Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for hoxd13a

Gene Name Gene ID Reads Annotation
hoxd13a ENSDARG00000059256 1190 homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]










Genes with expression patterns similar to hoxd13a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hoxd13a ENSDARG00000059256 1190 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
2. hoxc13a ENSDARG00000070353 4815 2.855 - - - - 0.959 0.949 0.947 - - homeobox C13a [Source:ZFIN;Acc:ZDB-GENE-000822-4]
3. SPAG17 SPAG17 31 2.621 0.923 0.745 - - - - 0.953 - -
4. sema6d ENSDARG00000002748 133 2.3 0.799 0.748 - - - - 0.753 - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:ZFIN;Acc:ZDB-GENE-040426-1933]
5. si:ch211-243g18.2 ENSDARG00000044261 4483 2.233 - 0.793 - 0.714 0.726 - - - - si:ch211-243g18.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2830]
6. sh3d19 ENSDARG00000088202, ENSDARG00000114126, ENSDARG00000117115 340 2.212 0.731 0.747 - - - - 0.734 - - SH3 domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-050522-481]
7. BX649554.3_1 BX649554.3_1 1071 2.198 0.741 - 0.704 - 0.753 - - - -
8. si:dkey-5n7.2 ENSDARG00000102339 42 1.839 - - - - - 0.898 0.941 - - si:dkey-5n7.2 [Source:ZFIN;Acc:ZDB-GENE-050420-254]
9. si:dkey-153n9.5 si:dkey-153n9.5 20 1.832 - - - - - 0.889 0.943 - -
10. meox1 ENSDARG00000007891, ENSDARG00000115382 1584 1.803 - - 0.915 - 0.888 - - - - mesenchyme homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-149]
11. insl5a ENSDARG00000070966, ENSDARG00000112563 45 1.785 - - - - - 0.889 0.896 - - insulin-like 5a [Source:ZFIN;Acc:ZDB-GENE-050310-4]
12. edem2 ENSDARG00000028448 236 1.763 - - - - - 0.861 0.902 - - ER degradation enhancer, mannosidase alpha-like 2 [Source:ZFIN;Acc:ZDB-GENE-060519-1]
13. lad1 ENSDARG00000022698 127 1.759 1.000 0.759 - - - - - - - ladinin [Source:ZFIN;Acc:ZDB-GENE-030616-268]
14. bik ENSDARG00000045549 18 1.756 - 0.813 - - - - 0.943 - - BCL2 interacting killer [Source:ZFIN;Acc:ZDB-GENE-041210-181]
15. si:dkey-4c15.14 ENSDARG00000094410 107 1.747 0.926 - - - - 0.821 - - - si:dkey-4c15.14 [Source:ZFIN;Acc:ZDB-GENE-050420-79]
16. AKAP13_1 ENSDARG00000079994 444 1.744 - 0.932 - - - - 0.812 - - A-kinase anchoring protein 13 [Source:HGNC Symbol;Acc:HGNC:371]
17. frem2a ENSDARG00000076856 11022 1.742 - - 0.884 - 0.858 - - - - Fras1 related extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-081119-3]
18. ZBTB41 ENSDARG00000054984 464 1.742 - 0.877 - - - 0.865 - - - zinc finger and BTB domain containing 41 [Source:ZFIN;Acc:ZDB-GENE-130530-649]
19. pibf1 ENSDARG00000013006, ENSDARG00000015506 151 1.739 - 0.861 - - - 0.878 - - - progesterone immunomodulatory binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-94]
20. BX511121.1 ENSDARG00000029997 1774 1.738 - - 0.860 - 0.878 - - - -
21. hoxa13b ENSDARG00000036254 404 1.735 - - - 0.811 0.924 - - - - homeobox A13b [Source:ZFIN;Acc:ZDB-GENE-980526-365]
22. pc pc 116 1.733 - - - - - 0.768 0.965 - -
23. poc1b ENSDARG00000021110, ENSDARG00000116944 254 1.733 - - - - - 0.788 0.945 - - POC1 centriolar protein B [Source:ZFIN;Acc:ZDB-GENE-031118-54]
24. si:dkey-3d18.4 si:dkey-3d18.4 43 1.73 - - - - - 0.777 0.953 - -
25. stat2 ENSDARG00000031647, ENSDARG00000116348 441 1.722 - 0.807 - - - 0.915 - - - signal transducer and activator of transcription 2 [Source:ZFIN;Acc:ZDB-GENE-080321-1]
26. etv4 ENSDARG00000018303, ENSDARG00000115855 3889 1.717 - 0.877 0.840 - - - - - - ets variant 4 [Source:ZFIN;Acc:ZDB-GENE-990415-71]
27. zp2.1 ENSDARG00000086352 41 1.716 0.799 - - - - - 0.917 - - zona pellucida glycoprotein 2, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-991129-5]
28. si:ch211-198j3.1 si:ch211-198j3.1 5487 1.716 - - 0.755 - - - - 0.961 -
29. AL844186.1 ENSDARG00000114351 41 1.708 - - - 0.765 - - 0.943 - -
30. esyt1a ENSDARG00000034714 129 1.705 - 0.779 - - - 0.926 - - - extended synaptotagmin-like protein 1a [Source:ZFIN;Acc:ZDB-GENE-090311-55]
31. hoxa13a ENSDARG00000100312 543 1.705 - 0.786 - - 0.919 - - - - homeobox A13a [Source:ZFIN;Acc:ZDB-GENE-990415-5]
32. sb:cb252 sb:cb252 2480 1.704 - 0.893 - - - - 0.811 - -
33. CREB3L4 1085 1.704 - 0.920 - - - 0.784 - - - cAMP responsive element binding protein 3-like 4
34. SUOX ENSDARG00000091574 122 1.7 - 0.875 - - - 0.825 - - - sulfite oxidase [Source:ZFIN;Acc:ZDB-GENE-070718-3]
35. tmprss13b ENSDARG00000077573 47 1.698 - 0.709 - - - 0.989 - - - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
36. ogfrl1 ENSDARG00000061223 64 1.695 - 0.783 - - - - 0.912 - - opioid growth factor receptor-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-32]
37. BX537137.1 ENSDARG00000092436 77 1.692 - 0.813 - - - 0.879 - - - gastrula zinc finger protein XlCGF7.1 [Source:NCBI gene;Acc:100148466]
38. mctp2b ENSDARG00000073970 238 1.685 0.878 0.807 - - - - - - - multiple C2 domains, transmembrane 2b [Source:ZFIN;Acc:ZDB-GENE-050506-136]
39. cpa6 ENSDARG00000012013 73 1.674 - - - - 0.837 0.837 - - - carboxypeptidase A6 [Source:ZFIN;Acc:ZDB-GENE-091204-331]
40. si:ch211-102c2.8 ENSDARG00000093823 168 1.672 0.926 - - 0.746 - - - - - si:ch211-102c2.8 [Source:ZFIN;Acc:ZDB-GENE-081104-98]
41. crabp1b ENSDARG00000035904 2753 1.662 - - 0.835 - 0.827 - - - - cellular retinoic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040624-3]
42. cryba2a ENSDARG00000030349 1342 1.658 0.715 - - - - - 0.943 - - crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
43. CU929089.1 CU929089.1 479 1.657 - 0.915 - - - - 0.742 - -
44. si:dkey-150k17.3 33 1.653 - 0.773 - - - 0.880 - - - si:dkey-150k17.3
45. and1 ENSDARG00000088514 37603 1.652 - - - 0.725 0.927 - - - - actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
46. si:ch211-270n8.4 87 1.651 0.926 0.725 - - - - - - - si:ch211-270n8.4
47. bmp4 ENSDARG00000019995 2038 1.648 - 0.873 0.775 - - - - - - bone morphogenetic protein 4 [Source:ZFIN;Acc:ZDB-GENE-980528-2059]
48. sytl2 sytl2 259 1.644 - 0.899 - - - - 0.745 - -
49. si:ch211-76l23.4 ENSDARG00000096242 202 1.644 - - - - - - 0.943 0.701 - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
50. CU856237.1 CU856237.1 153 1.643 - 0.865 - - - 0.778 - - -
51. rxrab ENSDARG00000035127 231 1.642 - - - - 0.860 0.782 - - - retinoid x receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-243]
52. grid2ipb ENSDARG00000095603, ENSDARG00000111282 90 1.642 0.713 - - - - - 0.929 - - glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein, b [Source:ZFIN;Acc:ZDB-GENE-040724-161]
53. prickle1b ENSDARG00000045694 7536 1.642 - - 0.761 - 0.881 - - - - prickle homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2152]
54. myl9a ENSDARG00000038123 1207 1.639 0.730 - - - 0.909 - - - - myosin, light chain 9a, regulatory [Source:ZFIN;Acc:ZDB-GENE-041010-120]
55. lysmd3 ENSDARG00000024693 754 1.637 - - 0.747 - - - 0.890 - - LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]
56. NFAT5 NFAT5 62 1.631 - 0.799 - - - - 0.832 - -
57. dnal1 ENSDARG00000034042 339 1.627 0.740 0.887 - - - - - - - dynein, axonemal, light chain 1 [Source:ZFIN;Acc:ZDB-GENE-040801-178]
58. CR388015.1 CR388015.1 311 1.623 - 0.883 - - - 0.740 - - -
59. vav3a ENSDARG00000086623 498 1.621 - - - - - 0.872 0.749 - - vav 3 guanine nucleotide exchange factor a [Source:ZFIN;Acc:ZDB-GENE-091204-266]
60. fn1 fn1 2538 1.62 - - 0.742 - 0.878 - - - -
61. lrrc34 ENSDARG00000062235 23 1.618 - - - - 0.784 0.834 - - - leucine rich repeat containing 34 [Source:ZFIN;Acc:ZDB-GENE-091118-73]
62. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 1.617 - - - - 0.728 0.889 - - - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
63. SLC46A3 ENSDARG00000077313 162 1.616 - 0.794 - - - 0.822 - - - solute carrier family 46, member 3 [Source:ZFIN;Acc:ZDB-GENE-100105-2]
64. rp1 ENSDARG00000077687 18 1.61 0.799 - - - - 0.811 - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
65. crabp2b ENSDARG00000030449 3091 1.61 - 0.756 - - 0.854 - - - - cellular retinoic acid binding protein 2, b [Source:ZFIN;Acc:ZDB-GENE-050208-52]
66. zgc:92061 zgc:92061 21304 1.602 - - - - 0.890 - - 0.712 -
67. KIF26A KIF26A 1077 1.599 - - 0.809 - 0.790 - - - -
68. kcnk1a ENSDARG00000045067 743 1.597 - 0.782 - - - 0.815 - - - potassium channel, subfamily K, member 1a [Source:ZFIN;Acc:ZDB-GENE-070620-26]
69. ttll9 ENSDARG00000062806 89 1.594 - - - 0.731 - - 0.863 - - tubulin tyrosine ligase-like family, member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1582]
70. ncf4 ENSDARG00000040812, ENSDARG00000110339 45 1.593 0.799 - - - - 0.794 - - - neutrophil cytosolic factor 4 [Source:ZFIN;Acc:ZDB-GENE-041124-1]
71. skap1 ENSDARG00000001498, ENSDARG00000114047 55 1.592 - 0.761 - - - - 0.831 - - src kinase associated phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-090721-1]
72. emx1 ENSDARG00000039569 787 1.592 0.773 0.819 - - - - - - - empty spiracles homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-031007-7]
73. ube2l3b ENSDARG00000027141 26 1.587 - 0.798 - - 0.789 - - - - ubiquitin-conjugating enzyme E2L 3b [Source:ZFIN;Acc:ZDB-GENE-030131-662]
74. wbp11 ENSDARG00000099151, ENSDARG00000101411 567 1.583 - - - - - 0.835 0.748 - - WW domain binding protein 11 [Source:ZFIN;Acc:ZDB-GENE-040426-1829]
75. lygl1 ENSDARG00000056874 309 1.562 - 0.806 - - - - 0.756 - - lysozyme g-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-461]
76. NEK3 ENSDARG00000058869 55 1.561 - 0.721 - - - 0.840 - - - NIMA related kinase 3 [Source:HGNC Symbol;Acc:HGNC:7746]
77. strumpellin 212 1.561 - 0.822 - - - 0.739 - - - strumpellin
78. BX005423.3 BX005423.3 33 1.561 0.750 - - - - 0.811 - - -
79. foxj1a ENSDARG00000101919 1095 1.56 - - 0.810 - 0.750 - - - - forkhead box J1a [Source:ZFIN;Acc:ZDB-GENE-060929-1178]
80. lrrc17 ENSDARG00000037960 1585 1.558 - - 0.789 - - - 0.769 - - leucine rich repeat containing 17 [Source:ZFIN;Acc:ZDB-GENE-030131-9774]
81. abca2 ENSDARG00000013500 91 1.556 0.798 - - - - - 0.758 - - ATP-binding cassette, sub-family A (ABC1), member 2 [Source:ZFIN;Acc:ZDB-GENE-050517-1]
82. sparc ENSDARG00000019353 38281 1.544 - - 0.778 - - - - 0.766 - secreted protein, acidic, cysteine-rich (osteonectin) [Source:ZFIN;Acc:ZDB-GENE-030131-9]
83. BX470211.1 ENSDARG00000105629 111 1.543 - 0.729 - - - - 0.814 - -
84. wnt5b ENSDARG00000102464 1662 1.537 - - 0.741 - 0.796 - - - - wingless-type MMTV integration site family, member 5b [Source:ZFIN;Acc:ZDB-GENE-980526-87]
85. and2 ENSDARG00000079302 20939 1.534 - - 0.787 - 0.747 - - - - actinodin2 [Source:ZFIN;Acc:ZDB-GENE-041105-2]
86. CRFA31.2 CRFA31.2 12 1.526 - 0.723 - - 0.803 - - - -
87. hoxc12a ENSDARG00000070352 7409 1.526 - - - 0.770 0.756 - - - - homeobox C12a [Source:ZFIN;Acc:ZDB-GENE-000822-6]
88. antxr1c ENSDARG00000063612 3203 1.526 - - 0.771 - 0.755 - - - - ANTXR cell adhesion molecule 1c [Source:ZFIN;Acc:ZDB-GENE-090514-5]
89. enkur ENSDARG00000031248 427 1.522 - - 0.789 0.733 - - - - - enkurin, TRPC channel interacting protein [Source:ZFIN;Acc:ZDB-GENE-070718-1]
90. ZNF784_1 ZNF784_1 155 1.52 0.788 0.732 - - - - - - -
91. cnot7 ENSDARG00000032116, ENSDARG00000115413 184 1.514 0.799 - - - - - 0.715 - - CCR4-NOT transcription complex, subunit 7 [Source:ZFIN;Acc:ZDB-GENE-061013-29]
92. fam151a ENSDARG00000058218 40 1.513 - 0.798 - - - 0.715 - - - family with sequence similarity 151, member A [Source:ZFIN;Acc:ZDB-GENE-070705-105]
93. cxcl12b ENSDARG00000055100, ENSDARG00000113088 4476 1.511 - - 0.755 0.756 - - - - - chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030721-1]
94. BX855614.1 ENSDARG00000094551 1294 1.509 - 0.801 - - - - 0.708 - - si:dkey-262g12.9 [Source:NCBI gene;Acc:555910]
95. si:ch211-241n15.2 si:ch211-241n15.2 435 1.508 - - - - - 0.800 0.708 - -
96. TMEM246 ENSDARG00000061553 168 1.508 - 0.800 - - - - 0.708 - - transmembrane protein 246 [Source:ZFIN;Acc:ZDB-GENE-061013-692]
97. im:6904045 ENSDARG00000115174 179 1.507 - 0.748 - - - 0.759 - - - im:6904045 [Source:ZFIN;Acc:ZDB-GENE-050506-75]
98. si:dkey-238o14.5 si:dkey-238o14.5 450 1.506 - - - - - 0.792 - 0.714 -
99. si:dkey-100n23.5 ENSDARG00000086911 427 1.505 0.707 0.798 - - - - - - - si:dkey-100n23.5 [Source:ZFIN;Acc:ZDB-GENE-070912-347]
100. vsig10 ENSDARG00000058605, ENSDARG00000111389 361 1.494 - - 0.704 - - - 0.790 - - V-set and immunoglobulin domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-7476]

There are 1599 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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