Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hpdb

Gene Name Gene ID Reads Annotation
hpdb ENSDARG00000044935, ENSDARG00000115001 75 4-hydroxyphenylpyruvate dioxygenase b [Source:ZFIN;Acc:ZDB-GENE-040808-62]










Genes with expression patterns similar to hpdb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hpdb ENSDARG00000044935, ENSDARG00000115001 75 6 - - 1.000 1.000 1.000 1.000 - 1.000 1.000 4-hydroxyphenylpyruvate dioxygenase b [Source:ZFIN;Acc:ZDB-GENE-040808-62]
2. gsto1 ENSDARG00000022183 13 1.86 - - 0.985 - - 0.875 - - - glutathione S-transferase omega 1 [Source:ZFIN;Acc:ZDB-GENE-040718-365]
3. FAM83H FAM83H 190 1.792 - - - 0.917 - 0.875 - - -
4. FNDC7_2 FNDC7_2 18 1.702 - - - 0.905 0.797 - - - -
5. si:ch211-149a19.3 ENSDARG00000079456 115 1.691 - - 0.840 - - 0.851 - - - si:ch211-149a19.3 [Source:ZFIN;Acc:ZDB-GENE-081104-128]
6. CCDC15 ENSDARG00000067517 28 1.65 - - 0.909 - 0.741 - - - - coiled-coil domain containing 15 [Source:ZFIN;Acc:ZDB-GENE-120411-25]
7. sp5l ENSDARG00000115868 361 1.646 - - - - - 0.835 - 0.811 - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
8. guca1a ENSDARG00000010454 9 1.583 - - - - 0.797 - - 0.786 - guanylate cyclase activator 1A [Source:ZFIN;Acc:ZDB-GENE-011128-5]
9. CU183952.1 CU183952.1 32 1.532 - - 0.752 - - - - 0.780 -
10. dhrs13l1 ENSDARG00000098746 102 1.496 - - - - - - - 0.748 0.748 dehydrogenase/reductase (SDR family) member 13 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1907]
11. tysnd1 ENSDARG00000074895 85 1.46 - - - - - 0.753 - 0.707 - trypsin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8525]
12. si:dkey-19c16.1 si:dkey-19c16.1 2 1 - - - - 1.000 - - - -
13. sumo2a ENSDARG00000104390 4 1 - - - - 1.000 - - - - small ubiquitin-like modifier 2a [Source:ZFIN;Acc:ZDB-GENE-120215-155]
14. zgc:171544 zgc:171544 11 1 - - - - 1.000 - - - -
15. pla2g1b ENSDARG00000009153 3 0.986 - - 0.986 - - - - - - phospholipase A2, group IB (pancreas) [Source:ZFIN;Acc:ZDB-GENE-070117-1]
16. plekhs1 ENSDARG00000079227 4 0.986 - - 0.986 - - - - - - pleckstrin homology domain containing, family S member 1 [Source:ZFIN;Acc:ZDB-GENE-080204-50]
17. jak3 ENSDARG00000010252 11 0.986 - - 0.986 - - - - - - Janus kinase 3 (a protein tyrosine kinase, leukocyte) [Source:ZFIN;Acc:ZDB-GENE-070725-4]
18. si:dkey-234l24.7_1 ENSDARG00000113738 4 0.986 - - 0.986 - - - - - - si:dkey-234l24.7 [Source:ZFIN;Acc:ZDB-GENE-050420-90]
19. abcg2b ENSDARG00000079361, ENSDARG00000110043 11 0.986 - - 0.986 - - - - - - ATP-binding cassette, sub-family G (WHITE), member 2b [Source:ZFIN;Acc:ZDB-GENE-050517-36]
20. slc25a28 ENSDARG00000052994, ENSDARG00000113235 2 0.986 - - 0.986 - - - - - - solute carrier family 25 (mitochondrial iron transporter), member 28 [Source:ZFIN;Acc:ZDB-GENE-040426-2125]
21. slc25a28_1 ENSDARG00000052994, ENSDARG00000113235 2 0.986 - - 0.986 - - - - - - solute carrier family 25 (mitochondrial iron transporter), member 28 [Source:ZFIN;Acc:ZDB-GENE-040426-2125]
22. Vault Vault 3 0.986 - - 0.986 - - - - - -
23. XPO5 ENSDARG00000098868 3 0.986 - - 0.986 - - - - - - exportin 5 [Source:HGNC Symbol;Acc:HGNC:17675]
24. lcp2b ENSDARG00000036215 15 0.986 - - 0.986 - - - - - - lymphocyte cytosolic protein 2b [Source:ZFIN;Acc:ZDB-GENE-081107-21]
25. cyb561a3b ENSDARG00000028257 60 0.986 - - 0.986 - - - - - - cytochrome b561 family, member A3b [Source:ZFIN;Acc:ZDB-GENE-091204-222]
26. epha8 22 0.986 - - 0.986 - - - - - - eph receptor A8
27. ptprq ENSDARG00000008849 3 0.986 - - 0.986 - - - - - - protein tyrosine phosphatase, receptor type, Q [Source:ZFIN;Acc:ZDB-GENE-050419-183]
28. si:ch73-44m9.3 ENSDARG00000040640, ENSDARG00000100357 3 0.985 - - 0.985 - - - - - - si:ch73-44m9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-290]
29. fam228a ENSDARG00000042936, ENSDARG00000114092 30 0.985 - - 0.985 - - - - - - family with sequence similarity 228, member A [Source:ZFIN;Acc:ZDB-GENE-041014-83]
30. tdo2b ENSDARG00000023176 8 0.98 - - 0.980 - - - - - - tryptophan 2,3-dioxygenase b [Source:ZFIN;Acc:ZDB-GENE-030131-6014]
31. SLC35A3_1 SLC35A3_1 35 0.975 - - 0.975 - - - - - -
32. slc12a8 ENSDARG00000074384 12 0.975 - - 0.975 - - - - - - solute carrier family 12, member 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5654]
33. si:dkey-237j10.2 ENSDARG00000094025 3 0.975 - - 0.975 - - - - - - si:dkey-237j10.2 [Source:ZFIN;Acc:ZDB-GENE-100922-206]
34. tnni3k ENSDARG00000086933 37 0.975 - - 0.975 - - - - - - TNNI3 interacting kinase [Source:ZFIN;Acc:ZDB-GENE-081104-399]
35. si:ch211-153l6.4 si:ch211-153l6.4 45 0.974 - - 0.974 - - - - - -
36. alkbh7 ENSDARG00000037906 9 0.971 - - 0.971 - - - - - - alkB homolog 7 [Source:ZFIN;Acc:ZDB-GENE-050417-78]
37. C13H2orf50 C13H2orf50 87 0.963 - - - - - - - 0.963 -
38. si:dkeyp-46h3.8 ENSDARG00000093704 9 0.961 - - 0.961 - - - - - - si:dkeyp-46h3.8 [Source:ZFIN;Acc:ZDB-GENE-060503-183]
39. BX927082.1 ENSDARG00000103873 2 0.959 - - 0.959 - - - - - -
40. kcnk5b ENSDARG00000012390 294 0.957 - - - - - - - 0.957 - potassium channel, subfamily K, member 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1297]
41. flot1a ENSDARG00000001710 36 0.954 - - 0.954 - - - - - - flotillin 1a [Source:ZFIN;Acc:ZDB-GENE-020430-1]
42. sh3gl1b ENSDARG00000002642, ENSDARG00000113208 61 0.949 - - - - - 0.949 - - - SH3-domain GRB2-like 1b [Source:ZFIN;Acc:ZDB-GENE-031001-6]
43. AKNA ENSDARG00000087110 39 0.949 - - - - - 0.949 - - - AT-hook transcription factor [Source:ZFIN;Acc:ZDB-GENE-091204-170]
44. trim35-3_1 ENSDARG00000052255 6 0.944 - - 0.944 - - - - - - tripartite motif containing 35-3 [Source:ZFIN;Acc:ZDB-GENE-070912-56]
45. CABZ01053483.1 CABZ01053483.1 5 0.941 - - - - 0.941 - - - -
46. CR792418.1 CR792418.1 1 0.941 - - - - 0.941 - - - -
47. nsun5_1 ENSDARG00000043209 3 0.941 - - - - 0.941 - - - - NOP2/Sun domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2476]
48. ankrd52a ENSDARG00000036826, ENSDARG00000112185 7 0.941 - - - - 0.941 - - - - ankyrin repeat domain 52a [Source:ZFIN;Acc:ZDB-GENE-050522-247]
49. arr3a ENSDARG00000056511, ENSDARG00000114648 192 0.941 - - - - 0.941 - - - - arrestin 3a, retinal (X-arrestin) [Source:ZFIN;Acc:ZDB-GENE-040718-102]
50. si:dkey-34e4.1 ENSDARG00000022085 5 0.94 - - 0.940 - - - - - - si:dkey-34e4.1 [Source:ZFIN;Acc:ZDB-GENE-070705-456]
51. crfb12 ENSDARG00000052413 47 0.938 - - 0.938 - - - - - - cytokine receptor family member B12 [Source:ZFIN;Acc:ZDB-GENE-060421-4184]
52. SUN2 SUN2 86 0.937 - - 0.937 - - - - - -
53. dennd2db ENSDARG00000030250 24 0.935 - - 0.935 - - - - - - DENN/MADD domain containing 2Db [Source:ZFIN;Acc:ZDB-GENE-041114-34]
54. si:ch211-284e13.5 ENSDARG00000094725 68 0.935 - - - - - 0.935 - - - si:ch211-284e13.5 [Source:ZFIN;Acc:ZDB-GENE-060526-162]
55. C10H11orf63 C10H11orf63 65 0.931 - - - - - - - 0.931 -
56. acer3 ENSDARG00000093366 7 0.924 - - 0.924 - - - - - - alkaline ceramidase 3 [Source:ZFIN;Acc:ZDB-GENE-091204-155]
57. kitlgb ENSDARG00000058042, ENSDARG00000116557 63 0.92 - - - - - 0.920 - - - kit ligand b [Source:ZFIN;Acc:ZDB-GENE-070424-2]
58. mir92b 95 0.918 - - - - - 0.918 - - - microRNA 92b
59. MLLT1 MLLT1 349 0.914 - - - - - - - 0.914 -
60. znf516 ENSDARG00000070809 65 0.913 - - - - - 0.913 - - - zinc finger protein 516 [Source:ZFIN;Acc:ZDB-GENE-060503-194]
61. zymnd12 17 0.911 - - 0.911 - - - - - - zinc finger, MYND-type containing 12, transcript variant X1
62. si:ch211-233h19.2 ENSDARG00000042213 47 0.908 - - - - 0.908 - - - - si:ch211-233h19.2 [Source:ZFIN;Acc:ZDB-GENE-061009-14]
63. si:ch211-214j24.15 ENSDARG00000063481 8 0.903 - - - - - 0.903 - - - si:ch211-214j24.15 [Source:ZFIN;Acc:ZDB-GENE-110914-85]
64. dctn1a ENSDARG00000019743 45 0.903 - - - - - 0.903 - - - dynactin 1a [Source:ZFIN;Acc:ZDB-GENE-070117-2205]
65. ptar1 ENSDARG00000102338 511 0.897 - - - - - - - 0.897 - protein prenyltransferase alpha subunit repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-060526-17]
66. si:dkey-29d8.3 ENSDARG00000091879 21 0.895 - - 0.895 - - - - - - si:dkey-29d8.3 [Source:ZFIN;Acc:ZDB-GENE-070912-508]
67. rabl5 rabl5 245 0.895 - - - - - - - 0.895 -
68. tmem179b ENSDARG00000069495 17 0.892 - - 0.892 - - - - - - transmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]
69. CR932000.1 ENSDARG00000097733 40 0.888 - - - - - 0.888 - - -
70. EMILIN3 1347 0.888 - - - - - - - 0.888 - elastin microfibril interfacer 3
71. CSGALNACT1 CSGALNACT1 116 0.887 - - - - - 0.887 - - -
72. CU633988.1 CU633988.1 97 0.885 - - - - - 0.885 - - -
73. PKP3 PKP3 391 0.884 - - - - - 0.884 - - -
74. gbp4 ENSDARG00000068857, ENSDARG00000112635 55 0.882 - - - - - - - 0.882 - guanylate binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-060531-46]
75. leprel4 leprel4 34 0.879 - - - - 0.879 - - - -
76. si:dkey-30c15.12 ENSDARG00000058546 12 0.877 - - - - - 0.877 - - - si:dkey-30c15.12 [Source:ZFIN;Acc:ZDB-GENE-060503-920]
77. TEP1 ENSDARG00000038713 289 0.876 - - - - - 0.876 - - - telomerase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6153]
78. amy2a ENSDARG00000013856 13 0.875 - - - - - 0.875 - - - amylase, alpha 2A (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040426-2393]
79. sdhda ENSDARG00000055712 50 0.875 - - - - - 0.875 - - - succinate dehydrogenase complex, subunit D, integral membrane protein a [Source:ZFIN;Acc:ZDB-GENE-040718-192]
80. hrh3 ENSDARG00000035942 32 0.875 - - - - - 0.875 - - - histamine receptor H3 [Source:ZFIN;Acc:ZDB-GENE-040724-204]
81. rln1 ENSDARG00000103762 8 0.875 - - - - - 0.875 - - - relaxin 1 [Source:ZFIN;Acc:ZDB-GENE-120215-201]
82. mcm5_2 ENSDARG00000019507 66 0.875 - - - - - 0.875 - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
83. GBF1 ENSDARG00000027016 30 0.875 - - - - - 0.875 - - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-081107-54]
84. il11b ENSDARG00000058557 17 0.875 - - - - - 0.875 - - - interleukin 11b [Source:ZFIN;Acc:ZDB-GENE-051019-2]
85. urad ENSDARG00000071579, ENSDARG00000115541 46 0.875 - - - - - 0.875 - - - ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070112-472]
86. si:ch211-14a17.6 ENSDARG00000054313, ENSDARG00000116347 12 0.875 - - - - - 0.875 - - - si:ch211-14a17.6 [Source:ZFIN;Acc:ZDB-GENE-030616-589]
87. CA4_1 CA4_1 3 0.875 - - - - - 0.875 - - -
88. gsg1l ENSDARG00000037390 181 0.875 - - - - - 0.875 - - - gsg1-like [Source:ZFIN;Acc:ZDB-GENE-050913-27]
89. si:dkey-58f10.12 ENSDARG00000092680 258 0.875 - - - - - 0.875 - - - si:dkey-58f10.12 [Source:ZFIN;Acc:ZDB-GENE-060526-314]
90. stx7l ENSDARG00000069208, ENSDARG00000112283 343 0.875 - - - - - 0.875 - - - syntaxin 7-like [Source:ZFIN;Acc:ZDB-GENE-041014-35]
91. kcnh4 kcnh4 6 0.875 - - - - - 0.875 - - -
92. si:ch1073-307h15.1 si:ch1073-307h15.1 2 0.875 - - - - - 0.875 - - -
93. cldn15b ENSDARG00000101109 4 0.875 - - - - - 0.875 - - - claudin 15b [Source:ZFIN;Acc:ZDB-GENE-060421-7652]
94. si:ch211-114l13.4 ENSDARG00000078246 2 0.875 - - - - - 0.875 - - - si:ch211-114l13.4 [Source:ZFIN;Acc:ZDB-GENE-070424-113]
95. zgc:172218 ENSDARG00000089869, ENSDARG00000110419 3 0.875 - - - - - 0.875 - - - zgc:172218 [Source:NCBI gene;Acc:793798]
96. si:dkey-78a14.4 ENSDARG00000036066 17 0.875 - - - - - 0.875 - - - si:dkey-78a14.4 [Source:ZFIN;Acc:ZDB-GENE-110408-8]
97. arl10 37 0.875 - - - - - 0.875 - - - ADP-ribosylation factor-like 10
98. taok3a ENSDARG00000060751 254 0.875 - - - - - 0.875 - - - TAO kinase 3a [Source:ZFIN;Acc:ZDB-GENE-100921-50]
99. il1b ENSDARG00000098700 27 0.875 - - - - - 0.875 - - - interleukin 1, beta [Source:ZFIN;Acc:ZDB-GENE-040702-2]
100. paqr7a ENSDARG00000100462 15 0.875 - - - - - 0.875 - - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]

There are 593 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA