Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hoxd11a

Gene Name Gene ID Reads Annotation
hoxd11a ENSDARG00000059267 521 homeobox D11a [Source:ZFIN;Acc:ZDB-GENE-990415-117]










Genes with expression patterns similar to hoxd11a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hoxd11a ENSDARG00000059267 521 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 homeobox D11a [Source:ZFIN;Acc:ZDB-GENE-990415-117]
2. ppp2r5eb ENSDARG00000069118 1902 1.688 - 0.793 - - - - - - 0.895 protein phosphatase 2, regulatory subunit B', epsilon isoform b [Source:ZFIN;Acc:ZDB-GENE-030904-6]
3. alg9 ENSDARG00000012840 631 1.632 - - - - - 0.702 - - 0.930 ALG9, alpha-1,2-mannosyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-1270]
4. si:ch211-198c19.2 si:ch211-198c19.2 165 1.626 0.702 - - - - - - - 0.924
5. elk3 ENSDARG00000018688, ENSDARG00000110853 1108 1.623 - - - - - - 0.714 - 0.909 ELK3, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-2]
6. rab5if ENSDARG00000074790 8807 1.616 - 0.720 - - - - - - 0.896 RAB5 interacting factor [Source:ZFIN;Acc:ZDB-GENE-030131-5938]
7. GRAMD4 GRAMD4 1967 1.597 - 0.867 - - - - - - 0.730
8. pgam1a ENSDARG00000005423 3986 1.567 - - - - - 0.820 - - 0.747 phosphoglycerate mutase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1827]
9. slc35f6 ENSDARG00000016745, ENSDARG00000114790 3823 1.547 - - - - - 0.714 - - 0.833 solute carrier family 35, member F6 [Source:ZFIN;Acc:ZDB-GENE-040718-297]
10. vps26bl ENSDARG00000055433 645 1.526 - - - - - 0.722 0.804 - - vacuolar protein sorting 26 homolog B, like [Source:ZFIN;Acc:ZDB-GENE-040718-112]
11. sdf2l1 ENSDARG00000035631 615 1.485 - 0.778 - - - 0.707 - - - stromal cell-derived factor 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-040808-46]
12. tpx2 ENSDARG00000078654 8120 1.482 - - - - - 0.744 0.738 - - TPX2, microtubule-associated, homolog (Xenopus laevis) [Source:ZFIN;Acc:ZDB-GENE-030131-9652]
13. ddx42 ENSDARG00000037928 1659 1.457 0.724 - - - - - 0.733 - - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
14. dip2ba ENSDARG00000005350, ENSDARG00000111011, ENSDARG00000111214 1640 1.447 - 0.727 - - - - 0.720 - - disco-interacting protein 2 homolog Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2305]
15. wdfy2 ENSDARG00000040453 406 0.943 - - - - - - - - 0.943 WD repeat and FYVE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041111-211]
16. rap2b ENSDARG00000103032 2080 0.941 - - - - - - - - 0.941 RAP2B, member of RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-2818]
17. rab11al ENSDARG00000014340 2116 0.94 - - - - - - - - 0.940 RAB11a, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-031118-188]
18. CU929394.1 CU929394.1 405 0.94 - - - - - - - - 0.940
19. MRPS12_1 MRPS12_1 2714 0.937 - - - - - - - - 0.937
20. sin3aa ENSDARG00000079716 580 0.937 - - - - - - - - 0.937 SIN3 transcription regulator family member Aa [Source:ZFIN;Acc:ZDB-GENE-070620-3]
21. gcnt4a ENSDARG00000035198, ENSDARG00000110336 661 0.936 - - - - - - - - 0.936 glucosaminyl (N-acetyl) transferase 4, core 2, a [Source:ZFIN;Acc:ZDB-GENE-030131-3231]
22. kdrl ENSDARG00000105215 766 0.936 - - - - - - - - 0.936 kinase insert domain receptor like [Source:ZFIN;Acc:ZDB-GENE-000705-1]
23. zgc:174160 484 0.935 - - - - - - - - 0.935 zgc:174160, transcript variant X1
24. nucb1 ENSDARG00000054833 2009 0.934 - - - - - - - - 0.934 nucleobindin 1 [Source:ZFIN;Acc:ZDB-GENE-060825-222]
25. dpysl5b ENSDARG00000059311 600 0.932 - - - - - - - - 0.932 dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
26. sh3rf1 ENSDARG00000070470 1463 0.932 - - - - - - - - 0.932 SH3 domain containing ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6288]
27. s1pr5a ENSDARG00000040526 923 0.932 - - - - - - - - 0.932 sphingosine-1-phosphate receptor 5a [Source:ZFIN;Acc:ZDB-GENE-041114-188]
28. wnt10a ENSDARG00000017155 491 0.932 - - - - - - - - 0.932 wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
29. LIMD1 LIMD1 1306 0.931 - - - - - - - - 0.931
30. fam60a 825 0.931 - - - - - - - - 0.931 family with sequence similarity 60, member A
31. PPFIBP1_2 PPFIBP1_2 1274 0.931 - - - - - - - - 0.931
32. fas ENSDARG00000043586 194 0.929 - - - - - - - - 0.929 Fas cell surface death receptor [Source:ZFIN;Acc:ZDB-GENE-061019-2]
33. adamts6 ENSDARG00000041982 320 0.929 - - - - - - - - 0.929 ADAM metallopeptidase with thrombospondin type 1 motif, 6 [Source:ZFIN;Acc:ZDB-GENE-091113-9]
34. hcls1 ENSDARG00000012729 1547 0.928 - - - - - - - - 0.928 hematopoietic cell-specific Lyn substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7191]
35. rel ENSDARG00000055276 571 0.928 - - - - - - - - 0.928 v-rel avian reticuloendotheliosis viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040718-255]
36. AIFM2 ENSDARG00000077549 1419 0.928 - - - - - - - - 0.928 apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
37. rsph4a ENSDARG00000067606 132 0.927 - - - - - - - - 0.927 radial spoke head component 4A [Source:ZFIN;Acc:ZDB-GENE-030131-7437]
38. igsf5 igsf5 85 0.927 - - - - - - - - 0.927
39. zgc:195633_1 142 0.926 - - - - - - - - 0.926 zgc:195633
40. C16H8orf76 C16H8orf76 329 0.926 - - - - - - - - 0.926
41. C11H19orf25 C11H19orf25 491 0.926 - - - - - - - - 0.926
42. strbp ENSDARG00000021455 1279 0.926 - - - - - - - - 0.926 spermatid perinuclear RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030729-18]
43. wrap73 ENSDARG00000009557 515 0.926 - - - - - - - - 0.926 WD repeat containing, antisense to TP73 [Source:ZFIN;Acc:ZDB-GENE-030131-6313]
44. acadl ENSDARG00000088357, ENSDARG00000115321 1179 0.925 - - - - - - - - 0.925 acyl-CoA dehydrogenase long chain [Source:ZFIN;Acc:ZDB-GENE-040426-771]
45. BSCL2 ENSDARG00000037008 689 0.925 - - - - - - - - 0.925 Berardinelli-Seip congenital lipodystrophy 2 (seipin) [Source:ZFIN;Acc:ZDB-GENE-051113-140]
46. CDC42EP1_1 CDC42EP1_1 449 0.925 - - - - - - - - 0.925
47. zgc:153311 ENSDARG00000015964 85 0.925 - - - - - - - - 0.925 zgc:153311 [Source:ZFIN;Acc:ZDB-GENE-060825-194]
48. acot9.2 ENSDARG00000058390, ENSDARG00000113544 438 0.925 - - - - - - - - 0.925 acyl-CoA thioesterase 9, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-051113-136]
49. CTTNBP2NL CTTNBP2NL 260 0.925 - - - - - - - - 0.925
50. ptpmt1 ENSDARG00000013860 772 0.924 - - - - - - - - 0.924 protein tyrosine phosphatase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-070112-272]
51. mtfr1 ENSDARG00000045304 277 0.924 - - - - - - - - 0.924 mitochondrial fission regulator 1 [Source:ZFIN;Acc:ZDB-GENE-041212-86]
52. BCL2L12 BCL2L12 327 0.923 - - - - - - - - 0.923
53. sgut1 3470 0.923 - - - - - - - - 0.923 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone, transcript variant X1
54. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 0.923 - - - - - - - - 0.923 vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
55. EMILIN2 EMILIN2 429 0.923 - - - - - - - - 0.923
56. dlg1 ENSDARG00000009677 706 0.922 - - - - - - - - 0.922 discs, large homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010724-8]
57. sec14l1 ENSDARG00000098821, ENSDARG00000103991 1004 0.922 - - - - - - - - 0.922 SEC14-like lipid binding 1 [Source:ZFIN;Acc:ZDB-GENE-040426-801]
58. uchl3 ENSDARG00000030177, ENSDARG00000109434 2843 0.92 - - - - - - - - 0.920 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-050522-158]
59. BX571949.1 BX571949.1 293 0.92 - - - - - - - - 0.920
60. FAM126B 588 0.92 - - - - - - - - 0.920 family with sequence similarity 126 member B
61. mfap4 ENSDARG00000090783 480 0.92 - - - - - - - - 0.920 microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
62. xrn1 ENSDARG00000091652 2864 0.919 - - - - - - - - 0.919 5'-3' exoribonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1203]
63. bida ENSDARG00000069290, ENSDARG00000112031 825 0.919 - - - - - - - - 0.919 BH3 interacting domain death agonist [Source:ZFIN;Acc:ZDB-GENE-050419-35]
64. zgc:153952 739 0.919 - - - - - - - - 0.919 zgc:153952, transcript variant X1
65. NAIF1 ENSDARG00000062753 696 0.919 - - - - - - - - 0.919 nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
66. lxn ENSDARG00000043102 415 0.919 - - - - - - - - 0.919 latexin [Source:ZFIN;Acc:ZDB-GENE-041212-18]
67. junbb ENSDARG00000104773 2536 0.918 - - - - - - - - 0.918 JunB proto-oncogene, AP-1 transcription factor subunit b [Source:ZFIN;Acc:ZDB-GENE-040426-2666]
68. dnajb9a ENSDARG00000052072 578 0.918 - - - - - - - - 0.918 DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
69. gins1 ENSDARG00000007624 1421 0.918 - - - - - - - - 0.918 GINS complex subunit 1 (Psf1 homolog) [Source:ZFIN;Acc:ZDB-GENE-041010-184]
70. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 0.918 - - - - - - - - 0.918 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
71. col4a3 ENSDARG00000003395 499 0.918 - - - - - - - - 0.918 collagen, type IV, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070802-4]
72. olfml2a ENSDARG00000005648 1157 0.918 - - - - - - - - 0.918 olfactomedin-like 2A [Source:ZFIN;Acc:ZDB-GENE-081105-107]
73. TRABD2A ENSDARG00000089701 401 0.918 - - - - - - - - 0.918 TraB domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-030131-4053]
74. ing5b ENSDARG00000068175 2502 0.917 - - - - - - - - 0.917 inhibitor of growth family, member 5b [Source:ZFIN;Acc:ZDB-GENE-030616-462]
75. eci1 ENSDARG00000018002 2141 0.917 - - - - - - - - 0.917 enoyl-CoA delta isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6033]
76. nipal3 ENSDARG00000021147, ENSDARG00000109606 1058 0.917 - - - - - - - - 0.917 NIPA like domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040718-379]
77. CT030204.3 CT030204.3 486 0.917 - - - - - - - - 0.917
78. sel1l ENSDARG00000004581 2246 0.917 - - - - - - - - 0.917 SEL1L, ERAD E3 ligase adaptor subunit [Source:ZFIN;Acc:ZDB-GENE-041001-122]
79. ube2t ENSDARG00000063285 716 0.916 - - - - - - - - 0.916 ubiquitin-conjugating enzyme E2T (putative) [Source:ZFIN;Acc:ZDB-GENE-061013-547]
80. zgc:114045 ENSDARG00000069334, ENSDARG00000112063 991 0.916 - - - - - - - - 0.916 zgc:114045 [Source:ZFIN;Acc:ZDB-GENE-050913-119]
81. pdzk1 ENSDARG00000022261 398 0.916 - - - - - - - - 0.916 PDZ domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-031222-1]
82. slc25a32b ENSDARG00000026835 502 0.916 - - - - - - - - 0.916 solute carrier family 25 (mitochondrial folate carrier), member 32b [Source:ZFIN;Acc:ZDB-GENE-050306-39]
83. plekhh1 ENSDARG00000053835 2123 0.915 - - - - - - - - 0.915 pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
84. tead3a ENSDARG00000074321 2240 0.915 - - - - - - - - 0.915 TEA domain family member 3 a [Source:ZFIN;Acc:ZDB-GENE-031112-10]
85. aacs ENSDARG00000012468 1138 0.915 - - - - - - - - 0.915 acetoacetyl-CoA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-903]
86. CABZ01055500.1 CABZ01055500.1 748 0.915 - - - - - - - - 0.915
87. RIBC2 ENSDARG00000075177 445 0.915 - - - - - - - - 0.915 RIB43A domain with coiled-coils 2 [Source:ZFIN;Acc:ZDB-GENE-050411-27]
88. ddx6 ENSDARG00000061338 2514 0.915 - - - - - - - - 0.915 DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83]
89. capsla ENSDARG00000103521 277 0.913 - - - - - - - - 0.913 calcyphosine-like a [Source:ZFIN;Acc:ZDB-GENE-030131-7291]
90. lhfpl2b_1 ENSDARG00000098153 1596 0.912 - - - - - - - - 0.912 LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
91. ecsit ENSDARG00000062834 896 0.912 - - - - - - - - 0.912 ECSIT signalling integrator [Source:ZFIN;Acc:ZDB-GENE-030131-1332]
92. MCUR1 MCUR1 786 0.912 - - - - - - - - 0.912
93. NACC2 160 0.912 - - - - - - - - 0.912 NACC family member 2
94. cetn4 ENSDARG00000041215 898 0.911 - - - - - - - - 0.911 centrin 4 [Source:ZFIN;Acc:ZDB-GENE-030826-21]
95. ypel3 ENSDARG00000055510 1344 0.911 - - - - - - - - 0.911 yippee-like 3 [Source:ZFIN;Acc:ZDB-GENE-030516-4]
96. ttc3 ENSDARG00000086075 2157 0.911 - - - - - - - - 0.911 tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
97. alg5 ENSDARG00000021938, ENSDARG00000061235 2279 0.91 - - - - - - - - 0.910 asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-6586]
98. rfx2 ENSDARG00000013575 1275 0.909 - - - - - - - - 0.909 regulatory factor X, 2 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-050227-4]
99. BX511121.1 ENSDARG00000029997 1774 0.909 - - - - - - - - 0.909
100. traf2b ENSDARG00000101036 429 0.909 - - - - - - - - 0.909 Tnf receptor-associated factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5345]

There are 830 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA