0.868 - - - - - - 0.868 - - BAI1-associated protein 2a [Source:ZFIN;Acc:ZDB-GENE-060421-2756]
55. si:dkeyp-117b11.2 ENSDARG00000076419 143 0.867 0.867 - - - - - - - - si:dkeyp-117b11.2 [Source:ZFIN;Acc:ZDB-GENE-081104-454]
56. CT955963.1 ENSDARG00000100370 23 0.866 - - - - - - 0.866 - -
57. dnajb9a ENSDARG00000052072 578 0.864 0.864 - - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
58. lpar5a ENSDARG00000010384 29 0.862 - - - - - - 0.862 - - lysophosphatidic acid receptor 5a [Source:ZFIN;Acc:ZDB-GENE-030131-1193]
59. si:ch211-198n5.11 ENSDARG00000054400, ENSDARG00000112640 97 0.862 0.862 - - - - - - - - si:ch211-198n5.11 [Source:ZFIN;Acc:ZDB-GENE-050411-52]
60. meig1 ENSDARG00000045705, ENSDARG00000114008, ENSDARG00000115242 570 0.861 - - - - - 0.861 - - - meiosis/spermiogenesis associated 1 [Source:ZFIN;Acc:ZDB-GENE-050320-33]
61. NUDT7 ENSDARG00000070387 32 0.861 - - - - - - 0.861 - - nudix (nucleoside diphosphate linked moiety X)-type motif 7 [Source:ZFIN;Acc:ZDB-GENE-131127-212]
62. gng12a ENSDARG00000003375 1250 0.86 - - - - - 0.860 - - - guanine nucleotide binding protein (G protein), gamma 12a [Source:ZFIN;Acc:ZDB-GENE-040426-2555]
63. CU424462.2 CU424462.2 73 0.859 - - - 0.859 - - - - -
64. lss ENSDARG00000061274 68 0.858 - - - - - - 0.858 - - lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [Source:ZFIN;Acc:ZDB-GENE-050119-7]
65. FHAD1 ENSDARG00000056723, ENSDARG00000116072 406 0.857 - - - 0.857 - - - - - forkhead-associated (FHA) phosphopeptide binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-041210-354]
66. slc24a1 ENSDARG00000041431 33 0.857 - - - - - - 0.857 - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 [Source:ZFIN;Acc:ZDB-GENE-060503-191]
67. BAD BAD 1322 0.855 0.855 - - - - - - - -
68. grin2db ENSDARG00000070620 101 0.855 0.855 - - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2D, b [Source:ZFIN;Acc:ZDB-GENE-100920-7]
69. si:dkey-189d19.2 si:dkey-189d19.2 45 0.855 0.855 - - - - - - - -
70. dbh ENSDARG00000069446, ENSDARG00000114942 60 0.855 0.855 - - - - - - - - dopamine beta-hydroxylase (dopamine beta-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-990621-3]
71. COL26A1 COL26A1 9 0.855 0.855 - - - - - - - -
72. FHDC1_1 FHDC1_1 136 0.85 - 0.850 - - - - - - -
73. klfd klfd 625 0.848 - - - - - - 0.848 - -
74. fhl2a ENSDARG00000042018 244 0.847 - 0.847 - - - - - - - four and a half LIM domains 2a [Source:ZFIN;Acc:ZDB-GENE-040808-49]
75. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 0.847 0.847 - - - - - - - - ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
76. otx1a 1607 0.846 0.846 - - - - - - - - orthodenticle homeobox 1a
77. nr1h4 ENSDARG00000057741, ENSDARG00000113600 24 0.846 0.846 - - - - - - - - nuclear receptor subfamily 1, group H, member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-313]
78. ENSDARG00000089152 ENSDARG00000089152 12 0.846 0.846 - - - - - - - -
79. stk33 ENSDARG00000054318, ENSDARG00000114909 34 0.846 0.846 - - - - - - - - serine/threonine kinase 33 [Source:ZFIN;Acc:ZDB-GENE-040724-242]
80. fam166b ENSDARG00000100292 14 0.846 0.846 - - - - - - - - family with sequence similarity 166, member B [Source:ZFIN;Acc:ZDB-GENE-070209-41]
81. si:ch211-196c10.13 ENSDARG00000096756 28 0.846 0.846 - - - - - - - - si:ch211-196c10.13 [Source:ZFIN;Acc:ZDB-GENE-130603-71]
82. C11H1orf116 C11H1orf116 9 0.846 0.846 - - - - - - - -
83. rasal3 ENSDARG00000089933 17 0.846 0.846 - - - - - - - - RAS protein activator like 3 [Source:ZFIN;Acc:ZDB-GENE-101130-3]
84. lamb1a_1 ENSDARG00000101209 13 0.846 0.846 - - - - - - - - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
85. PLB1 PLB1 20 0.846 0.846 - - - - - - - -
86. socs1a ENSDARG00000038095 20 0.846 0.846 - - - - - - - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
87. C5H9orf9 C5H9orf9 6 0.846 0.846 - - - - - - - -
88. rgs13 ENSDARG00000017653 8 0.846 0.846 - - - - - - - - regulator of G protein signaling 13 [Source:ZFIN;Acc:ZDB-GENE-070410-138]
89. col19a1 ENSDARG00000076163, ENSDARG00000096073 356 0.846 0.846 - - - - - - - - collagen, type XIX, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090312-196]
90. fnbp1 fnbp1 5 0.846 0.846 - - - - - - - -
91. nipa1 ENSDARG00000055917 132 0.846 0.846 - - - - - - - - NIPA magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-041010-164]
92. si:dkey-162h11.2 si:dkey-162h11.2 257 0.846 0.846 - - - - - - - -
93. tacr2 ENSDARG00000074509, ENSDARG00000109849, ENSDARG00000112566 4 0.846 0.846 - - - - - - - - tachykinin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-188]
94. USP53 USP53 5 0.846 0.846 - - - - - - - -
95. pcolce2b ENSDARG00000055575 2 0.846 0.846 - - - - - - - - procollagen C-endopeptidase enhancer 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1177]
96. mir30b 4 0.846 0.846 - - - - - - - - microRNA 30b
97. C10H5orf42 C10H5orf42 5 0.846 0.846 - - - - - - - -
98. CU915778.2 CU915778.2 194 0.846 0.846 - - - - - - - -
99. si:dkey-3d18.5 ENSDARG00000096239 3 0.846 0.846 - - - - - - - - si:dkey-3d18.5 [Source:ZFIN;Acc:ZDB-GENE-120215-143]
100. BX601644.1 ENSDARG00000090632 2 0.846 0.846 - - - - - - - - cytokine receptor-like factor 2 [Source:NCBI gene;Acc:100294510]

There are 588 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA