Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hoxc8a

Gene Name Gene ID Reads Annotation
hoxc8a ENSDARG00000070346 4252 homeobox C8a [Source:ZFIN;Acc:ZDB-GENE-990415-114]










Genes with expression patterns similar to hoxc8a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hoxc8a ENSDARG00000070346 4252 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 homeobox C8a [Source:ZFIN;Acc:ZDB-GENE-990415-114]
2. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 2.677 - 0.936 - - - 0.882 0.859 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
3. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.562 0.961 - - - - 0.851 0.750 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
4. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 2.504 - - - - - 0.842 0.768 0.894 - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
5. clstn1 ENSDARG00000031720 5286 2.475 - 0.906 - - - 0.800 0.769 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
6. elavl3 ENSDARG00000014420 8644 2.47 0.957 - - - - 0.777 0.736 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
7. jarid2b ENSDARG00000062268 2206 2.458 - 0.923 - - - 0.779 0.756 - - jumonji, AT rich interactive domain 2b [Source:ZFIN;Acc:ZDB-GENE-060503-246]
8. st8sia2 ENSDARG00000018788 2183 2.446 - 0.931 - - - 0.787 0.728 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
9. stxbp1a ENSDARG00000001994 5154 2.439 0.893 - - - - 0.825 0.721 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
10. fmnl2b ENSDARG00000075041 1744 2.416 - 0.913 - - - 0.799 0.704 - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
11. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 2.413 - - - - - 0.830 0.715 0.868 - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
12. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.407 - 0.923 - - - 0.745 0.739 - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
13. nusap1 ENSDARG00000002403 6953 2.4 - 0.927 - - - 0.755 0.718 - - nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
14. znf292a ENSDARG00000016763 2253 2.37 - 0.950 - - - 0.704 0.716 - - zinc finger protein 292a [Source:ZFIN;Acc:ZDB-GENE-071004-18]
15. eno2 ENSDARG00000014287 2162 2.363 - - - - - 0.744 0.738 0.881 - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
16. CDIP1 ENSDARG00000076118 1294 2.349 - - - - - 0.760 0.818 0.771 - cell death-inducing p53 target 1 [Source:ZFIN;Acc:ZDB-GENE-070720-18]
17. polb ENSDARG00000003749 2049 2.251 - - - - - 0.708 0.745 0.798 - polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
18. wu:fb17g07 wu:fb17g07 10567 2.217 - - - - - 0.764 0.744 0.709 -
19. pik3r3b ENSDARG00000034409, ENSDARG00000113215, ENSDARG00000117028 3213 2.187 - - - - - 0.715 0.710 0.762 - phosphoinositide-3-kinase, regulatory subunit 3b (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-743]
20. tarbp2 ENSDARG00000070471 1946 1.884 0.940 0.944 - - - - - - - TAR (HIV) RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8085]
21. atp5ia 4773 1.882 0.967 0.915 - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Ea
22. nova1 ENSDARG00000020178 4129 1.847 0.964 - - - - 0.883 - - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
23. dkc1 ENSDARG00000016484 7088 1.828 0.934 0.894 - - - - - - - dyskeratosis congenita 1, dyskerin [Source:ZFIN;Acc:ZDB-GENE-031118-120]
24. MGST1 MGST1 1958 1.806 0.895 0.911 - - - - - - -
25. nf2b ENSDARG00000025567 1441 1.803 - 0.923 - - - - - 0.880 - neurofibromin 2b (merlin) [Source:ZFIN;Acc:ZDB-GENE-040622-3]
26. TMEM150A_2 TMEM150A_2 739 1.788 0.931 - - - - - - 0.857 -
27. selt1a 9746 1.783 0.890 0.893 - - - - - - - selenoprotein T, 1a
28. itm2ca ENSDARG00000043448 1265 1.777 0.954 - - - - 0.823 - - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
29. ppp3r1b ENSDARG00000069360 2814 1.763 0.904 - - - - - 0.859 - - protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b [Source:ZFIN;Acc:ZDB-GENE-040912-18]
30. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 1.762 0.947 - - - - - 0.815 - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
31. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.759 - - - - - 0.882 0.877 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
32. calm1a ENSDARG00000021811 4791 1.759 - - - - - 0.880 0.879 - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
33. ppp2r2a ppp2r2a 5785 1.749 0.958 - - - - - 0.791 - -
34. nrarpa ENSDARG00000091419, ENSDARG00000111485 7867 1.745 - 0.938 - - - 0.807 - - - NOTCH regulated ankyrin repeat protein a [Source:ZFIN;Acc:ZDB-GENE-030515-6]
35. ptges3a ENSDARG00000037284, ENSDARG00000113517 3999 1.745 0.963 - - - - - - 0.782 - prostaglandin E synthase 3a (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040426-2200]
36. mrpl19 ENSDARG00000011885 2208 1.743 - 0.931 - - - - - 0.812 - mitochondrial ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040801-55]
37. ptprsa ENSDARG00000059738, ENSDARG00000110940 7232 1.738 0.939 - - - - 0.799 - - - protein tyrosine phosphatase, receptor type, s, a [Source:ZFIN;Acc:ZDB-GENE-020107-3]
38. taf3 ENSDARG00000045513 1819 1.734 - 0.943 - - - - 0.791 - - TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto [Source:ZFIN;Acc:ZDB-GENE-030131-6406]
39. nfya ENSDARG00000042004, ENSDARG00000114231 6606 1.72 0.930 - - - - 0.790 - - - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
40. fbxo45 ENSDARG00000071492, ENSDARG00000111553 732 1.72 0.946 - - - - 0.774 - - - F-box protein 45 [Source:ZFIN;Acc:ZDB-GENE-040426-1450]
41. AL935029.1 AL935029.1 514 1.719 0.940 - - - - 0.779 - - -
42. isoc1 ENSDARG00000060069 1621 1.719 - 0.940 - - - 0.779 - - - isochorismatase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061020-1]
43. hnrnph1l ENSDARG00000005551 8727 1.716 0.961 - - - - 0.755 - - - heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
44. uchl3 ENSDARG00000030177, ENSDARG00000109434 2843 1.713 - 0.931 - - - - 0.782 - - ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-050522-158]
45. her2 ENSDARG00000038205 3219 1.697 - 0.929 - - - - 0.768 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
46. snap25a ENSDARG00000020609 4537 1.696 - - - - - 0.869 - 0.827 - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
47. cltcb ENSDARG00000090716 5544 1.696 0.953 - - - - - 0.743 - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
48. si:dkey-117n7.3 ENSDARG00000092944 2518 1.694 - 0.860 - - - - - 0.834 - si:dkey-117n7.3 [Source:ZFIN;Acc:ZDB-GENE-060503-143]
49. btbd10b ENSDARG00000020252 7251 1.693 - 0.893 - - - - - 0.800 - BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
50. hdac8 ENSDARG00000003021, ENSDARG00000105159 1729 1.692 - 0.923 - - - - 0.769 - - histone deacetylase 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2772]
51. BAZ2B BAZ2B 3285 1.691 - 0.930 - - - 0.761 - - -
52. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 1.691 - - - - - 0.854 0.837 - - zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]
53. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.688 0.948 - - - - 0.740 - - - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
54. snx1a ENSDARG00000071031 3975 1.683 0.932 - - - - - - 0.751 - sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
55. mcts1 ENSDARG00000025972 4662 1.682 - 0.971 - - - - 0.711 - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
56. slc1a3a ENSDARG00000104431 9888 1.68 - - - - - 0.879 0.801 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
57. BX511086.1 BX511086.1 8308 1.677 - - - - - 0.794 0.883 - -
58. f10 ENSDARG00000088581 4968 1.675 0.811 0.864 - - - - - - - coagulation factor X [Source:ZFIN;Acc:ZDB-GENE-021206-9]
59. CBFA2T3 ENSDARG00000079012 6799 1.67 - - - - - 0.821 0.849 - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
60. epha4b ENSDARG00000011600 3110 1.67 - - - - - 0.882 0.788 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
61. naa15a ENSDARG00000003213 5889 1.669 - 0.905 - - - - 0.764 - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
62. tmpob ENSDARG00000022978 8121 1.669 - - - - - 0.868 0.801 - - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
63. hoxa9a ENSDARG00000105013 1509 1.668 - - - - - 0.838 0.830 - - homeobox A9a [Source:ZFIN;Acc:ZDB-GENE-000823-1]
64. schip1 ENSDARG00000035175 3838 1.663 - 0.938 - - - 0.725 - - - schwannomin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-466]
65. hnrnpub ENSDARG00000004735 16496 1.662 - - - - - 0.854 0.808 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
66. relnl relnl 863 1.662 - - - - - 0.881 0.781 - -
67. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.659 0.949 - - - - - 0.710 - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
68. hspa4a ENSDARG00000004754 3439 1.659 - 0.947 - - - - 0.712 - - heat shock protein 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2832]
69. znf503 ENSDARG00000018492 5974 1.658 - 0.900 - - - - 0.758 - - zinc finger protein 503 [Source:ZFIN;Acc:ZDB-GENE-031113-5]
70. ube2a ENSDARG00000098466 12765 1.657 - 0.849 - - - - 0.808 - - ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
71. puf60a ENSDARG00000032175 5618 1.654 - - - - - - 0.798 0.856 - poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
72. rims2a ENSDARG00000101606 1088 1.653 0.932 - - - - - 0.721 - - regulating synaptic membrane exocytosis 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1656]
73. mnx1 ENSDARG00000035984, ENSDARG00000109419 1014 1.651 0.944 - - - - - 0.707 - - motor neuron and pancreas homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040409-1]
74. vapb ENSDARG00000070435, ENSDARG00000112097 6469 1.65 - 0.895 - - - - 0.755 - - VAMP (vesicle-associated membrane protein)-associated protein B and C [Source:ZFIN;Acc:ZDB-GENE-030131-2348]
75. snrpd3l ENSDARG00000076283 7655 1.65 - - - - - 0.823 0.827 - - small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
76. rab14 ENSDARG00000074246 4084 1.649 - 0.918 - - - - 0.731 - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
77. dpysl3 ENSDARG00000002587 4381 1.649 - - - - - 0.893 0.756 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
78. lypla2 ENSDARG00000053656 8971 1.648 - - - - - 0.884 0.764 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
79. hmgb1b ENSDARG00000030479 10398 1.645 - - - - - 0.872 0.773 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
80. smarce1 ENSDARG00000016871 9628 1.645 - - - - - 0.782 0.863 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
81. COQ7 ENSDARG00000062594 989 1.644 - 0.929 - - - - 0.715 - - coenzyme Q7 homolog, ubiquinone (yeast) [Source:ZFIN;Acc:ZDB-GENE-070209-262]
82. rtn1b ENSDARG00000021143 1682 1.642 - - - - - 0.855 0.787 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
83. dnajc5aa ENSDARG00000042948 2885 1.641 - - - - - 0.866 0.775 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
84. tmsb ENSDARG00000054911 6411 1.638 - - - - - 0.827 0.811 - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
85. hmgb3a ENSDARG00000056725 15668 1.638 - - - - - 0.851 0.787 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
86. CHL1 CHL1 1553 1.635 - - - - - 0.823 0.812 - -
87. atp6v0cb ENSDARG00000036577 3472 1.635 - - - - - 0.871 0.764 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
88. rusc1 ENSDARG00000078125 617 1.635 - - - - - 0.863 0.772 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
89. gars ENSDARG00000059070 17015 1.631 0.909 - - - - - 0.722 - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
90. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.631 - - - - - 0.819 0.812 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
91. ANKRD11 ENSDARG00000051886 10024 1.629 - - - - - 0.764 0.865 - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
92. ZFHX3 ENSDARG00000103057 7759 1.626 - - - - - 0.847 0.779 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
93. camk1da ENSDARG00000074905, ENSDARG00000111604 479 1.624 - - - - - 0.835 0.789 - - calcium/calmodulin-dependent protein kinase 1Da [Source:ZFIN;Acc:ZDB-GENE-080402-7]
94. psma4 ENSDARG00000045928 5112 1.624 - 0.912 - - - - 0.712 - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
95. rbfox1 ENSDARG00000014746 2808 1.623 - - - - - 0.917 0.706 - - RNA binding fox-1 homolog 1 [Source:ZFIN;Acc:ZDB-GENE-040927-11]
96. EFCC1 ENSDARG00000077826 1359 1.618 - - - - - 0.826 0.792 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
97. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 1.618 - - - - - 0.833 0.785 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
98. sema6a ENSDARG00000102165 1401 1.618 - - - - - 0.795 0.823 - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:ZFIN;Acc:ZDB-GENE-030131-8004]
99. pak2b ENSDARG00000018476 4331 1.618 - - - - - 0.715 0.903 - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
100. uba1 ENSDARG00000037559 11579 1.617 - - - - - 0.831 0.786 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]

There are 1893 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA