Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for hoxd12a

Gene Name Gene ID Reads Annotation
hoxd12a ENSDARG00000059263 795 homeobox D12a [Source:ZFIN;Acc:ZDB-GENE-990415-118]










Genes with expression patterns similar to hoxd12a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hoxd12a ENSDARG00000059263 795 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 homeobox D12a [Source:ZFIN;Acc:ZDB-GENE-990415-118]
2. dckl1b dckl1b 115 1.693 0.955 - - - - 0.738 - - -
3. CR381544.1 ENSDARG00000088187 821 1.646 0.789 - - - - - - 0.857 -
4. mcmbp ENSDARG00000055314 731 1.644 - - - - - - 0.800 0.844 - minichromosome maintenance complex binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9676]
5. C20H1orf112 C20H1orf112 316 1.628 - 0.747 - - - - - 0.881 -
6. hfe2 4113 1.598 - 0.823 - 0.775 - - - - - hemochromatosis type 2
7. trpv6 ENSDARG00000014496, ENSDARG00000110671 128 1.593 0.874 - - - - 0.719 - - - transient receptor potential cation channel, subfamily V, member 6 [Source:ZFIN;Acc:ZDB-GENE-040624-12]
8. pex16 ENSDARG00000058202 486 1.593 - - - - - - 0.741 0.852 - peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
9. camk2d1 ENSDARG00000043010 669 1.587 - - - - - 0.735 - 0.852 - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 1 [Source:ZFIN;Acc:ZDB-GENE-040801-121]
10. DLC1 ENSDARG00000079317 2149 1.578 0.851 - - - - 0.727 - - - DLC1 Rho GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-130206-12]
11. SEMA5B SEMA5B 1316 1.577 0.832 - - - - - - 0.745 -
12. casp7 ENSDARG00000091836 657 1.575 - - - - - 0.753 - 0.822 - caspase 7, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-506]
13. iscub ENSDARG00000026582, ENSDARG00000115112 147 1.571 - 0.758 - - - - 0.813 - - iron-sulfur cluster assembly enzyme b [Source:ZFIN;Acc:ZDB-GENE-050417-332]
14. prpf3 ENSDARG00000086425, ENSDARG00000116776 513 1.557 - 0.801 - - - - 0.756 - - PRP3 pre-mRNA processing factor 3 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040823-3]
15. slc6a6a ENSDARG00000012534 183 1.556 0.714 - - - - - - 0.842 - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
16. AL954696.1 ENSDARG00000078442 768 1.554 - 0.817 - - - - 0.737 - - NOP9 nucleolar protein [Source:NCBI gene;Acc:100332577]
17. git2a ENSDARG00000061915 884 1.549 - 0.721 - - - - - 0.828 - G protein-coupled receptor kinase interacting ArfGAP 2a [Source:ZFIN;Acc:ZDB-GENE-060526-267]
18. sars2 ENSDARG00000102736 206 1.546 - 0.733 - - - 0.813 - - - seryl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040426-1616]
19. ankrd33ba ENSDARG00000058357 214 1.515 0.739 - - - - - 0.776 - - ankyrin repeat domain 33ba [Source:ZFIN;Acc:ZDB-GENE-040724-39]
20. hoxc12b ENSDARG00000103133 1290 1.511 - - - - 0.737 - - - 0.774 homeobox C12b [Source:ZFIN;Acc:ZDB-GENE-000329-17]
21. mettl2a ENSDARG00000008105, ENSDARG00000113100 1036 1.489 - 0.765 - - - - - 0.724 - methyltransferase like 2A [Source:ZFIN;Acc:ZDB-GENE-050417-462]
22. AC024175.9 AC024175.9 56 1.489 0.716 - - - - - 0.773 - -
23. aldh1a2 ENSDARG00000053493, ENSDARG00000113122 1679 1.487 - 0.733 - - - 0.754 - - - aldehyde dehydrogenase 1 family, member A2 [Source:ZFIN;Acc:ZDB-GENE-011010-3]
24. ism2 ism2 153 1.481 - - - - - 0.705 0.776 - -
25. dyrk2 ENSDARG00000094646 2163 1.47 - 0.723 - - - - - 0.747 - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]
26. timm13 ENSDARG00000058297 4447 1.468 - 0.754 - - - - - 0.714 - translocase of inner mitochondrial membrane 13 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-167]
27. zgc:113019 ENSDARG00000099743 994 1.468 0.753 0.715 - - - - - - - zgc:113019 [Source:ZFIN;Acc:ZDB-GENE-050417-449]
28. rfk ENSDARG00000060522 546 1.464 - 0.714 - - - 0.750 - - - riboflavin kinase [Source:ZFIN;Acc:ZDB-GENE-081104-321]
29. CU104716.2 CU104716.2 10 1.459 0.721 - - - - - 0.738 - -
30. cyp11a1 ENSDARG00000002347, ENSDARG00000111941 209 1.454 0.716 - - - - - 0.738 - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
31. oprk1 ENSDARG00000006894 43 1.444 - - - - - 0.714 0.730 - - opioid receptor, kappa 1 [Source:ZFIN;Acc:ZDB-GENE-030729-1]
32. ZBTB7B ENSDARG00000021891 843 1.443 - - - - - 0.703 - 0.740 - zinc finger and BTB domain containing 7B [Source:ZFIN;Acc:ZDB-GENE-040426-1134]
33. si:dkeyp-69b9.3 ENSDARG00000088881 109 1.429 - 0.724 - - - - 0.705 - - si:dkeyp-69b9.3 [Source:ZFIN;Acc:ZDB-GENE-100922-275]
34. hoxa11b ENSDARG00000007009 3983 1.429 - - - - 0.705 - - - 0.724 homeobox A11b [Source:ZFIN;Acc:ZDB-GENE-990415-4]
35. timp2a ENSDARG00000061226, ENSDARG00000114336 1756 1.409 - - - 0.703 0.706 - - - - TIMP metallopeptidase inhibitor 2a [Source:ZFIN;Acc:ZDB-GENE-030612-1]
36. caspb ENSDARG00000052039 4329 0.957 0.957 - - - - - - - - caspase b [Source:ZFIN;Acc:ZDB-GENE-020812-1]
37. slc23a1 ENSDARG00000015033 40 0.953 0.953 - - - - - - - - solute carrier family 23 (ascorbic acid transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-080804-2]
38. olfm1a ENSDARG00000018270 107 0.931 - - - - - - 0.931 - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
39. si:dkeyp-1h4.9 si:dkeyp-1h4.9 189 0.93 0.930 - - - - - - - -
40. ctssb.2 ctssb.2 122 0.91 - - - - - 0.910 - - -
41. cx28.6 ENSDARG00000003925 146 0.909 0.909 - - - - - - - - connexin 28.6 [Source:ZFIN;Acc:ZDB-GENE-040406-4]
42. CABZ01087670.1 CABZ01087670.1 411 0.902 0.902 - - - - - - - -
43. C8H1orf222 C8H1orf222 36 0.901 - - - - - - 0.901 - -
44. CR396586.2 CR396586.2 103 0.898 0.898 - - - - - - - -
45. si:ch211-179l5.6 si:ch211-179l5.6 33 0.897 - - - - - 0.897 - - -
46. xirp1 ENSDARG00000030722 1486 0.895 - 0.895 - - - - - - - xin actin binding repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-050221-2]
47. WNK2_1 WNK2_1 1048 0.894 - - - - - 0.894 - - -
48. gys2 ENSDARG00000004904 212 0.893 0.893 - - - - - - - - glycogen synthase 2 [Source:ZFIN;Acc:ZDB-GENE-030826-31]
49. ALPK1 195 0.893 - - - - - - - 0.893 - alpha-kinase 1
50. grasp ENSDARG00000000588, ENSDARG00000113330 766 0.892 - 0.892 - - - - - - - GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein [Source:ZFIN;Acc:ZDB-GENE-060312-30]
51. pcyt1ab ENSDARG00000004492 386 0.89 0.890 - - - - - - - - phosphate cytidylyltransferase 1, choline, alpha b [Source:ZFIN;Acc:ZDB-GENE-050522-114]
52. terf1 ENSDARG00000058710 317 0.89 0.890 - - - - - - - - telomeric repeat binding factor (NIMA-interacting) 1 [Source:ZFIN;Acc:ZDB-GENE-090612-2]
53. wu:fj30f06 480 0.889 0.889 - - - - - - - - wu:fj30f06, transcript variant X1
54. BX511021.1 ENSDARG00000073936 647 0.888 - - - - - - - 0.888 - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
55. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 0.887 - - - - - - - 0.887 - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
56. si:ch73-73d17.3 si:ch73-73d17.3 925 0.884 - - - - - - - 0.884 -
57. nrg2a ENSDARG00000077818 854 0.881 - - - - - - - 0.881 - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
58. ripk2 ENSDARG00000104290 71 0.881 0.881 - - - - - - - - receptor-interacting serine-threonine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030902-3]
59. hoxc10a ENSDARG00000070348 2323 0.88 - - - - 0.880 - - - - homeobox C10a [Source:ZFIN;Acc:ZDB-GENE-990415-110]
60. PEG3_3 PEG3_3 165 0.88 - 0.880 - - - - - - -
61. gchfr ENSDARG00000098588 169 0.88 - - - - - - 0.880 - - GTP cyclohydrolase I feedback regulator [Source:ZFIN;Acc:ZDB-GENE-040426-1731]
62. rbl2 ENSDARG00000045636 658 0.88 - 0.880 - - - - - - - retinoblastoma-like 2 (p130) [Source:ZFIN;Acc:ZDB-GENE-061109-2]
63. CABZ01045230.1 CABZ01045230.1 158 0.878 - - - - - - - 0.878 -
64. cyb561d1 ENSDARG00000055295, ENSDARG00000114150 124 0.878 - - - - - - 0.878 - - cytochrome b561 family, member D1 [Source:ZFIN;Acc:ZDB-GENE-040912-157]
65. VPS37B ENSDARG00000039319, ENSDARG00000109293 150 0.877 0.877 - - - - - - - - vacuolar protein sorting 37 homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060526-254]
66. TBC1D10B ENSDARG00000078604, ENSDARG00000114712 453 0.877 0.877 - - - - - - - - TBC1 domain family, member 10b [Source:ZFIN;Acc:ZDB-GENE-030131-7754]
67. znf326 ENSDARG00000098348 133 0.876 - - - - - 0.876 - - - zinc finger protein 326 [Source:ZFIN;Acc:ZDB-GENE-070424-227]
68. reep3l reep3l 608 0.875 - - - - - - - 0.875 -
69. timm10 ENSDARG00000069116 4459 0.873 - - - - - - - 0.873 - translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
70. TAF2 ENSDARG00000102307 1401 0.873 0.873 - - - - - - - - TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
71. RBM12B ENSDARG00000079717 541 0.873 - - - - - - - 0.873 - RNA binding motif protein 12B [Source:ZFIN;Acc:ZDB-GENE-030131-6428]
72. PPP1R15B ENSDARG00000068128, ENSDARG00000114787 112 0.872 0.872 - - - - - - - - protein phosphatase 1, regulatory subunit 15B [Source:ZFIN;Acc:ZDB-GENE-030829-40]
73. cebpz ENSDARG00000045857 270 0.872 - - - - - - 0.872 - - CCAAT enhancer binding protein zeta [Source:ZFIN;Acc:ZDB-GENE-050417-261]
74. HHLA2_1 HHLA2_1 456 0.872 - - - - - - - 0.872 -
75. polr1b ENSDARG00000077469, ENSDARG00000115880 313 0.871 - - - - - - 0.871 - - RNA polymerase I subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1598]
76. CTSA ENSDARG00000098114 1154 0.866 - - - - - 0.866 - - - cathepsin A [Source:ZFIN;Acc:ZDB-GENE-030131-537]
77. trappc3 ENSDARG00000045364 1021 0.865 - - - - - - - 0.865 - trafficking protein particle complex 3 [Source:ZFIN;Acc:ZDB-GENE-040801-120]
78. prkag3b ENSDARG00000000369 1945 0.865 - - - - - - - 0.865 - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
79. VDAC3 ENSDARG00000003695 34 0.865 - - - - - - - 0.865 - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
80. smtnl ENSDARG00000055632, ENSDARG00000109489 788 0.865 - 0.865 - - - - - - - smoothelin, like [Source:ZFIN;Acc:ZDB-GENE-040212-1]
81. commd1 ENSDARG00000031203 340 0.864 - - - - - - - 0.864 - copper metabolism (Murr1) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060512-329]
82. KBTBD13_1 KBTBD13_1 116 0.864 - - - - - - - 0.864 -
83. HYKK HYKK 261 0.864 - - - - - - - 0.864 -
84. pcdh7b ENSDARG00000060610 400 0.862 - 0.862 - - - - - - - protocadherin 7b [Source:ZFIN;Acc:ZDB-GENE-081104-299]
85. si:dkey-157e10.7 si:dkey-157e10.7 105 0.862 - - - - - - - 0.862 -
86. ube2t ENSDARG00000063285 716 0.862 - - - - - - 0.862 - - ubiquitin-conjugating enzyme E2T (putative) [Source:ZFIN;Acc:ZDB-GENE-061013-547]
87. p2rx3b ENSDARG00000029718 105 0.862 - - - - - - - 0.862 - purinergic receptor P2X, ligand-gated ion channel, 3b [Source:ZFIN;Acc:ZDB-GENE-030319-3]
88. pars2 ENSDARG00000044404, ENSDARG00000109425 271 0.861 - - - - - - - 0.861 - prolyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-4219]
89. BX005410.2 BX005410.2 44 0.86 - - - - - - - 0.860 -
90. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 0.86 - - - - - - - 0.860 - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
91. LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 0.86 - - - - - - - 0.860 - leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]
92. zgc:174877 ENSDARG00000079278 143 0.859 - - - - - - - 0.859 - zgc:174877 [Source:ZFIN;Acc:ZDB-GENE-041008-66]
93. sp9 ENSDARG00000099374 2266 0.859 - - - - 0.859 - - - - sp9 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040426-2313]
94. GDPD4_1 GDPD4_1 190 0.858 - - - - - - - 0.858 -
95. tmie ENSDARG00000069423 305 0.858 - - - - - - - 0.858 - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
96. b3galtla b3galtla 111 0.858 - - - - - - - 0.858 -
97. pld3 ENSDARG00000068199 205 0.858 - - - - - - 0.858 - - phospholipase D family, member 3 [Source:ZFIN;Acc:ZDB-GENE-050419-212]
98. CECR5 632 0.858 - - - - - - 0.858 - - cat eye syndrome chromosome region, candidate 5
99. nek6 ENSDARG00000037963 316 0.857 - - - - - 0.857 - - - NIMA-related kinase 6 [Source:ZFIN;Acc:ZDB-GENE-040724-133]
100. pus7 ENSDARG00000031774 195 0.857 - - - - - - - 0.857 - pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]

There are 1159 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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