Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hoxc6b

Gene Name Gene ID Reads Annotation
hoxc6b ENSDARG00000101954 967 homeobox C6b [Source:ZFIN;Acc:ZDB-GENE-000822-1]










Genes with expression patterns similar to hoxc6b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hoxc6b ENSDARG00000101954 967 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 homeobox C6b [Source:ZFIN;Acc:ZDB-GENE-000822-1]
2. CASK CASK 1750 1.756 - - - - - 0.888 0.868 - -
3. caly ENSDARG00000036008 1002 1.695 - - - - - 0.867 0.828 - - calcyon neuron-specific vesicular protein [Source:ZFIN;Acc:ZDB-GENE-090313-405]
4. DACT3_1 DACT3_1 1235 1.684 - - - - - 0.894 0.790 - -
5. fscn1a ENSDARG00000059680 3999 1.679 - - - - - 0.851 0.828 - - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
6. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 1.674 - - - - - 0.878 0.796 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
7. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.658 - - - - - 0.909 0.749 - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
8. flrt3 ENSDARG00000076895 3516 1.649 - 0.781 - - - 0.868 - - - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
9. prdm12b ENSDARG00000007430 914 1.647 0.809 - - - - 0.838 - - - PR domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-041114-172]
10. dpp6b ENSDARG00000024744 234 1.644 - 0.827 - - - 0.817 - - - dipeptidyl-peptidase 6b [Source:ZFIN;Acc:ZDB-GENE-070705-88]
11. hmp19 2554 1.64 0.829 - - - - 0.811 - - - HMP19 protein
12. ROBO3_1 ROBO3_1 468 1.631 0.770 - - - - 0.861 - - -
13. BX088524.2 ENSDARG00000103268 564 1.627 - 0.846 - - - 0.781 - - -
14. cnrip1a ENSDARG00000091683 1491 1.622 0.762 - - - - 0.860 - - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
15. gipc1 ENSDARG00000104483 2913 1.622 - 0.773 - - - 0.849 - - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
16. hoxb7a ENSDARG00000056030 1212 1.617 - 0.741 - - - 0.876 - - - homeobox B7a [Source:ZFIN;Acc:ZDB-GENE-000329-2]
17. zgc:114130 ENSDARG00000040725, ENSDARG00000116854 806 1.614 - 0.754 - - - 0.860 - - - zgc:114130 [Source:ZFIN;Acc:ZDB-GENE-050913-48]
18. usp42 ENSDARG00000077300 926 1.611 - 0.802 - - - - 0.809 - - ubiquitin specific peptidase 42 [Source:ZFIN;Acc:ZDB-GENE-030131-5739]
19. xpo7 ENSDARG00000005540, ENSDARG00000110221 4566 1.611 - - - - - 0.786 0.825 - - exportin 7 [Source:ZFIN;Acc:ZDB-GENE-060628-2]
20. cnot11 ENSDARG00000068596 829 1.607 - - - - - 0.860 0.747 - - CCR4-NOT transcription complex, subunit 11 [Source:ZFIN;Acc:ZDB-GENE-030131-8068]
21. myo1b ENSDARG00000024694 1761 1.604 - - - - - 0.812 0.792 - - myosin IB [Source:ZFIN;Acc:ZDB-GENE-030131-695]
22. CT025910.1 CT025910.1 143 1.604 0.744 - - - - 0.860 - - -
23. rangap1a ENSDARG00000041317 1456 1.599 - - - - - 0.833 0.766 - - RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]
24. klhl17 ENSDARG00000037324, ENSDARG00000115666 442 1.595 - 0.737 - - - 0.858 - - - kelch-like family member 17 [Source:ZFIN;Acc:ZDB-GENE-030131-8131]
25. mapk8ip2 ENSDARG00000063157 467 1.592 0.724 - - - - 0.868 - - - mitogen-activated protein kinase 8 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-326]
26. asap1b ENSDARG00000039729 842 1.589 - 0.752 - - - 0.837 - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1b [Source:ZFIN;Acc:ZDB-GENE-091112-16]
27. flrt1b ENSDARG00000075597 465 1.587 0.776 - - - - 0.811 - - - fibronectin leucine rich transmembrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-080327-6]
28. akap6 ENSDARG00000077295 1382 1.584 - 0.728 - - - 0.856 - - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
29. tnrc5 412 1.583 - 0.753 - - - 0.830 - - - trinucleotide repeat containing 5
30. tnika ENSDARG00000056218 728 1.582 - 0.702 - - - 0.880 - - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
31. hdgfrp2 7462 1.581 - 0.783 - - - 0.798 - - - hepatoma-derived growth factor-related protein 2, transcript variant X1
32. si:ch73-21g5.7 ENSDARG00000093156 9412 1.58 0.708 - - - - 0.872 - - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
33. mdkb ENSDARG00000020708 5393 1.577 - - - - - 0.834 0.743 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
34. slc6a1b ENSDARG00000039647 1301 1.574 0.706 - - - - 0.868 - - - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
35. spock3 ENSDARG00000070266, ENSDARG00000110158 934 1.574 0.738 - - - - 0.836 - - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
36. nrsn1 ENSDARG00000111235 123 1.572 0.771 - - - - 0.801 - - - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
37. cenpk ENSDARG00000039616 744 1.558 - - - - - 0.805 0.753 - - centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
38. SEMA7A ENSDARG00000078707 465 1.552 0.758 - - - - 0.794 - - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
39. gfap ENSDARG00000025301 5584 1.551 0.719 - - - - 0.832 - - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
40. mrps9 ENSDARG00000061505 1636 1.546 - 0.780 - - - 0.766 - - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
41. smarce1 ENSDARG00000016871 9628 1.543 - - - - - 0.767 0.776 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
42. b4galt2 ENSDARG00000077994 480 1.542 0.765 - - - - 0.777 - - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-070912-258]
43. slc1a3a ENSDARG00000104431 9888 1.541 - 0.756 - - - 0.785 - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
44. vps35 ENSDARG00000008224 13245 1.541 - - - - - 0.802 0.739 - - vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
45. tenm3 ENSDARG00000005479 3799 1.538 - - - - - 0.806 0.732 - - teneurin transmembrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-990714-19]
46. ric8a ENSDARG00000007247 229 1.537 0.732 - - - - 0.805 - - - RIC8 guanine nucleotide exchange factor A [Source:ZFIN;Acc:ZDB-GENE-040927-18]
47. syngr1a ENSDARG00000002564 209 1.537 0.742 - - - - 0.795 - - - synaptogyrin 1a [Source:ZFIN;Acc:ZDB-GENE-041010-169]
48. irx5b ENSDARG00000074070 459 1.533 0.751 - - - - 0.782 - - - iroquois homeobox 5b [Source:ZFIN;Acc:ZDB-GENE-040628-5]
49. sh3bp5lb 1090 1.532 - 0.733 - - - 0.799 - - - SH3-binding domain protein 5-like, b
50. brd7 ENSDARG00000008380 3654 1.531 - 0.762 - - - - 0.769 - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
51. hoxb5a ENSDARG00000013057 735 1.529 - - - - - 0.745 0.784 - - homeobox B5a [Source:ZFIN;Acc:ZDB-GENE-980526-70]
52. znf592 ENSDARG00000060885 776 1.528 - 0.787 - - - 0.741 - - - zinc finger protein 592 [Source:ZFIN;Acc:ZDB-GENE-030131-9613]
53. atg4c ENSDARG00000044373 979 1.528 - - - - - 0.787 0.741 - - autophagy related 4C, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-040625-84]
54. ints3 ENSDARG00000016811 339 1.521 - - - - - 0.770 0.751 - - integrator complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-060503-634]
55. nrarpb ENSDARG00000018958 6225 1.521 0.782 - - - - 0.739 - - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
56. eif3hb ENSDARG00000036116 203 1.518 0.721 - - - - 0.797 - - - eukaryotic translation initiation factor 3, subunit H, b [Source:ZFIN;Acc:ZDB-GENE-051030-42]
57. rtn1b ENSDARG00000021143 1682 1.517 - - - - - 0.814 0.703 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
58. hnrnpub ENSDARG00000004735 16496 1.516 - - - - - 0.805 0.711 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
59. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.516 - - - - - 0.779 0.737 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
60. aatf ENSDARG00000025467, ENSDARG00000109548 796 1.514 - 0.731 - - - - 0.783 - - apoptosis antagonizing transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-9654]
61. tox ENSDARG00000032317 9126 1.513 0.790 - - - - 0.723 - - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
62. EFCC1 ENSDARG00000077826 1359 1.508 0.743 - - - - 0.765 - - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
63. senp6a ENSDARG00000102923 908 1.508 - - - - - 0.733 0.775 - - SUMO specific peptidase 6a [Source:ZFIN;Acc:ZDB-GENE-080204-25]
64. hmgb3a ENSDARG00000056725 15668 1.505 - - - - - 0.777 0.728 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
65. fam60al 2846 1.505 - - - - - 0.797 0.708 - - family with sequence similarity 60, member A, like
66. bach2b ENSDARG00000004074 1079 1.505 - 0.706 - - - 0.799 - - - BTB and CNC homology 1, basic leucine zipper transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-041001-139]
67. rgs3a ENSDARG00000099746 727 1.501 - - - - - 0.736 0.765 - - regulator of G protein signaling 3a [Source:ZFIN;Acc:ZDB-GENE-040801-150]
68. slc9a7 ENSDARG00000076754 599 1.497 - - - - - 0.710 0.787 - - solute carrier family 9, subfamily A (NHE7, cation proton antiporter 7), member 7 [Source:ZFIN;Acc:ZDB-GENE-050913-8]
69. AKT3 AKT3 1729 1.491 0.713 - - - - 0.778 - - -
70. rgmd ENSDARG00000034013, ENSDARG00000111872 4752 1.482 0.730 - - - - 0.752 - - - RGM domain family, member D [Source:ZFIN;Acc:ZDB-GENE-030131-561]
71. PRIMA1 PRIMA1 459 1.48 - 0.737 - - - 0.743 - - -
72. dtna ENSDARG00000031015 1746 1.479 - 0.722 - - - 0.757 - - - dystrobrevin, alpha [Source:ZFIN;Acc:ZDB-GENE-070117-2]
73. frmd6 ENSDARG00000002332 2698 1.477 - 0.729 - - - - 0.748 - - FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
74. ccdc6a ENSDARG00000043334, ENSDARG00000112924 1774 1.474 - - - - - 0.756 0.718 - - coiled-coil domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-7848]
75. cadm4 ENSDARG00000040291 2284 1.473 - - - - - 0.739 0.734 - - cell adhesion molecule 4 [Source:ZFIN;Acc:ZDB-GENE-041114-138]
76. calm1a ENSDARG00000021811 4791 1.473 - - - - - 0.724 0.749 - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
77. pcyt1aa ENSDARG00000011233 1985 1.471 - 0.732 - - - 0.739 - - - phosphate cytidylyltransferase 1, choline, alpha a [Source:ZFIN;Acc:ZDB-GENE-050417-108]
78. vdac1 ENSDARG00000045132 8051 1.471 - - - - - 0.719 0.752 - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
79. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.47 0.739 0.731 - - - - - - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
80. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 1.469 0.761 - - - - 0.708 - - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
81. vim ENSDARG00000010008 3551 1.468 0.763 - - - - 0.705 - - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
82. SLC36A4 ENSDARG00000039661 175 1.466 - - - - - 0.745 0.721 - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
83. tnc ENSDARG00000021948, ENSDARG00000113518 12162 1.464 - 0.718 - - - 0.746 - - - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
84. nova2 ENSDARG00000017673 7685 1.457 0.756 - - - - 0.701 - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
85. ssbp3b ENSDARG00000030155 7163 1.457 - - - - - 0.737 0.720 - - single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
86. lpl ENSDARG00000087697 2578 1.456 - 0.705 - - - 0.751 - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
87. ccdc28b ENSDARG00000011222 528 1.455 0.746 - - - - 0.709 - - - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
88. pcsk1 ENSDARG00000002600 404 1.444 - - - - - 0.717 0.727 - - proprotein convertase subtilisin/kexin type 1 [Source:ZFIN;Acc:ZDB-GENE-071009-1]
89. arglu1a ENSDARG00000019223 8716 1.444 - - - - - 0.712 0.732 - - arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
90. mta2 ENSDARG00000013031 2932 1.433 - 0.712 - - - - 0.721 - - metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
91. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 1.433 0.719 - - - - 0.714 - - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
92. adnp2b ENSDARG00000028431 4683 1.414 - - - - - 0.704 0.710 - - ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
93. igsf9a ENSDARG00000075864 1870 0.931 - - - - - 0.931 - - - immunoglobulin superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060503-288]
94. zgc:91860 ENSDARG00000041599, ENSDARG00000110489 669 0.924 - - - - - 0.924 - - - zgc:91860 [Source:ZFIN;Acc:ZDB-GENE-040704-34]
95. epb41l5 ENSDARG00000032324, ENSDARG00000114579 1610 0.921 - - - - - 0.921 - - - erythrocyte membrane protein band 4.1 like 5 [Source:ZFIN;Acc:ZDB-GENE-030616-450]
96. cd99l2 ENSDARG00000056722 5036 0.919 - - - - - 0.919 - - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
97. RBM6 ENSDARG00000077060 3521 0.918 - - - - - 0.918 - - - RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
98. stmn4 ENSDARG00000030106 518 0.913 - - - - - 0.913 - - - stathmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2732]
99. nin ENSDARG00000060298 1558 0.912 - - - - - 0.912 - - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
100. fgd 377 0.911 - - - - - 0.911 - - - faciogenital dysplasia

There are 1767 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA