Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hoxc13a

Gene Name Gene ID Reads Annotation
hoxc13a ENSDARG00000070353 4815 homeobox C13a [Source:ZFIN;Acc:ZDB-GENE-000822-4]










Genes with expression patterns similar to hoxc13a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hoxc13a ENSDARG00000070353 4815 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 homeobox C13a [Source:ZFIN;Acc:ZDB-GENE-000822-4]
2. crabp1b ENSDARG00000035904 2753 3.275 - - - 0.886 0.887 - - 0.777 0.725 cellular retinoic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040624-3]
3. hoxd13a ENSDARG00000059256 1190 2.855 - - - - 0.959 0.949 0.947 - - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
4. zgc:92061 zgc:92061 21304 2.791 - 0.950 - 0.967 0.874 - - - -
5. and1 ENSDARG00000088514 37603 2.662 - - 0.893 0.843 0.926 - - - - actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
6. BX511121.1 ENSDARG00000029997 1774 2.608 - - - 0.940 0.948 - - 0.720 -
7. hoxa13a ENSDARG00000100312 543 2.576 - - - 0.938 0.898 - - - 0.740 homeobox A13a [Source:ZFIN;Acc:ZDB-GENE-990415-5]
8. cdkl1 ENSDARG00000017329 3345 2.475 - - - 0.868 0.782 - - - 0.825 cyclin-dependent kinase-like 1 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-040808-34]
9. efemp2a ENSDARG00000094324 39261 2.408 - 0.863 - 0.709 - - - 0.836 - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
10. krt18 ENSDARG00000018404, ENSDARG00000109528 43707 2.221 - 0.754 - 0.714 - - - 0.753 - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
11. CABZ01074130.1 ENSDARG00000105274 26501 1.88 - - - 0.957 0.923 - - - -
12. si:dkey-5n7.2 ENSDARG00000102339 42 1.868 - - - - - 0.969 0.899 - - si:dkey-5n7.2 [Source:ZFIN;Acc:ZDB-GENE-050420-254]
13. ntd5 ENSDARG00000040944 4988 1.867 - - - 0.936 0.931 - - - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
14. emilin3a ENSDARG00000078052 1652 1.844 - - 0.970 0.874 - - - - - elastin microfibril interfacer 3a [Source:ZFIN;Acc:ZDB-GENE-080612-2]
15. si:dkey-153n9.5 si:dkey-153n9.5 20 1.841 - - - - - 0.931 0.910 - -
16. chmp4b chmp4b 5318 1.833 - 0.986 0.847 - - - - - -
17. hoxc13b ENSDARG00000113877 549 1.831 - - - 0.885 0.946 - - - - homeobox C13b [Source:ZFIN;Acc:ZDB-GENE-000822-5]
18. si:dkey-3d18.4 si:dkey-3d18.4 43 1.821 - - - - - 0.910 0.911 - -
19. tsn ENSDARG00000041830, ENSDARG00000111147 1268 1.803 - 0.999 - - - 0.804 - - - translin [Source:ZFIN;Acc:ZDB-GENE-030131-6039]
20. frem2a ENSDARG00000076856 11022 1.798 - - - 0.867 0.931 - - - - Fras1 related extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-081119-3]
21. sp5l ENSDARG00000115868 361 1.787 - - - 0.845 0.942 - - - - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
22. insl5a ENSDARG00000070966, ENSDARG00000112563 45 1.786 - - - - - 0.931 0.855 - - insulin-like 5a [Source:ZFIN;Acc:ZDB-GENE-050310-4]
23. taf1b ENSDARG00000028937 879 1.785 - - 0.908 - - 0.877 - - - TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B [Source:ZFIN;Acc:ZDB-GENE-041008-2]
24. wu:fb17f05 wu:fb17f05 13622 1.782 - - - 0.957 0.825 - - - -
25. dhcr24 ENSDARG00000013236 61 1.729 - - - 0.776 - 0.953 - - - 24-dehydrocholesterol reductase [Source:ZFIN;Acc:ZDB-GENE-041212-73]
26. si:ch1073-263o8.2 ENSDARG00000090870 66 1.725 - - - 0.794 - 0.931 - - - si:ch1073-263o8.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5362]
27. pc pc 116 1.716 - - - - - 0.802 0.914 - -
28. edem2 ENSDARG00000028448 236 1.712 - - - - - 0.865 0.847 - - ER degradation enhancer, mannosidase alpha-like 2 [Source:ZFIN;Acc:ZDB-GENE-060519-1]
29. poc1b ENSDARG00000021110, ENSDARG00000116944 254 1.709 - - - - - 0.821 0.888 - - POC1 centriolar protein B [Source:ZFIN;Acc:ZDB-GENE-031118-54]
30. hoxc12b ENSDARG00000103133 1290 1.707 - 1.000 - - 0.707 - - - - homeobox C12b [Source:ZFIN;Acc:ZDB-GENE-000329-17]
31. ttll9 ENSDARG00000062806 89 1.693 - - - 0.794 - - 0.899 - - tubulin tyrosine ligase-like family, member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1582]
32. abcb11a ENSDARG00000011573 190 1.688 - - - 0.790 - - 0.898 - - ATP-binding cassette, sub-family B (MDR/TAP), member 11a [Source:ZFIN;Acc:ZDB-GENE-050517-13]
33. NDNF ENSDARG00000062936 7287 1.686 - - 0.931 0.755 - - - - - neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
34. rxrab ENSDARG00000035127 231 1.68 - - - - 0.864 0.816 - - - retinoid x receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-243]
35. rhbdd1 ENSDARG00000021046 120 1.674 - - - 0.815 - 0.859 - - - rhomboid domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-85]
36. eve1 ENSDARG00000056012 144 1.657 - - - 0.854 0.803 - - - - even-skipped-like1 [Source:ZFIN;Acc:ZDB-GENE-980526-69]
37. vav3a ENSDARG00000086623 498 1.65 - - - - - 0.922 0.728 - - vav 3 guanine nucleotide exchange factor a [Source:ZFIN;Acc:ZDB-GENE-091204-266]
38. gdf10b ENSDARG00000073891 116 1.644 - - - 0.865 0.779 - - - - growth differentiation factor 10b [Source:ZFIN;Acc:ZDB-GENE-120316-1]
39. drd4a ENSDARG00000038363 82 1.642 - - - 0.773 - 0.869 - - - dopamine receptor D4a [Source:ZFIN;Acc:ZDB-GENE-070112-996]
40. kazald2 ENSDARG00000078518 3062 1.618 - - - - 0.841 - - - 0.777 Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
41. foxj1a ENSDARG00000101919 1095 1.614 - - - 0.864 0.750 - - - - forkhead box J1a [Source:ZFIN;Acc:ZDB-GENE-060929-1178]
42. cpa6 ENSDARG00000012013 73 1.612 - - - - 0.737 0.875 - - - carboxypeptidase A6 [Source:ZFIN;Acc:ZDB-GENE-091204-331]
43. EMILIN3 1347 1.611 - - - 0.869 0.742 - - - - elastin microfibril interfacer 3
44. numb ENSDARG00000027279 2905 1.608 - - 0.904 0.704 - - - - - numb homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060422-1]
45. ostf1_1 ENSDARG00000091555, ENSDARG00000114550 75 1.606 - - - 0.836 - - 0.770 - - osteoclast stimulating factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-157]
46. ENSDARG00000088164 ENSDARG00000088164 59 1.602 - - - 0.865 - - 0.737 - -
47. tnfrsf1b ENSDARG00000070165 467 1.597 - - - 0.742 - 0.855 - - - tumor necrosis factor receptor superfamily, member 1B [Source:ZFIN;Acc:ZDB-GENE-070410-133]
48. hoxa13b ENSDARG00000036254 404 1.597 - - - - 0.871 - - - 0.726 homeobox A13b [Source:ZFIN;Acc:ZDB-GENE-980526-365]
49. hoxc12a ENSDARG00000070352 7409 1.595 - - - - 0.836 - - 0.759 - homeobox C12a [Source:ZFIN;Acc:ZDB-GENE-000822-6]
50. si:dkey-183n20.15 ENSDARG00000094265 190 1.589 - - - - - 0.722 0.867 - - si:dkey-183n20.15 [Source:ZFIN;Acc:ZDB-GENE-041001-160]
51. spon2b ENSDARG00000002732 115 1.578 - - - 0.758 - - - - 0.820 spondin 2b, extracellular matrix protein [Source:ZFIN;Acc:ZDB-GENE-990415-161]
52. ccdc113 ENSDARG00000006981 67 1.577 - - - 0.843 0.734 - - - - coiled-coil domain containing 113 [Source:ZFIN;Acc:ZDB-GENE-041010-163]
53. wbp11 ENSDARG00000099151, ENSDARG00000101411 567 1.575 - - - - - 0.858 0.717 - - WW domain binding protein 11 [Source:ZFIN;Acc:ZDB-GENE-040426-1829]
54. ppp1r12c ENSDARG00000052423 183 1.572 - - - - - 0.785 0.787 - - protein phosphatase 1, regulatory subunit 12C [Source:ZFIN;Acc:ZDB-GENE-010724-11]
55. serpinh1b ENSDARG00000019949 11693 1.572 - - 0.836 0.736 - - - - - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b [Source:ZFIN;Acc:ZDB-GENE-990415-93]
56. ccdc151 ENSDARG00000062978, ENSDARG00000113033 316 1.55 - - - 0.848 0.702 - - - - coiled-coil domain containing 151 [Source:ZFIN;Acc:ZDB-GENE-061013-787]
57. depdc7 232 1.55 - - - - - 0.718 0.832 - - DEP domain containing 7, transcript variant X1
58. zgc:193711 ENSDARG00000101901 503 1.542 - - - 0.748 - 0.794 - - - zgc:193711 [Source:ZFIN;Acc:ZDB-GENE-081022-34]
59. ampd3b ENSDARG00000032469, ENSDARG00000117191 350 1.539 - - - 0.706 - 0.833 - - - adenosine monophosphate deaminase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5929]
60. angptl6 ENSDARG00000020265 273 1.502 - - - 0.766 0.736 - - - - angiopoietin-like 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9735]
61. bcam ENSDARG00000090190 39912 1.49 - - - 0.734 0.756 - - - - basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
62. pkp2 ENSDARG00000023026 120 1.488 - - - - 0.711 - 0.777 - - plakophilin 2 [Source:ZFIN;Acc:ZDB-GENE-041210-167]
63. efemp2b ENSDARG00000020811 116 1.486 - - - 0.749 0.737 - - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
64. gorab ENSDARG00000042031 483 1.482 - - - 0.767 - 0.715 - - - golgin, rab6-interacting [Source:ZFIN;Acc:ZDB-GENE-040426-1384]
65. spred2b ENSDARG00000008372 405 1.461 - - - 0.747 0.714 - - - - sprouty-related, EVH1 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2342]
66. golt1ba ENSDARG00000022795 121 1.458 - - - 0.728 - - 0.730 - - golgi transport 1Ba [Source:ZFIN;Acc:ZDB-GENE-041210-157]
67. fam177a1 ENSDARG00000079636 2391 1 - 1.000 - - - - - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
68. id4 ENSDARG00000045131 2916 1 - 1.000 - - - - - - - inhibitor of DNA binding 4 [Source:ZFIN;Acc:ZDB-GENE-051113-208]
69. smg8 ENSDARG00000061378 1164 1 - 1.000 - - - - - - - SMG8 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-091204-279]
70. si:dkey-117m1.4 ENSDARG00000093120 1666 1 - 1.000 - - - - - - - si:dkey-117m1.4 [Source:ZFIN;Acc:ZDB-GENE-090313-177]
71. nfyba ENSDARG00000039185 1804 1 - 1.000 - - - - - - - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
72. ptpreb ENSDARG00000021151 739 1 - 1.000 - - - - - - - protein tyrosine phosphatase, receptor type, E, b [Source:ZFIN;Acc:ZDB-GENE-060503-263]
73. qdpra ENSDARG00000040190 4064 1 - 1.000 - - - - - - - quinoid dihydropteridine reductase a [Source:ZFIN;Acc:ZDB-GENE-070705-197]
74. fynb ENSDARG00000025319 1175 1 - 1.000 - - - - - - - FYN proto-oncogene, Src family tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-050706-89]
75. pwp1 ENSDARG00000015921 1160 1 - 1.000 - - - - - - - PWP1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1049]
76. PITPNC1 ENSDARG00000099260 1096 1 - 1.000 - - - - - - - phosphatidylinositol transfer protein cytoplasmic 1 [Source:HGNC Symbol;Acc:HGNC:21045]
77. slc25a36b ENSDARG00000015915 1750 1 - 1.000 - - - - - - - solute carrier family 25 (pyrimidine nucleotide carrier ), member 36b [Source:ZFIN;Acc:ZDB-GENE-080219-28]
78. BX005368.2 BX005368.2 702 1 - 1.000 - - - - - - -
79. itpkcb ENSDARG00000067741 2370 1 - 1.000 - - - - - - - inositol-trisphosphate 3-kinase Cb [Source:ZFIN;Acc:ZDB-GENE-080225-27]
80. fgfrl1a ENSDARG00000032617 1546 1 - 1.000 - - - - - - - fibroblast growth factor receptor like 1a [Source:ZFIN;Acc:ZDB-GENE-040128-2]
81. pdgfrl ENSDARG00000006456, ENSDARG00000116983 1020 1 - 1.000 - - - - - - - platelet-derived growth factor receptor-like [Source:ZFIN;Acc:ZDB-GENE-040426-901]
82. zcchc14 ENSDARG00000101242 630 1 - 1.000 - - - - - - - zinc finger, CCHC domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-060503-319]
83. ADAMTS17 ENSDARG00000075555 887 1 - 1.000 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 17 [Source:ZFIN;Acc:ZDB-GENE-121030-7]
84. larp7 ENSDARG00000017315 1194 1 - 1.000 - - - - - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
85. abhd17b ENSDARG00000035571 745 1 - 1.000 - - - - - - - abhydrolase domain containing 17B [Source:ZFIN;Acc:ZDB-GENE-040718-244]
86. rtn3 ENSDARG00000091348 2070 1 - 1.000 - - - - - - - reticulon 3 [Source:ZFIN;Acc:ZDB-GENE-030710-5]
87. pon1 ENSDARG00000032496 1375 0.999 - 0.999 - - - - - - - paraoxonase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-6]
88. ak4 ENSDARG00000006546 1528 0.999 - 0.999 - - - - - - - adenylate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2505]
89. mrpl11 ENSDARG00000013075 2927 0.999 - 0.999 - - - - - - - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
90. dctn2 ENSDARG00000031388 3825 0.999 - 0.999 - - - - - - - dynactin 2 (p50) [Source:ZFIN;Acc:ZDB-GENE-040426-1279]
91. pgm5 ENSDARG00000060745, ENSDARG00000114684 1083 0.999 - 0.999 - - - - - - - phosphoglucomutase 5 [Source:ZFIN;Acc:ZDB-GENE-060503-838]
92. plod1a ENSDARG00000059746 3364 0.999 - 0.999 - - - - - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3165]
93. tyms ENSDARG00000042894 3068 0.999 - 0.999 - - - - - - - thymidylate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-59]
94. si:dkeyp-44a8.2 ENSDARG00000092493 8308 0.999 - 0.999 - - - - - - - si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
95. RBM33 RBM33 1954 0.999 - 0.999 - - - - - - -
96. abhd10b 2128 0.998 - 0.998 - - - - - - - abhydrolase domain containing 10b
97. ube2i2 ube2i2 4828 0.998 - 0.998 - - - - - - -
98. pkmb ENSDARG00000099860 25094 0.998 - 0.998 - - - - - - - pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
99. usp7 ENSDARG00000073710 7017 0.998 - 0.998 - - - - - - - ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
100. fras1 ENSDARG00000054619, ENSDARG00000114204 4459 0.998 - 0.998 - - - - - - - Fraser extracellular matrix complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060526-68]

There are 1202 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA