Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for hoxc9a

Gene Name Gene ID Reads Annotation
hoxc9a ENSDARG00000092809 18 homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]










Genes with expression patterns similar to hoxc9a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hoxc9a ENSDARG00000092809 18 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
2. arl11l arl11l 31 2.717 1.000 1.000 0.717 - - - - - -
3. SNORA81_1 SNORA81_1 8 2 1.000 1.000 - - - - - - -
4. ifit2 ifit2 11 2 1.000 1.000 - - - - - - -
5. RIMS1 RIMS1 9 2 - 1.000 - - - 1.000 - - -
6. si:ch211-285c6.2 ENSDARG00000079234 1 2 - - - - - 1.000 - 1.000 - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
7. fam163b ENSDARG00000073914 46 2 1.000 1.000 - - - - - - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
8. ddx26b 79 2 1.000 1.000 - - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
9. rbfox3l rbfox3l 34 2 - 1.000 - - - 1.000 - - -
10. GMEB2 ENSDARG00000093240 6 2 1.000 1.000 - - - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
11. loxhd1b ENSDARG00000074638 6 2 1.000 - - - - 1.000 - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
12. tbx5b ENSDARG00000092060 37 2 1.000 1.000 - - - - - - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
13. ubxn10 ENSDARG00000052535 24 2 1.000 - - - - - - 1.000 - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
14. zgc:113274 ENSDARG00000059235, ENSDARG00000116981 19 2 1.000 1.000 - - - - - - - zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]
15. DKK3 DKK3 12 2 - 1.000 - - - 1.000 - - -
16. si:dkey-97l20.5 si:dkey-97l20.5 33 2 - 1.000 - - - 1.000 - - -
17. gltpb ENSDARG00000077962 5 2 - 1.000 - - - 1.000 - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
18. mfsd4a mfsd4a 179 2 - 1.000 - - - 1.000 - - -
19. col28a1 col28a1 5 2 1.000 1.000 - - - - - - -
20. TMEM74 26 1.956 - 1.000 - - - 0.956 - - - transmembrane protein 74, transcript variant X3
21. MAP3K13 ENSDARG00000009493 8 1.95 1.000 - - - - 0.950 - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
22. csrnp1b ENSDARG00000038429 10 1.921 1.000 - - - - - - 0.921 - cysteine-serine-rich nuclear protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1515]
23. akt3a_1 ENSDARG00000104810 12 1.902 - - - - 0.902 1.000 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
24. tecrl2 tecrl2 11 1.883 - 1.000 - - - 0.883 - - -
25. C18H15orf59 C18H15orf59 80 1.872 - 1.000 - - - 0.872 - - -
26. CABZ01041769.1 CABZ01041769.1 17 1.857 - 1.000 - - 0.857 - - - -
27. myo5ab ENSDARG00000025218 14 1.857 1.000 - - - 0.857 - - - - myosin VAb [Source:ZFIN;Acc:ZDB-GENE-050411-72]
28. lingo1b ENSDARG00000035899 86 1.851 - 1.000 - - - 0.851 - - - leucine rich repeat and Ig domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040912-136]
29. st8sia1_1 ENSDARG00000098221 16 1.849 - 1.000 - - - 0.849 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
30. si:dkey-19f21.8 si:dkey-19f21.8 12 1.847 - 1.000 - - - - - - 0.847
31. tekt1 ENSDARG00000101331 27 1.845 - 1.000 - 0.845 - - - - - tektin 1 [Source:ZFIN;Acc:ZDB-GENE-041114-99]
32. ela3l ENSDARG00000007276 11 1.828 - - - 0.828 - 1.000 - - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
33. aqp3b ENSDARG00000069518 80 1.814 1.000 - - - 0.814 - - - - aquaporin 3b [Source:ZFIN;Acc:ZDB-GENE-040724-66]
34. CABZ01080492.1 CABZ01080492.1 495 1.81 1.000 - - - - - - 0.810 -
35. abcd1 ENSDARG00000074876 6 1.81 - - - - - 1.000 - 0.810 - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
36. nr5a1b ENSDARG00000023362 54 1.78 0.780 - - - - 1.000 - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
37. arl8 ENSDARG00000094709 6 1.766 1.000 - - - - - - 0.766 - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
38. GPC6_1 GPC6_1 34 1.76 - 1.000 - - - 0.760 - - -
39. EHD4 ENSDARG00000054302 46 1.752 1.000 - - 0.752 - - - - - EH-domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060810-22]
40. CABZ01073954.1 CABZ01073954.1 258 1.748 0.899 - - - - 0.849 - - -
41. CU928217.1 CU928217.1 12 1.743 - 1.000 - 0.743 - - - - -
42. gria4b ENSDARG00000059368, ENSDARG00000114212, ENSDARG00000115594 255 1.743 - 1.000 - - - 0.743 - - - glutamate receptor, ionotropic, AMPA 4b [Source:ZFIN;Acc:ZDB-GENE-030131-8013]
43. KLHL38 KLHL38 15 1.742 1.000 - - 0.742 - - - - -
44. SLC39A8 ENSDARG00000056757 52 1.74 1.000 - - - - - - 0.740 - solute carrier family 39 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-050419-124]
45. cpeb1a ENSDARG00000045932 81 1.737 0.915 0.822 - - - - - - - cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
46. si:ch211-215m21.17 si:ch211-215m21.17 14 1.737 - 1.000 - 0.737 - - - - -
47. nt5e ENSDARG00000071017 18 1.717 0.859 - - - - 0.858 - - - 5'-nucleotidase, ecto (CD73) [Source:ZFIN;Acc:ZDB-GENE-040426-1261]
48. FRMPD1 34 1.704 - 1.000 - - - 0.704 - - - FERM and PDZ domain containing 1, transcript variant X3
49. scg5 ENSDARG00000032126, ENSDARG00000077045 29 1.702 - 1.000 - - - 0.702 - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
50. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 1.702 1.000 - - - - 0.702 - - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
51. C10H5orf63 C10H5orf63 17 1.702 - 1.000 - - - 0.702 - - -
52. opn4xb ENSDARG00000103259 18 1.647 - 0.881 - - - - - 0.766 - opsin 4xb [Source:ZFIN;Acc:ZDB-GENE-070705-526]
53. nek1 ENSDARG00000022350 158 1.64 - 0.802 - - - 0.838 - - - NIMA-related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040730-1]
54. AP5Z1 ENSDARG00000078111 91 1.616 - 0.757 - - 0.859 - - - - adaptor related protein complex 5 subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-120508-2]
55. si:ch211-14c7.2 ENSDARG00000094522 369 1.613 - 0.893 - - - 0.720 - - - si:ch211-14c7.2 [Source:ZFIN;Acc:ZDB-GENE-060503-856]
56. si:dkey-253d23.4 ENSDARG00000079762 1560 1.593 - - 0.744 - - 0.849 - - - si:dkey-253d23.4 [Source:ZFIN;Acc:ZDB-GENE-050208-730]
57. secisbp2 ENSDARG00000073892 79 1.587 - 0.704 - - - 0.883 - - - SECIS binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-263]
58. lbx1b ENSDARG00000018611 399 1.555 - 0.789 - - - 0.766 - - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
59. dlgap3 ENSDARG00000055459 85 1.546 0.746 - - - - 0.800 - - - discs, large (Drosophila) homolog-associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-060503-413]
60. EFCAB6 ENSDARG00000020735 34 1.541 - 0.816 - - - 0.725 - - - EF-hand calcium binding domain 6 [Source:ZFIN;Acc:ZDB-GENE-070828-2]
61. shdb ENSDARG00000062109, ENSDARG00000111006 323 1.541 - 0.767 - - - 0.774 - - - Src homology 2 domain containing transforming protein D, b [Source:ZFIN;Acc:ZDB-GENE-030131-6059]
62. syt4 ENSDARG00000036505 421 1.532 - 0.815 - - 0.717 - - - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
63. zgc:174877 ENSDARG00000079278 143 1.446 0.746 - - - - 0.700 - - - zgc:174877 [Source:ZFIN;Acc:ZDB-GENE-041008-66]
64. spata20 ENSDARG00000013880 46 1 - 1.000 - - - - - - - spermatogenesis associated 20 [Source:ZFIN;Acc:ZDB-GENE-030131-7269]
65. vsig8a ENSDARG00000054050, ENSDARG00000114869 69 1 1.000 - - - - - - - - V-set and immunoglobulin domain containing 8a [Source:ZFIN;Acc:ZDB-GENE-050417-338]
66. GLB1L2 ENSDARG00000034941 74 1 1.000 - - - - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
67. lingo1a ENSDARG00000034165 179 1 - 1.000 - - - - - - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
68. si:ch211-122i22.6 si:ch211-122i22.6 1 1 1.000 - - - - - - - -
69. adrb1_1 ENSDARG00000007490, ENSDARG00000115574 9 1 - 1.000 - - - - - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
70. dcun1d5 ENSDARG00000100363 3 1 1.000 - - - - - - - - DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2603]
71. zgc:113426 ENSDARG00000051793 37 1 - 1.000 - - - - - - - zgc:113426 [Source:ZFIN;Acc:ZDB-GENE-050913-149]
72. FP236168.1 FP236168.1 150 1 1.000 - - - - - - - -
73. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 1 1.000 - - - - - - - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
74. rab11bb_1 ENSDARG00000090086 7 1 - - - - - 1.000 - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
75. htr2cl1 ENSDARG00000018228, ENSDARG00000113913 131 1 - 1.000 - - - - - - - 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1 [Source:ZFIN;Acc:ZDB-GENE-081104-48]
76. tap1 ENSDARG00000079766 75 1 - 1.000 - - - - - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:ZFIN;Acc:ZDB-GENE-050517-43]
77. si:ch211-285d14.3 si:ch211-285d14.3 1 1 - - - - - 1.000 - - -
78. si:rp71-84d19.2 si:rp71-84d19.2 34 1 - - - - - 1.000 - - -
79. foxq1a ENSDARG00000030896 121 1 - 1.000 - - - - - - - forkhead box Q1a [Source:ZFIN;Acc:ZDB-GENE-070424-74]
80. si:ch211-113a14.19_4 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 18 1 - 1.000 - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
81. si:ch211-202h22.10 ENSDARG00000087290 13 1 - - - - - 1.000 - - - si:ch211-202h22.10 [Source:ZFIN;Acc:ZDB-GENE-110914-121]
82. si:dkey-32n7.7 ENSDARG00000063444 4 1 - 1.000 - - - - - - - si:dkey-32n7.7 [Source:ZFIN;Acc:ZDB-GENE-121214-179]
83. si:ch211-141e20.2 ENSDARG00000093349 61 1 - 1.000 - - - - - - - si:ch211-141e20.2 [Source:ZFIN;Acc:ZDB-GENE-070912-75]
84. si:dkey-33i11.1 ENSDARG00000053027 2 1 - - - 1.000 - - - - - si:dkey-33i11.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4630]
85. mthfd2l ENSDARG00000054199 25 1 - 1.000 - - - - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-5707]
86. CABZ01044611.1 CABZ01044611.1 8 1 - - - - - 1.000 - - -
87. ZBTB40 ENSDARG00000091762 57 1 1.000 - - - - - - - - zinc finger and BTB domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-1704]
88. zgc:136902 zgc:136902 4 1 - - - 1.000 - - - - -
89. EXT1 EXT1 3 1 - - - - - 1.000 - - -
90. TMEM260 ENSDARG00000076362 63 1 1.000 - - - - - - - - transmembrane protein 260 [Source:ZFIN;Acc:ZDB-GENE-030131-4198]
91. ETS1 ENSDARG00000024431 6 1 1.000 - - - - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
92. CABZ01084323.1 ENSDARG00000104937 5 1 - - - 1.000 - - - - - protein tyrosine phosphatase, receptor type D [Source:NCBI gene;Acc:100330629]
93. si:ch211-265m20.8 120 1 - 1.000 - - - - - - - si:ch211-265m20.8, transcript variant X1
94. AL935186.3 ENSDARG00000109223 19 1 - 1.000 - - - - - - -
95. MFAP4_5 MFAP4_5 4 1 - - - - - - - 1.000 -
96. rgs9bp ENSDARG00000009466 41 1 - - - - - 1.000 - - - regulator of G protein signaling 9 binding protein [Source:ZFIN;Acc:ZDB-GENE-030728-1]
97. trim46b ENSDARG00000058649 54 1 - 1.000 - - - - - - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
98. impdh1a ENSDARG00000042336, ENSDARG00000115253, ENSDARG00000116322 67 1 1.000 - - - - - - - - IMP (inosine 5'-monophosphate) dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-15]
99. CR391967.1 CR391967.1 135 1 - 1.000 - - - - - - -
100. BX469915.2 BX469915.2 48 1 - 1.000 - - - - - - -

There are 1116 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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