Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for hpca

Gene Name Gene ID Reads Annotation
hpca ENSDARG00000018397, ENSDARG00000110115 3866 hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]










Genes with expression patterns similar to hpca

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hpca ENSDARG00000018397, ENSDARG00000110115 3866 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
2. slc1a2b ENSDARG00000102453 3136 4.447 0.947 0.824 - - 0.881 0.866 0.929 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
3. scrt2 ENSDARG00000056175 4331 4.436 0.905 0.784 - - 0.931 0.906 0.910 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
4. nova2 ENSDARG00000017673 7685 3.951 0.800 0.726 - - 0.742 0.720 0.963 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
5. TUSC5 TUSC5 1436 3.681 0.972 0.828 - - - 0.983 0.898 - -
6. syt11a ENSDARG00000057913 1145 3.626 0.870 0.882 - - - 0.958 0.916 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
7. nptx1l ENSDARG00000074671 569 3.622 0.828 0.920 - - - 0.977 0.897 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
8. nrn1a ENSDARG00000071860 1311 3.61 0.920 0.786 - - - 0.968 0.936 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
9. stmn2a ENSDARG00000033234 2272 3.607 0.975 0.731 - - - 0.972 0.929 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
10. amph ENSDARG00000007663 599 3.572 0.951 0.802 - - - 0.877 0.942 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
11. dpysl3 ENSDARG00000002587 4381 3.566 0.942 - - - 0.941 0.737 0.946 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
12. zic1 ENSDARG00000015567 2520 3.542 0.938 0.763 - - - 0.965 0.876 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
13. snap25a ENSDARG00000020609 4537 3.54 0.963 0.748 - - - 0.890 0.939 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
14. stx1b ENSDARG00000000503 2724 3.529 0.909 0.853 - - - 0.825 0.942 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
15. zic4 ENSDARG00000031307 1228 3.527 0.892 0.879 - - - 0.939 0.817 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
16. mapk12b ENSDARG00000006409 2246 3.526 0.854 0.756 - - - 0.952 0.964 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
17. gap43 ENSDARG00000099744 4114 3.522 0.983 0.707 - - - 0.896 0.936 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
18. scn8aa ENSDARG00000005775 792 3.52 0.943 0.808 - - - 0.836 0.933 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
19. slc1a3a ENSDARG00000104431 9888 3.509 0.938 0.733 - - - 0.909 0.929 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
20. atp2b3b ENSDARG00000023445 1424 3.502 0.933 0.706 - - - 0.978 0.885 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
21. MAP6 MAP6 643 3.49 0.851 0.851 - - - 0.887 0.901 - -
22. SV2B SV2B 208 3.488 0.920 0.802 - - - 0.919 0.847 - -
23. pcsk1nl ENSDARG00000076170 1232 3.473 0.797 0.802 - - - 0.954 0.920 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
24. TUBB8P7_1 TUBB8P7_1 2722 3.472 0.946 0.737 - - - 0.889 0.900 - -
25. MAP1A MAP1A 847 3.47 0.923 0.752 - - - 0.909 0.886 - -
26. cadm3 ENSDARG00000057013 1545 3.463 0.919 0.769 - - - 0.904 0.871 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
27. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 3.441 0.735 0.850 - - - 0.908 0.948 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
28. rbfox3 rbfox3 1443 3.433 0.917 0.865 - - - 0.708 0.943 - -
29. rtn1b ENSDARG00000021143 1682 3.423 0.862 0.710 - - - 0.926 0.925 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
30. pcdh1gc5 ENSDARG00000104826 10052 3.421 0.847 0.709 - - - 0.925 0.940 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
31. sox2 ENSDARG00000070913 2763 3.416 0.784 0.787 - - - 0.916 0.929 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
32. si:ch73-21g5.7 ENSDARG00000093156 9412 3.41 0.736 0.777 - - - 0.934 0.963 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
33. ZFHX3 ENSDARG00000103057 7759 3.395 0.891 - - - 0.775 0.798 0.931 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
34. tnika ENSDARG00000056218 728 3.392 0.830 0.766 - - - 0.944 0.852 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
35. slc32a1 ENSDARG00000059775 1092 3.381 0.838 0.711 - - - 0.885 0.947 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
36. calb1 ENSDARG00000031598 252 3.374 0.848 0.777 - - - 0.833 0.916 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
37. KCNAB2 KCNAB2 129 3.362 0.929 0.777 - - - 0.838 0.818 - -
38. sez6l2 ENSDARG00000076052 360 3.362 0.709 0.761 - - - 0.979 0.913 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
39. slc17a6b ENSDARG00000041150 823 3.347 0.723 0.777 - - - 0.912 0.935 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
40. TUBB2A TUBB2A 142 3.343 0.871 0.777 - - - 0.931 0.764 - -
41. vsnl1a ENSDARG00000023228 1584 3.324 0.795 0.731 - - - 0.971 0.827 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
42. cacna2d3 ENSDARG00000078760 211 3.315 0.935 0.757 - - - 0.889 0.734 - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
43. entpd3 ENSDARG00000035309 263 3.299 0.814 0.849 - - - 0.932 0.704 - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
44. rap2ip rap2ip 681 3.271 0.724 0.761 - - - 0.858 0.928 - -
45. nadl1.1 1200 3.242 0.833 0.746 - - - 0.748 0.915 - - neural adhesion molecule L1.1, transcript variant X1
46. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 3.177 0.775 0.723 - - - 0.738 0.941 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
47. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 3.133 0.823 0.702 - - - 0.849 0.759 - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
48. stxbp5a ENSDARG00000002656 318 3.111 0.752 0.715 - - - 0.776 0.868 - - syntaxin binding protein 5a (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-041001-161]
49. stmn1b ENSDARG00000033655 9491 2.903 0.951 - - - - 0.991 0.961 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
50. gnao1a ENSDARG00000016676 8184 2.85 0.905 - - - 0.984 - 0.961 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
51. lhx5 ENSDARG00000057936 785 2.812 0.956 - - - - 0.974 0.882 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
52. mdkb ENSDARG00000020708 5393 2.803 0.959 - - - - 0.984 0.860 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
53. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.788 0.876 - - - - 0.948 0.964 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
54. ppp3ca ENSDARG00000004988 615 2.778 0.907 - - - - 0.941 0.930 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
55. pnoca ENSDARG00000025024 467 2.76 0.950 - - - - 0.970 0.840 - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
56. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 2.76 0.859 - - - - 0.982 0.919 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
57. eno2 ENSDARG00000014287 2162 2.75 0.869 - - - - 0.935 0.946 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
58. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.75 0.915 - - - - 0.895 0.940 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
59. KIF1A KIF1A 1686 2.746 0.808 - - - 0.975 - 0.963 - -
60. cers6 ENSDARG00000053583 247 2.744 0.891 - - - - 0.941 0.912 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
61. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.741 0.939 - - - - 0.930 0.872 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
62. rab3ab ENSDARG00000043835 1267 2.739 0.898 - - - - 0.898 0.943 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
63. plp1a ENSDARG00000103732 3544 2.736 0.883 - - - - 0.907 0.946 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
64. mllt11 ENSDARG00000071026 2518 2.733 0.912 - - - - 0.898 0.923 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
65. syt9a ENSDARG00000003994 298 2.727 0.946 - - - - 0.974 0.807 - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
66. gabra5 ENSDARG00000070730 156 2.726 0.894 - - - - 0.881 0.951 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
67. atpv0e2 ENSDARG00000059057 585 2.721 0.892 - - - - 0.929 0.900 - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
68. tuba1c ENSDARG00000055216 8384 2.718 0.893 - - - - 0.876 0.949 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
69. syngr3a ENSDARG00000014871 405 2.717 0.910 0.847 - - - - 0.960 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
70. si:ch211-11c15.3 si:ch211-11c15.3 1279 2.716 0.855 - - - - 0.949 0.912 - -
71. si:dkey-245p14.4 ENSDARG00000070320 418 2.714 0.907 0.833 - - - 0.974 - - - si:dkey-245p14.4 [Source:ZFIN;Acc:ZDB-GENE-061207-63]
72. adarb1a ENSDARG00000041609 476 2.707 0.797 - - - - 0.959 0.951 - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
73. spock2 ENSDARG00000075393 791 2.705 0.794 - - - - 0.974 0.937 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
74. atl1 ENSDARG00000060481 251 2.7 0.831 - - - - 0.976 0.893 - - atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]
75. fez1 ENSDARG00000023174 701 2.7 0.928 - - - - 0.899 0.873 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
76. adcyap1b ENSDARG00000027740 1539 2.696 0.977 - - - - 0.892 0.827 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
77. gng3 ENSDARG00000009553 2530 2.686 0.924 0.827 - - - - 0.935 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
78. nmnat2 ENSDARG00000004580 370 2.681 0.959 - - - - 0.876 0.846 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
79. dpysl4 ENSDARG00000103490 534 2.679 0.855 - - - - 0.888 0.936 - - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
80. adam23a ENSDARG00000062323 580 2.674 0.923 - - - - 0.863 0.888 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
81. tuba2 ENSDARG00000045014 1490 2.674 0.840 - - - - 0.965 0.869 - - tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
82. adam11 ENSDARG00000079204 298 2.673 0.974 - - - - 0.799 0.900 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
83. olfm1b ENSDARG00000014053 1392 2.672 0.828 - - - - 0.907 0.937 - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
84. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.67 0.925 - - - - 0.844 0.901 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
85. necap1 ENSDARG00000020798 612 2.665 0.841 - - - - 0.903 0.921 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
86. C7H4orf48 C7H4orf48 1455 2.663 0.815 - - - - 0.965 0.883 - -
87. upf3a ENSDARG00000069297, ENSDARG00000111067 196 2.658 0.846 - - - - 0.927 0.885 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
88. pax3a ENSDARG00000010192 626 2.655 0.790 - - - - 0.976 0.889 - - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
89. BX957337.1 BX957337.1 1685 2.653 0.770 - - - - 0.958 0.925 - -
90. aatkb ENSDARG00000104442 392 2.651 - - - - 0.988 0.779 0.884 - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
91. snap25b ENSDARG00000058117 469 2.648 0.891 - - - - 0.810 0.947 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
92. pou4f1 ENSDARG00000005559 821 2.647 0.976 - - - - 0.761 0.910 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
93. hoxc4a ENSDARG00000070338 1382 2.647 - - - - 0.972 0.917 0.758 - - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
94. stmn2b ENSDARG00000070537 1586 2.639 0.872 - - - - 0.882 0.885 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
95. CLIP3 ENSDARG00000054456 734 2.637 0.811 - - - - 0.937 0.889 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
96. dla ENSDARG00000010791 9281 2.636 0.766 - - - 0.906 - 0.964 - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
97. prrt1 ENSDARG00000062208 368 2.634 0.962 - - - - 0.765 0.907 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
98. stxbp1a ENSDARG00000001994 5154 2.62 - 0.741 - - - 0.945 0.934 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
99. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.619 0.910 - - - - 0.873 0.836 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
100. zic5 ENSDARG00000016022 1034 2.609 0.881 - - - - 0.890 0.838 - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]

There are 3077 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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