Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hoxc3a

Gene Name Gene ID Reads Annotation
hoxc3a ENSDARG00000070339 3379 homeobox C3a [Source:ZFIN;Acc:ZDB-GENE-980526-532]










Genes with expression patterns similar to hoxc3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hoxc3a ENSDARG00000070339 3379 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 homeobox C3a [Source:ZFIN;Acc:ZDB-GENE-980526-532]
2. ddx6 ENSDARG00000061338 2514 2.833 - 0.992 - - - 0.988 - - 0.853 DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83]
3. plekhh1 ENSDARG00000053835 2123 2.76 - - - - - 0.985 0.928 - 0.847 pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
4. socs3a ENSDARG00000025428 349 2.701 - - - 0.804 - 0.981 0.916 - - suppressor of cytokine signaling 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7349]
5. zgc:162356 zgc:162356 5115 2.583 - - - - - 0.969 0.762 - 0.852
6. gltscr2 gltscr2 5763 2.572 - 0.978 - - - - 0.888 - 0.706
7. calm2b 3890 1.964 - 0.994 - - - - 0.970 - - calmodulin 2b, (phosphorylase kinase, delta)
8. rnf183 ENSDARG00000068851 2427 1.949 - 0.973 - - - 0.976 - - - ring finger protein 183 [Source:ZFIN;Acc:ZDB-GENE-060929-1090]
9. uqcrfs1 ENSDARG00000007745 4654 1.932 - 0.994 - - - - 0.938 - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
10. abcb7 ENSDARG00000062795 1404 1.922 - 0.996 - - - - 0.926 - - ATP-binding cassette, sub-family B (MDR/TAP), member 7 [Source:ZFIN;Acc:ZDB-GENE-050517-10]
11. slc43a1a ENSDARG00000037393, ENSDARG00000113118 5797 1.919 - 0.991 - - - - 0.928 - - solute carrier family 43 (amino acid system L transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6327]
12. tmem181 ENSDARG00000045910 2288 1.916 - 0.989 - - - - 0.927 - - transmembrane protein 181 [Source:ZFIN;Acc:ZDB-GENE-060503-309]
13. glyr1 ENSDARG00000099213 6906 1.893 - 0.970 - - - - 0.923 - - glyoxylate reductase 1 homolog (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-041121-5]
14. NDUFA3 ENSDARG00000041400 7939 1.887 - 0.971 - - - - 0.916 - - NADH:ubiquinone oxidoreductase subunit A3 [Source:ZFIN;Acc:ZDB-GENE-040801-18]
15. cdc42l ENSDARG00000040158, ENSDARG00000116748 11671 1.886 - 0.908 - - - 0.978 - - - cell division cycle 42, like [Source:ZFIN;Acc:ZDB-GENE-030131-6069]
16. atl3 ENSDARG00000004270 2806 1.858 - 0.978 - - - - 0.880 - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
17. cdipt ENSDARG00000070686 1318 1.826 - 0.993 - - - - - - 0.833 CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) [Source:ZFIN;Acc:ZDB-GENE-040426-2536]
18. ppp2r5eb ENSDARG00000069118 1902 1.812 - - - - - 0.981 - - 0.831 protein phosphatase 2, regulatory subunit B', epsilon isoform b [Source:ZFIN;Acc:ZDB-GENE-030904-6]
19. FAM110D FAM110D 3632 1.806 - 0.920 - - - - 0.886 - -
20. si:dkey-193p11.2 ENSDARG00000096712 3500 1.804 - 0.958 - - - - 0.846 - - si:dkey-193p11.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8407]
21. lix1l ENSDARG00000063244 2061 1.798 - 0.991 - - - - - - 0.807 limb and CNS expressed 1 like [Source:ZFIN;Acc:ZDB-GENE-060503-777]
22. dctn3 ENSDARG00000041363 3351 1.788 - - - - - 0.978 - - 0.810 dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
23. CABZ01078889.1 CABZ01078889.1 911 1.768 - - - - - - 0.937 - 0.831
24. dnajb9a ENSDARG00000052072 578 1.768 - - - - - - 0.919 - 0.849 DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
25. ap2b1 ENSDARG00000035152 2912 1.766 - 0.993 - - - - - - 0.773 adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
26. plp1a ENSDARG00000103732 3544 1.766 0.773 0.993 - - - - - - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
27. fam133b ENSDARG00000013863 5070 1.758 - 0.996 - - - - - - 0.762 family with sequence similarity 133, member B [Source:ZFIN;Acc:ZDB-GENE-060503-229]
28. eif5 ENSDARG00000003681 7986 1.758 - 0.993 - - - - - - 0.765 eukaryotic translation initiation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-975]
29. rarga ENSDARG00000034117 1238 1.748 - 0.992 - - - - - - 0.756 retinoic acid receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-531]
30. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 1.736 0.742 0.994 - - - - - - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
31. PCBP4 ENSDARG00000024276 3194 1.735 0.742 - - - - 0.993 - - - poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
32. kmt2a ENSDARG00000004537 2169 1.731 0.794 - - - - - 0.937 - - lysine (K)-specific methyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080521-3]
33. zgc:92107 ENSDARG00000044874, ENSDARG00000115497 5938 1.73 0.793 - - - - - 0.937 - - zgc:92107 [Source:ZFIN;Acc:ZDB-GENE-041114-4]
34. clvs2 ENSDARG00000053122 1390 1.726 0.733 - - - - 0.993 - - - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
35. cnksr1 ENSDARG00000032932, ENSDARG00000109531 2272 1.718 - - - - - - 0.877 - 0.841 connector enhancer of kinase suppressor of Ras 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1802]
36. CABZ01070258.1 ENSDARG00000105687 3643 1.718 0.723 - - - - 0.995 - - -
37. rab11al ENSDARG00000014340 2116 1.717 - - - - - - 0.851 - 0.866 RAB11a, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-031118-188]
38. illr4 ENSDARG00000008075 164 1.711 - - - 0.792 - - 0.919 - - immune-related, lectin-like receptor 4 [Source:ZFIN;Acc:ZDB-GENE-050311-5]
39. myo1c myo1c 4978 1.707 - 0.907 - - - - 0.800 - -
40. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 1.705 - 0.933 - - - 0.772 - - - actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
41. eif4g2a ENSDARG00000020377, ENSDARG00000112658 6895 1.701 - 0.983 - - - - - - 0.718 eukaryotic translation initiation factor 4, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-2173]
42. adipor1b ENSDARG00000042717 1348 1.693 - - - - - - 0.906 - 0.787 adiponectin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2896]
43. nr0b2a ENSDARG00000044685 2508 1.682 - - - - - 0.957 0.725 - - nuclear receptor subfamily 0, group B, member 2a [Source:ZFIN;Acc:ZDB-GENE-080403-1]
44. PTS ENSDARG00000045269 2185 1.679 0.743 - - - - - 0.936 - - 6-pyruvoyltetrahydropterin synthase [Source:ZFIN;Acc:ZDB-GENE-070615-3]
45. mapta ENSDARG00000089314 2038 1.676 0.727 - - - - - 0.949 - - microtubule-associated protein tau a [Source:ZFIN;Acc:ZDB-GENE-081027-1]
46. klc2 3058 1.674 0.724 - - - - - 0.950 - - kinesin light chain 2
47. basp1 ENSDARG00000053358, ENSDARG00000110677 2590 1.674 0.722 - - - - - 0.952 - - brain abundant, membrane attached signal protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-158]
48. pgam1a ENSDARG00000005423 3986 1.671 - - - - - - 0.881 - 0.790 phosphoglycerate mutase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1827]
49. cux2a 493 1.661 0.743 - - - - - 0.918 - - cut-like homeobox 2a
50. socs5a ENSDARG00000100717 6927 1.653 0.711 - - - - - 0.942 - - suppressor of cytokine signaling 5a [Source:ZFIN;Acc:ZDB-GENE-061013-408]
51. gmps ENSDARG00000079848 8217 1.652 0.716 - - - - - 0.936 - - guanine monophosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1503]
52. lmnb2 ENSDARG00000101624 11304 1.651 - 0.911 - - - - 0.740 - - lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
53. cope ENSDARG00000018562 17276 1.65 - - - - - - 0.897 - 0.753 coatomer protein complex, subunit epsilon [Source:ZFIN;Acc:ZDB-GENE-041114-59]
54. col6a1 ENSDARG00000074908 2339 1.641 - - - - - - 0.879 - 0.762 collagen, type VI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-070501-6]
55. kif5ba ENSDARG00000074131, ENSDARG00000103394 5232 1.64 - - - - - - 0.901 - 0.739 kinesin family member 5B, a [Source:ZFIN;Acc:ZDB-GENE-070629-2]
56. aco2 ENSDARG00000007294, ENSDARG00000111879 5162 1.631 - - - - - 0.787 - - 0.844 aconitase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-1390]
57. grpel2 ENSDARG00000069421 5673 1.628 - - - - - 0.861 - - 0.767 GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
58. tuba8l3 ENSDARG00000070155 7525 1.619 0.745 - - - - - 0.874 - - tubulin, alpha 8 like 3 [Source:ZFIN;Acc:ZDB-GENE-040801-77]
59. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 1.617 0.764 - - - - - 0.853 - - cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
60. rassf8b ENSDARG00000045485 1568 1.596 - - - 0.792 - - - - 0.804 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8b [Source:ZFIN;Acc:ZDB-GENE-040426-1338]
61. si:dkey-87o1.2 ENSDARG00000095796 6602 1.593 - 0.837 - - - - 0.756 - - si:dkey-87o1.2 [Source:ZFIN;Acc:ZDB-GENE-110411-217]
62. BX511121.1 ENSDARG00000029997 1774 1.578 - - - 0.744 - - - - 0.834
63. si:dkey-235d18.5 ENSDARG00000039652 667 1.573 - - - - - - 0.855 0.718 - si:dkey-235d18.5 [Source:ZFIN;Acc:ZDB-GENE-041014-243]
64. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 1.567 0.717 - - - - - - - 0.850 solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
65. qdpra ENSDARG00000040190 4064 1.567 0.741 - - - - - - - 0.826 quinoid dihydropteridine reductase a [Source:ZFIN;Acc:ZDB-GENE-070705-197]
66. emilin3a ENSDARG00000078052 1652 1.563 - - - 0.816 - - - - 0.747 elastin microfibril interfacer 3a [Source:ZFIN;Acc:ZDB-GENE-080612-2]
67. uqcc uqcc 4742 1.549 - - - - - - 0.806 - 0.743
68. sox3 ENSDARG00000053569 12016 1.527 0.740 - - - - - 0.787 - - SRY (sex determining region Y)-box 3 [Source:ZFIN;Acc:ZDB-GENE-980526-333]
69. urah urah 4152 1.526 - - - - - - 0.753 - 0.773
70. aplp2 ENSDARG00000054864 7958 1.509 - - - 0.756 - - - - 0.753 amyloid beta (A4) precursor-like protein 2 [Source:ZFIN;Acc:ZDB-GENE-061009-28]
71. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 1.493 0.708 - - - - - - - 0.785 regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
72. plagx ENSDARG00000036855 3768 0.997 - 0.997 - - - - - - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
73. ZNF70_11 ZNF70_11 1246 0.996 - 0.996 - - - - - - -
74. MRPS36 ENSDARG00000079823, ENSDARG00000113427 3694 0.996 - 0.996 - - - - - - - mitochondrial ribosomal protein S36 [Source:ZFIN;Acc:ZDB-GENE-081104-343]
75. axin1 ENSDARG00000102964 1710 0.996 - 0.996 - - - - - - - axin 1 [Source:ZFIN;Acc:ZDB-GENE-000403-1]
76. arf6a ENSDARG00000101626 2959 0.996 - 0.996 - - - - - - - ADP-ribosylation factor 6a [Source:ZFIN;Acc:ZDB-GENE-030131-8007]
77. agtpbp1 ENSDARG00000105214 1038 0.996 - 0.996 - - - - - - - ATP/GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-267]
78. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 0.994 - 0.994 - - - - - - - APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
79. fam192a ENSDARG00000041631 4113 0.994 - 0.994 - - - - - - - family with sequence similarity 192, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6692]
80. glo1 ENSDARG00000068978 1384 0.994 - 0.994 - - - - - - - glyoxalase 1 [Source:ZFIN;Acc:ZDB-GENE-030722-9]
81. ogfr ENSDARG00000037837 1001 0.994 - 0.994 - - - - - - - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
82. glrx5 ENSDARG00000043665 2687 0.994 - 0.994 - - - - - - - glutaredoxin 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1957]
83. txndc9 ENSDARG00000069853, ENSDARG00000110688 1519 0.994 - 0.994 - - - - - - - thioredoxin domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8569]
84. pcp4a ENSDARG00000053130 1024 0.994 - - - - - 0.994 - - - Purkinje cell protein 4a [Source:ZFIN;Acc:ZDB-GENE-031118-105]
85. hoxa5a ENSDARG00000102501 1667 0.994 - 0.994 - - - - - - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
86. arl2 ENSDARG00000069496, ENSDARG00000112191 1389 0.994 - 0.994 - - - - - - - ADP-ribosylation factor-like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-19]
87. naa15b ENSDARG00000030368 535 0.994 - 0.994 - - - - - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-6031]
88. cenpe ENSDARG00000063385 4428 0.994 - 0.994 - - - - - - - centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
89. PRKAG2 PRKAG2 688 0.994 - 0.994 - - - - - - -
90. cnot11 ENSDARG00000068596 829 0.994 - 0.994 - - - - - - - CCR4-NOT transcription complex, subunit 11 [Source:ZFIN;Acc:ZDB-GENE-030131-8068]
91. aes ENSDARG00000021805, ENSDARG00000115836 1533 0.994 - 0.994 - - - - - - - amino-terminal enhancer of split [Source:ZFIN;Acc:ZDB-GENE-040426-1409]
92. lsm1 ENSDARG00000043177 767 0.993 - 0.993 - - - - - - - LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]
93. recql ENSDARG00000007175 501 0.993 - 0.993 - - - - - - - RecQ helicase-like [Source:ZFIN;Acc:ZDB-GENE-050809-134]
94. PPFIBP1_1 PPFIBP1_1 2256 0.993 - 0.993 - - - - - - -
95. ms4a17a.7 ENSDARG00000043796 352 0.993 - 0.993 - - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.7 [Source:ZFIN;Acc:ZDB-GENE-080829-2]
96. stim1a ENSDARG00000060723 1200 0.993 - 0.993 - - - - - - - stromal interaction molecule 1a [Source:ZFIN;Acc:ZDB-GENE-060503-914]
97. klhl20 ENSDARG00000038801 936 0.993 - 0.993 - - - - - - - kelch-like family member 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1935]
98. igf1rb ENSDARG00000034434, ENSDARG00000110935 813 0.993 - 0.993 - - - - - - - insulin-like growth factor 1b receptor [Source:ZFIN;Acc:ZDB-GENE-020503-2]
99. prkcea ENSDARG00000003008 1118 0.993 - 0.993 - - - - - - - protein kinase C, epsilon a [Source:ZFIN;Acc:ZDB-GENE-030131-8191]
100. RMDN2 ENSDARG00000078761 717 0.993 - 0.993 - - - - - - - regulator of microtubule dynamics 2 [Source:ZFIN;Acc:ZDB-GENE-111223-1]

There are 1377 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA