Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hoxc5a

Gene Name Gene ID Reads Annotation
hoxc5a ENSDARG00000070340 436 homeobox C5a [Source:ZFIN;Acc:ZDB-GENE-980526-533]










Genes with expression patterns similar to hoxc5a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hoxc5a ENSDARG00000070340 436 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 homeobox C5a [Source:ZFIN;Acc:ZDB-GENE-980526-533]
2. hoxb5a ENSDARG00000013057 735 2.36 - - - - 0.730 - - 0.712 0.918 homeobox B5a [Source:ZFIN;Acc:ZDB-GENE-980526-70]
3. rab3da ENSDARG00000018107 28 1.669 - - - - - 0.734 0.935 - - RAB3D, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-080722-14]
4. srbd1 ENSDARG00000079827 154 1.654 - 0.899 - - - 0.755 - - - S1 RNA binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-081107-19]
5. epb41b ENSDARG00000029019 1472 1.586 - - - - - - - 0.818 0.768 erythrocyte membrane protein band 4.1b [Source:ZFIN;Acc:ZDB-GENE-030130-1]
6. immp1l ENSDARG00000045935 175 1.574 - 0.861 - - - 0.713 - - - inner mitochondrial membrane peptidase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-070522-4]
7. gabbr2 ENSDARG00000061042 122 1.571 0.778 - - - - 0.793 - - - gamma-aminobutyric acid (GABA) B receptor, 2 [Source:ZFIN;Acc:ZDB-GENE-060503-620]
8. ep300a ENSDARG00000100666 224 1.551 - - - - - 0.760 0.791 - - E1A binding protein p300 a [Source:ZFIN;Acc:ZDB-GENE-080403-16]
9. foxg1c ENSDARG00000068380, ENSDARG00000114414 25 1.55 - - - - - 0.740 0.810 - - forkhead box G1c [Source:ZFIN;Acc:ZDB-GENE-050419-26]
10. otof otof 127 1.539 0.818 - - - - 0.721 - - -
11. ENSDARG00000078787 ENSDARG00000078787 97 1.53 - - - - - 0.737 - - 0.793
12. si:ch211-239f4.4 si:ch211-239f4.4 12 1.526 - - - - - 0.734 - - 0.792
13. acot9.2 ENSDARG00000058390, ENSDARG00000113544 438 1.514 - 0.790 - - - - 0.724 - - acyl-CoA thioesterase 9, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-051113-136]
14. ufl1 ENSDARG00000007496 177 1.478 - 0.744 - - - 0.734 - - - UFM1-specific ligase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1163]
15. FILIP1 339 1.467 - 0.724 - - - 0.743 - - - filamin A interacting protein 1
16. PEG3_4 PEG3_4 256 1.465 - - - - - 0.722 0.743 - -
17. klfd klfd 625 1.465 - - - - - - - 0.758 0.707
18. hoxb6b ENSDARG00000026513, ENSDARG00000111786 544 1.431 - - - - - - - 0.710 0.721 homeobox B6b [Source:ZFIN;Acc:ZDB-GENE-000823-7]
19. cpeb1b ENSDARG00000008454 37 0.96 - - - - - - 0.960 - - cytoplasmic polyadenylation element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-990927-1]
20. si:dkey-27n6.9 51 0.941 - 0.941 - - - - - - - si:dkey-27n6.9, transcript variant X4
21. CABZ01073405.1 CABZ01073405.1 275 0.938 - - - - - 0.938 - - -
22. U1_25 U1_25 283 0.92 - 0.920 - - - - - - -
23. POLRMT ENSDARG00000101220 215 0.919 - - - - - - 0.919 - - polymerase (RNA) mitochondrial (DNA directed) [Source:ZFIN;Acc:ZDB-GENE-030131-1528]
24. bmi1b ENSDARG00000013076 1020 0.915 - - - - - 0.915 - - - bmi1 polycomb ring finger oncogene 1b [Source:ZFIN;Acc:ZDB-GENE-040116-4]
25. si:ch73-382f3.1 ENSDARG00000093833 295 0.907 - - - - - 0.907 - - - si:ch73-382f3.1 [Source:ZFIN;Acc:ZDB-GENE-030131-9513]
26. BCL6B ENSDARG00000069335 602 0.906 - 0.906 - - - - - - - B-cell CLL/lymphoma 6, member B [Source:ZFIN;Acc:ZDB-GENE-120907-1]
27. TSHZ2 ENSDARG00000079201 301 0.904 - - - - - 0.904 - - - teashirt zinc finger homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-100322-2]
28. hoxb5b ENSDARG00000054030, ENSDARG00000113174 808 0.903 - - - - - - - - 0.903 homeobox B5b [Source:ZFIN;Acc:ZDB-GENE-000823-6]
29. rhbdd1 ENSDARG00000021046 120 0.902 - - - - - - 0.902 - - rhomboid domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-85]
30. si:ch211-113a14.19 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 22 0.895 - 0.895 - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
31. cyp2p6 ENSDARG00000042978 46 0.895 - 0.895 - - - - - - - cytochrome P450, family 2, subfamily P, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-790]
32. APOLD1 APOLD1 56 0.888 - - - - - - 0.888 - -
33. bcl11aa ENSDARG00000061352 61 0.888 - - - - - - 0.888 - - B cell CLL/lymphoma 11Aa [Source:ZFIN;Acc:ZDB-GENE-060421-4643]
34. SLX1A SLX1A 15 0.888 - - - - - - 0.888 - -
35. dmrt2b ENSDARG00000070013, ENSDARG00000114365, ENSDARG00000114967 57 0.888 - - - - - - 0.888 - - doublesex and mab-3 related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-080813-1]
36. hic1 ENSDARG00000055493 219 0.888 - - - - - - 0.888 - - hypermethylated in cancer 1 [Source:ZFIN;Acc:ZDB-GENE-040713-2]
37. drc1 ENSDARG00000042182 39 0.888 - - - - - - 0.888 - - dynein regulatory complex subunit 1 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-041001-218]
38. glrx2 ENSDARG00000100944, ENSDARG00000110094 151 0.884 - - - - - 0.884 - - - glutaredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040718-101]
39. zgc:66447 ENSDARG00000025577, ENSDARG00000111229 744 0.881 - - - - - 0.881 - - - zgc:66447 [Source:ZFIN;Acc:ZDB-GENE-030131-4748]
40. vrk2 ENSDARG00000021547 45 0.881 - 0.881 - - - - - - - vaccinia related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1046]
41. sphkap ENSDARG00000017429 60 0.88 - - - - - 0.880 - - - SPHK1 interactor, AKAP domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-32]
42. si:dkey-220o10.1 si:dkey-220o10.1 63 0.879 - 0.879 - - - - - - -
43. LRRC71 LRRC71 11 0.879 - 0.879 - - - - - - -
44. wdr45l wdr45l 123 0.879 - 0.879 - - - - - - -
45. si:ch211-254p10.3 si:ch211-254p10.3 5 0.879 - 0.879 - - - - - - -
46. kif6 ENSDARG00000053240 75 0.879 - 0.879 - - - - - - - kinesin family member 6 [Source:ZFIN;Acc:ZDB-GENE-061027-130]
47. poglut1 ENSDARG00000053463 738 0.877 - 0.877 - - - - - - - protein O-glucosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051120-24]
48. TRMT12 ENSDARG00000060338 58 0.877 - - - - - - - - 0.877 tRNA methyltransferase 12 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-182]
49. EPS15L1 EPS15L1 22 0.871 - 0.871 - - - - - - -
50. fam193a ENSDARG00000102787 617 0.867 - - - - - 0.867 - - - family with sequence similarity 193, member A [Source:ZFIN;Acc:ZDB-GENE-080917-25]
51. si:ch211-209j10.6 ENSDARG00000093317 126 0.866 - - - - - 0.866 - - - si:ch211-209j10.6 [Source:ZFIN;Acc:ZDB-GENE-090311-44]
52. eral1 ENSDARG00000059887 149 0.863 - - - - - - 0.863 - - Era-like 12S mitochondrial rRNA chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-060526-84]
53. wdr11 ENSDARG00000075245 743 0.862 - - - - - 0.862 - - - WD repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-081107-28]
54. ECEL1 ENSDARG00000060549 62 0.86 - - - - - 0.860 - - - endothelin converting enzyme-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-692]
55. hoxc1a ENSDARG00000070337 1460 0.86 - - - - - - - - 0.860 homeobox C1a [Source:ZFIN;Acc:ZDB-GENE-000822-2]
56. ppm1ab ENSDARG00000043250 772 0.859 - - - - - 0.859 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Ab [Source:ZFIN;Acc:ZDB-GENE-991102-14]
57. si:ch1073-127d16.1 ENSDARG00000087674 105 0.859 - - - - - - 0.859 - - si:ch1073-127d16.1 [Source:ZFIN;Acc:ZDB-GENE-120214-30]
58. cacna1sb ENSDARG00000042552 1320 0.858 - 0.858 - - - - - - - calcium channel, voltage-dependent, L type, alpha 1S subunit, b [Source:ZFIN;Acc:ZDB-GENE-051227-1]
59. ifitm5 ENSDARG00000105153 132 0.855 - - - - - - - - 0.855 interferon induced transmembrane protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-8970]
60. CU633908.1 ENSDARG00000113928 222 0.855 - 0.855 - - - - - - - beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) b [Source:NCBI gene;Acc:100332644]
61. si:ch211-253p2.2 ENSDARG00000071772 64 0.855 - - - - - 0.855 - - - si:ch211-253p2.2 [Source:ZFIN;Acc:ZDB-GENE-041111-272]
62. myh7bb ENSDARG00000035322 287 0.855 - 0.855 - - - - - - - myosin, heavy chain 7B, cardiac muscle, beta b [Source:ZFIN;Acc:ZDB-GENE-090311-5]
63. pax7b ENSDARG00000070818 282 0.854 - 0.854 - - - - - - - paired box 7b [Source:ZFIN;Acc:ZDB-GENE-080917-54]
64. adcy6a ENSDARG00000061445, ENSDARG00000114782 500 0.853 - - - - - 0.853 - - - adenylate cyclase 6a [Source:ZFIN;Acc:ZDB-GENE-060221-1]
65. adgb ENSDARG00000005595 118 0.851 - - - - - - 0.851 - - androglobin [Source:ZFIN;Acc:ZDB-GENE-041001-205]
66. kctd1 ENSDARG00000074056 652 0.85 - 0.850 - - - - - - - potassium channel tetramerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040724-194]
67. slco5a1 slco5a1 383 0.849 - - - - - - 0.849 - -
68. trpc1 ENSDARG00000061203 62 0.848 - - - - - 0.848 - - - transient receptor potential cation channel, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-070830-1]
69. si:ch73-269m14.3 ENSDARG00000096305 28 0.847 - - - - - - 0.847 - - si:ch73-269m14.3 [Source:ZFIN;Acc:ZDB-GENE-120215-13]
70. si:ch73-308b14.1 si:ch73-308b14.1 1106 0.847 - 0.847 - - - - - - -
71. FBXO38 ENSDARG00000006924 307 0.846 - - - - - 0.846 - - - F-box protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-2797]
72. ITPR1 ITPR1 161 0.845 - - - - - 0.845 - - -
73. pagr1 ENSDARG00000076966 1430 0.845 - - - - - 0.845 - - - PAXIP1 associated glutamate-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4801]
74. stk11ip ENSDARG00000070122, ENSDARG00000111986 199 0.843 - 0.843 - - - - - - - serine/threonine kinase 11 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-1022]
75. si:dkey-4c15.12 ENSDARG00000095350 119 0.841 - 0.841 - - - - - - - si:dkey-4c15.12 [Source:ZFIN;Acc:ZDB-GENE-050420-351]
76. tm4sf4 ENSDARG00000040747 65 0.84 - - - - - - - - 0.840 transmembrane 4 L six family member 4 [Source:ZFIN;Acc:ZDB-GENE-040801-231]
77. tulp4 tulp4 1520 0.839 - - - - - 0.839 - - -
78. asb8 ENSDARG00000003383 733 0.839 - 0.839 - - - - - - - ankyrin repeat and SOCS box containing 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5411]
79. si:rp71-84d19.2 si:rp71-84d19.2 34 0.839 - 0.839 - - - - - - -
80. tspan12 ENSDARG00000032389 419 0.839 - 0.839 - - - - - - - tetraspanin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1285]
81. RNF214 RNF214 816 0.838 - 0.838 - - - - - - -
82. UBAC2_1 UBAC2_1 23 0.838 - 0.838 - - - - - - -
83. SLC35A3_1 SLC35A3_1 35 0.833 - 0.833 - - - - - - -
84. pdx1 ENSDARG00000002779, ENSDARG00000109275 28 0.833 - 0.833 - - - - - - - pancreatic and duodenal homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-122]
85. pax6l pax6l 54 0.833 - 0.833 - - - - - - -
86. paqr3b ENSDARG00000044253, ENSDARG00000110049 381 0.833 - 0.833 - - - - - - - progestin and adipoQ receptor family member IIIb [Source:ZFIN;Acc:ZDB-GENE-050913-128]
87. CT030712.1 ENSDARG00000044355 83 0.833 - 0.833 - - - - - - - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
88. nptx2b ENSDARG00000045164 5 0.833 - 0.833 - - - - - - - neuronal pentraxin IIb [Source:ZFIN;Acc:ZDB-GENE-110328-1]
89. TDRD7B ENSDARG00000077523 124 0.833 - 0.833 - - - - - - - tudor domain containing 7 b [Source:ZFIN;Acc:ZDB-GENE-150109-14]
90. ocrl ENSDARG00000078106, ENSDARG00000115715, ENSDARG00000117019 90 0.833 - 0.833 - - - - - - - oculocerebrorenal syndrome of Lowe [Source:ZFIN;Acc:ZDB-GENE-061110-61]
91. prr15lb ENSDARG00000029308, ENSDARG00000110636 25 0.833 - 0.833 - - - - - - - proline rich 15-like b [Source:ZFIN;Acc:ZDB-GENE-050417-201]
92. nlgn1 ENSDARG00000077710 72 0.833 - 0.833 - - - - - - - neuroligin 1 [Source:ZFIN;Acc:ZDB-GENE-090918-1]
93. NOX4_1 NOX4_1 2 0.832 - - - - - - - - 0.832
94. si:busm1-57f23.1 ENSDARG00000074425 418 0.831 0.831 - - - - - - - - si:busm1-57f23.1 [Source:ZFIN;Acc:ZDB-GENE-030616-512]
95. si:ch211-113p18.3 ENSDARG00000087835 377 0.831 - - - - - 0.831 - - - si:ch211-113p18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4983]
96. fbxl5 ENSDARG00000043046 1403 0.83 - - - - - 0.830 - - - F-box and leucine-rich repeat protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-900]
97. METTL4 ENSDARG00000088999 160 0.828 - - - - - 0.828 - - - methyltransferase like 4 [Source:ZFIN;Acc:ZDB-GENE-130129-2]
98. colq ENSDARG00000019692 656 0.828 - 0.828 - - - - - - - collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-110411-119]
99. kcnj1a.1 ENSDARG00000091232 110 0.828 - 0.828 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031118-55]
100. ZNF135_5 ZNF135_5 73 0.828 - - - - - 0.828 - - -

There are 512 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA