Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hp1bp3

Gene Name Gene ID Reads Annotation
hp1bp3 ENSDARG00000044669 23708 heterochromatin protein 1, binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060810-79]










Genes with expression patterns similar to hp1bp3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hp1bp3 ENSDARG00000044669 23708 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 heterochromatin protein 1, binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060810-79]
2. mllt10 ENSDARG00000045401 7557 2.553 - - - 0.943 - 0.786 - - 0.824 MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
3. lmnb1 ENSDARG00000044299 9817 2.534 - - - 0.952 - 0.701 - - 0.881 lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
4. hnrnpa0a ENSDARG00000089302 45675 2.44 - - 0.807 - 0.751 - - 0.882 - heterogeneous nuclear ribonucleoprotein A0a [Source:ZFIN;Acc:ZDB-GENE-030131-2249]
5. IM:7163548 IM:7163548 6540 2.426 - - - - 0.729 0.803 - 0.894 -
6. MKI67 ENSDARG00000091150 11038 2.395 - - 0.772 - - 0.727 - 0.896 - marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
7. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 2.354 - - 0.707 - - 0.770 - 0.877 - heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
8. vdac1 ENSDARG00000045132 8051 2.348 - - 0.790 0.745 - 0.813 - - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
9. psmb3 ENSDARG00000013938 10744 2.339 - - 0.769 - - 0.772 - 0.798 - proteasome subunit beta 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2682]
10. RPS17L RPS17L 51105 2.318 0.749 - - 0.849 - 0.720 - - -
11. top2a ENSDARG00000024488 4273 2.316 - - - - 0.712 0.790 - 0.814 - DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
12. rbm4.3 ENSDARG00000022129 28571 2.273 - - 0.706 - 0.812 0.755 - - - RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
13. smad7 ENSDARG00000016858 1660 2.24 - - - - - 0.705 - 0.774 0.761 SMAD family member 7 [Source:ZFIN;Acc:ZDB-GENE-030128-3]
14. elavl1 11672 1.84 - - - 0.949 - 0.891 - - - ELAV like RNA binding protein 1, transcript variant X3
15. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 1.807 - - - 0.926 - - - - 0.881 zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
16. nucks1a ENSDARG00000078473 28285 1.804 - - - 0.886 - 0.918 - - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
17. creb1a ENSDARG00000053586 5068 1.792 - - - 0.931 - 0.861 - - - cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
18. cand1 ENSDARG00000017841 8164 1.76 - - - - - 0.903 - - 0.857 cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
19. wu:fb17g07 wu:fb17g07 10567 1.757 - - - 0.937 - 0.820 - - -
20. bri3bp ENSDARG00000010108 6295 1.749 - - - - - 0.866 - 0.883 - bri3 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-5254]
21. foxp4 ENSDARG00000076120 9458 1.745 - - - - - 0.842 - - 0.903 forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
22. rps29 ENSDARG00000041232 71334 1.742 0.754 - - - - - 0.988 - - ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
23. prmt1 ENSDARG00000010246 11311 1.74 - - - 0.910 - 0.830 - - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
24. ncoa4 ENSDARG00000021439 4581 1.736 - - - 0.917 - - - - 0.819 nuclear receptor coactivator 4 [Source:ZFIN;Acc:ZDB-GENE-040426-689]
25. hmgb3a ENSDARG00000056725 15668 1.72 - - - - - 0.823 - 0.897 - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
26. hes6 ENSDARG00000019335 4754 1.715 - - - - - 0.719 0.996 - - hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
27. pgam5 ENSDARG00000035608 4044 1.713 - - - - - 0.860 - 0.853 - PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
28. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 1.71 - - - - - 0.849 - 0.861 - heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
29. lypla2 ENSDARG00000053656 8971 1.709 - - - - - 0.850 - 0.859 - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
30. GATAD2B ENSDARG00000005834 3855 1.709 - - - - - 0.830 - 0.879 - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
31. mapre1b ENSDARG00000002659 9119 1.706 - - - 0.911 - 0.795 - - - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
32. nucks1b ENSDARG00000012777 4468 1.701 - - - 0.939 - - - 0.762 - nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
33. pinx1 ENSDARG00000023532 4452 1.695 - - - 0.929 - - - 0.766 - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
34. thoc7 ENSDARG00000015394 3824 1.684 - - - 0.934 - 0.750 - - - THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
35. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 1.684 - - - 0.943 - 0.741 - - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
36. ptmaa ENSDARG00000021113, ENSDARG00000110479 42345 1.681 - - - - - - 0.834 0.847 - prothymosin alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-7647]
37. seta ENSDARG00000031495 39977 1.677 - - - - 0.847 0.830 - - - SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
38. sumo3a ENSDARG00000028119 13447 1.667 - - - - - 0.863 - 0.804 - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
39. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 1.665 - - - 0.924 - 0.741 - - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
40. TNRC6C_2 TNRC6C_2 2444 1.663 - - - - - 0.812 - - 0.851
41. marcksl1b ENSDARG00000035715 37390 1.661 0.732 - - - - - - 0.929 - MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
42. prss35 ENSDARG00000100691, ENSDARG00000109353 2333 1.661 - - - 0.923 - 0.738 - - - protease, serine, 35 [Source:ZFIN;Acc:ZDB-GENE-040704-55]
43. zgc:158409 zgc:158409 21963 1.657 - - - - - 0.782 - - 0.875
44. impdh1b ENSDARG00000029524 7472 1.656 - - - - - - 0.908 0.748 - IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
45. setbp1 ENSDARG00000093799 4499 1.652 - - - - - 0.803 - 0.849 - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
46. gdi1 ENSDARG00000056122 4106 1.651 - - - 0.937 - 0.714 - - - GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
47. nusap1 ENSDARG00000002403 6953 1.646 - - - - - 0.809 - - 0.837 nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
48. eif3ba ENSDARG00000059654 22960 1.644 - 0.892 - - - 0.752 - - - eukaryotic translation initiation factor 3, subunit Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2748]
49. sncb ENSDARG00000104945 8197 1.642 - - - 0.938 - 0.704 - - - synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
50. notch3 ENSDARG00000052139 15033 1.641 - - - - - 0.816 - 0.825 - notch 3 [Source:ZFIN;Acc:ZDB-GENE-000329-5]
51. hnrnpab hnrnpab 72354 1.638 0.752 - - - - 0.886 - - -
52. cnn3b ENSDARG00000029856 4807 1.636 - - - - - 0.752 - - 0.884 calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
53. NAT16 ENSDARG00000086222 4682 1.635 - - - - - 0.785 - - 0.850 N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
54. psmc4 ENSDARG00000027099, ENSDARG00000109415 6643 1.627 0.733 - - - - 0.894 - - - proteasome 26S subunit, ATPase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5083]
55. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.627 - - - - 0.740 - - 0.887 - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
56. h2afva ENSDARG00000068820 16427 1.622 - - 0.821 - - 0.801 - - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
57. cd82a ENSDARG00000019098 6761 1.619 - - - - - 0.789 - - 0.830 CD82 molecule a [Source:ZFIN;Acc:ZDB-GENE-030131-2818]
58. dbn1 ENSDARG00000069113 4527 1.617 - - - - - 0.734 - - 0.883 drebrin 1 [Source:ZFIN;Acc:ZDB-GENE-091204-284]
59. CDCA4 ENSDARG00000042319 7918 1.608 - - - - - 0.743 - 0.865 - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
60. smc1al ENSDARG00000058203 8838 1.608 - - - - - 0.885 - 0.723 - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
61. h2afvb ENSDARG00000116491 35692 1.607 - - - - - 0.825 - - 0.782 H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
62. cbx5 ENSDARG00000061187 24026 1.607 - - - - 0.836 0.771 - - - chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
63. psmc6 ENSDARG00000037038, ENSDARG00000111223, ENSDARG00000114650 25449 1.603 0.788 - - - - - - - 0.815 proteasome 26S subunit, ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-304]
64. smarce1 ENSDARG00000016871 9628 1.601 - - 0.724 - - 0.877 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
65. ppm1g ENSDARG00000075559 6516 1.596 - - - - - 0.702 - 0.894 - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
66. kif22 ENSDARG00000102624 3694 1.589 - - - - - 0.769 - 0.820 - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
67. sipa1l2 ENSDARG00000061640 4545 1.584 - - - - - 0.727 - 0.857 - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
68. puf60b ENSDARG00000001241 13827 1.583 - - - - - 0.740 - 0.843 - poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
69. ralbp1 ENSDARG00000078653 2440 1.58 - - - - - 0.798 - 0.782 - ralA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2098]
70. znf319 znf319 3027 1.58 - - - - - 0.805 - 0.775 -
71. akirin2 ENSDARG00000058729 13245 1.575 - - 0.848 - - 0.727 - - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
72. pnrc2 ENSDARG00000053291, ENSDARG00000112537 50848 1.57 - 0.830 - - - - - 0.740 - proline-rich nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5475]
73. srsf1b ENSDARG00000017843 2760 1.568 - - - - - 0.740 - - 0.828 serine/arginine-rich splicing factor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1467]
74. hcfc1b ENSDARG00000012519 3633 1.568 - - - - - 0.713 - - 0.855 host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
75. h1f0 ENSDARG00000038559 39781 1.565 - - - 0.743 - 0.822 - - - H1 histone family, member 0 [Source:ZFIN;Acc:ZDB-GENE-030131-337]
76. srsf4 ENSDARG00000105293 9657 1.561 - - 0.782 - - 0.779 - - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
77. epb41a ENSDARG00000099283 860 1.558 - - - - - - - 0.744 0.814 erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
78. spcs2 ENSDARG00000042823 10032 1.557 - - - - - 0.773 - 0.784 - signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
79. AP3B2 1874 1.554 - - - - - 0.736 - 0.818 - adaptor related protein complex 3 beta 2 subunit, transcript variant X2
80. sarnp ENSDARG00000059357 4768 1.553 0.795 - - - - 0.758 - - - SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
81. cox6c ENSDARG00000038577 16845 1.552 - - - 0.835 - 0.717 - - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
82. rpl5a ENSDARG00000020197 35209 1.552 - 0.816 - - - - 0.736 - - ribosomal protein L5a [Source:ZFIN;Acc:ZDB-GENE-030131-5161]
83. snrpd3l ENSDARG00000076283 7655 1.546 0.775 - - - - 0.771 - - - small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
84. nadl1.1 1200 1.546 - - - - - 0.704 - 0.842 - neural adhesion molecule L1.1, transcript variant X1
85. rtf1 ENSDARG00000008947 6596 1.544 0.787 - - - - 0.757 - - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
86. klc2 3058 1.542 - - - - - 0.747 - 0.795 - kinesin light chain 2
87. ZNF337_25 ZNF337_25 1713 1.541 - - - - - 0.718 - - 0.823
88. napg napg 645 1.539 - - - - - 0.729 - 0.810 -
89. cadm3 ENSDARG00000057013 1545 1.537 - - - - - 0.705 - 0.832 - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
90. CYHR1 ENSDARG00000061057 2625 1.534 - - - - - 0.720 - - 0.814 cysteine/histidine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-060929-720]
91. gipc1 ENSDARG00000104483 2913 1.531 - - - - - 0.731 - 0.800 - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
92. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.53 - - - - 0.724 0.806 - - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
93. eef1b2 ENSDARG00000044521 26570 1.527 0.718 - - - 0.809 - - - - eukaryotic translation elongation factor 1 beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7310]
94. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 1.514 - - 0.704 - - 0.810 - - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
95. si:ch211-51e12.7 ENSDARG00000045914 9598 1.513 - - 0.759 - - 0.754 - - - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
96. TUBA1A ENSDARG00000001889 25294 1.513 - - - - - 0.762 - 0.751 - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
97. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 1.506 - - - - - 0.750 - 0.756 - nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
98. btg2 ENSDARG00000020298 6616 1.498 - - - - - 0.743 - 0.755 - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
99. tet2 ENSDARG00000076928 2190 1.487 - - - - - 0.714 - 0.773 - tet methylcytosine dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-090312-98]
100. tead1a ENSDARG00000028159 3574 1.487 - - - - - 0.718 - 0.769 - TEA domain family member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2101]

There are 1042 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA