Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hoxc11b

Gene Name Gene ID Reads Annotation
hoxc11b ENSDARG00000102631 808 homeobox C11b [Source:ZFIN;Acc:ZDB-GENE-000822-3]










Genes with expression patterns similar to hoxc11b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hoxc11b ENSDARG00000102631 808 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 homeobox C11b [Source:ZFIN;Acc:ZDB-GENE-000822-3]
2. BX119916.1 BX119916.1 19 1.849 0.953 0.896 - - - - - - -
3. plcd3b ENSDARG00000079572 64 1.823 0.953 - - - - 0.870 - - - phospholipase C, delta 3b [Source:ZFIN;Acc:ZDB-GENE-081222-2]
4. CR735107.2 CR735107.2 476 1.821 - - - - - 0.870 - - 0.951
5. rnf213b ENSDARG00000103551 63 1.821 0.953 - - - - 0.868 - - - ring finger protein 213b [Source:ZFIN;Acc:ZDB-GENE-110822-1]
6. C3 C3 46 1.798 0.953 0.845 - - - - - - -
7. ctssb.2 ctssb.2 122 1.784 0.953 0.831 - - - - - - -
8. dennd2db ENSDARG00000030250 24 1.774 0.953 - - - - 0.821 - - - DENN/MADD domain containing 2Db [Source:ZFIN;Acc:ZDB-GENE-041114-34]
9. GTSF1L GTSF1L 2089 1.74 - - - - - 0.779 - - 0.961
10. CABZ01112215.1 CABZ01112215.1 23 1.719 0.953 - - - - - 0.766 - -
11. tagapa ENSDARG00000002353 20 1.711 - 0.930 0.781 - - - - - - T cell activation RhoGTPase activating protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1877]
12. kdelr3 ENSDARG00000040912 556 1.709 - - - - - 0.740 - - 0.969 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1387]
13. cpne3 ENSDARG00000104177, ENSDARG00000109906, ENSDARG00000110868 1084 1.704 - - - - - 0.734 - - 0.970 copine III [Source:ZFIN;Acc:ZDB-GENE-040426-763]
14. ca15b ENSDARG00000040510 5 1.695 0.953 - - - - - 0.742 - - carbonic anhydrase XVb [Source:ZFIN;Acc:ZDB-GENE-040426-2222]
15. si:dkey-219c3.2 ENSDARG00000075805 619 1.689 0.726 - - - - - - - 0.963 si:dkey-219c3.2 [Source:ZFIN;Acc:ZDB-GENE-090313-238]
16. actr10 ENSDARG00000038432 1598 1.678 - 0.723 - - - - - - 0.955 ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
17. znf185 ENSDARG00000103917 7195 1.675 - - - 0.769 - - - - 0.906 zinc finger protein 185 with LIM domain [Source:ZFIN;Acc:ZDB-GENE-061103-355]
18. zgc:91985 zgc:91985 1517 1.67 - 0.708 - - - - - - 0.962
19. si:ch211-173n18.4 129 1.662 0.953 0.709 - - - - - - - si:ch211-173n18.4, transcript variant X1
20. socs9 ENSDARG00000101985 44 1.661 0.953 - - - - - 0.708 - - suppressor of cytokine signaling 9 [Source:ZFIN;Acc:ZDB-GENE-030131-4065]
21. BX004873.3 BX004873.3 59 1.654 0.953 0.701 - - - - - - -
22. fam84b ENSDARG00000032859, ENSDARG00000116831 386 1.652 0.843 0.809 - - - - - - - family with sequence similarity 84, member B [Source:ZFIN;Acc:ZDB-GENE-060929-1130]
23. zgc:194930 ENSDARG00000079584 326 1.624 - 0.884 - - - - 0.740 - - zgc:194930 [Source:ZFIN;Acc:ZDB-GENE-081022-166]
24. WNT7A WNT7A 320 1.622 - - - - - 0.917 0.705 - -
25. CALN1 ENSDARG00000088898 114 1.62 0.818 0.802 - - - - - - - calneuron 1 [Source:ZFIN;Acc:ZDB-GENE-130313-1]
26. C17H15orf41 C17H15orf41 313 1.62 - - - - - 0.918 0.702 - -
27. spef2 ENSDARG00000098330 59 1.613 0.905 - - - - - 0.708 - - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
28. CABZ01071911.2 CABZ01071911.2 64 1.601 0.835 - - - - - 0.766 - -
29. STAC ENSDARG00000074004 83 1.593 0.783 - - - - 0.810 - - - SH3 and cysteine rich domain [Source:ZFIN;Acc:ZDB-GENE-131121-459]
30. si:dkey-3d4.1 si:dkey-3d4.1 37 1.589 - - - - - 0.869 0.720 - -
31. SETDB2 ENSDARG00000101462 249 1.588 0.857 - - - - 0.731 - - - SET domain, bifurcated 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7093]
32. lzts2a ENSDARG00000074597, ENSDARG00000113794 7477 1.587 - - - - - 0.711 - - 0.876 leucine zipper, putative tumor suppressor 2a [Source:ZFIN;Acc:ZDB-GENE-090313-276]
33. CR788316.4 ENSDARG00000105829 297 1.584 - 0.840 - - - - 0.744 - - neoverrucotoxin subunit beta-like [Source:NCBI gene;Acc:100004951]
34. si:ch211-103e16.4 si:ch211-103e16.4 227 1.584 0.818 - - - - 0.766 - - -
35. rrbp1b ENSDARG00000041703, ENSDARG00000115474 4598 1.576 - - - - - 0.702 - - 0.874 ribosome binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030429-36]
36. ints12 ENSDARG00000091678 3261 1.567 0.816 0.751 - - - - - - - integrator complex subunit 12 [Source:ZFIN;Acc:ZDB-GENE-040625-178]
37. CT573476.1 CT573476.1 74 1.566 - 0.701 - - - 0.865 - - -
38. CR774186.1 CR774186.1 92 1.565 - - - - - 0.862 0.703 - -
39. si:dkey-1f1.4 si:dkey-1f1.4 105 1.557 - - - - - 0.821 0.736 - -
40. sun1 ENSDARG00000055350 3622 1.538 - - - 0.716 - - - - 0.822 Sad1 and UNC84 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-551]
41. dcbld1 ENSDARG00000015907 36 1.505 0.739 - - - - - 0.766 - - discoidin, CUB and LCCL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050913-77]
42. trim2a ENSDARG00000031817 224 1.501 0.764 0.737 - - - - - - - tripartite motif containing 2a [Source:ZFIN;Acc:ZDB-GENE-050327-99]
43. etv4 ENSDARG00000018303, ENSDARG00000115855 3889 1.501 - - - - - 0.720 - - 0.781 ets variant 4 [Source:ZFIN;Acc:ZDB-GENE-990415-71]
44. serpine3 ENSDARG00000057108 49 1.5 - - 0.738 - - - 0.762 - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
45. vtg7 ENSDARG00000092419, ENSDARG00000112466, ENSDARG00000113334 48 1.496 - 0.788 - - - - 0.708 - - vitellogenin 7 [Source:ZFIN;Acc:ZDB-GENE-001201-6]
46. sfi1 ENSDARG00000053992 1075 1.494 - - - - - 0.793 0.701 - - SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
47. fuca2 ENSDARG00000044073, ENSDARG00000115098 1199 1.488 - 0.734 - - - 0.754 - - - alpha-L-fucosidase 2 [Source:ZFIN;Acc:ZDB-GENE-040822-39]
48. cldn11a ENSDARG00000020031 284 1.487 - 0.721 - - - - 0.766 - - claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
49. zgc:112496 ENSDARG00000004274 1258 1.484 - - - - - 0.719 - 0.765 - zgc:112496 [Source:ZFIN;Acc:ZDB-GENE-050320-25]
50. rhof ENSDARG00000054389, ENSDARG00000111798 15 1.471 - 0.705 - - - - 0.766 - - ras homolog family member F [Source:ZFIN;Acc:ZDB-GENE-050522-280]
51. ercc5 ENSDARG00000023678 468 1.466 - - - - - 0.737 0.729 - - excision repair cross-complementation group 5 [Source:ZFIN;Acc:ZDB-GENE-050327-28]
52. CCKBR CCKBR 88 1.435 - 0.721 - - - 0.714 - - -
53. samsn1a ENSDARG00000054543 28 1.426 - 0.721 - - - - 0.705 - - SAM domain, SH3 domain and nuclear localisation signals 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8639]
54. lrrc34 ENSDARG00000062235 23 1 1.000 - - - - - - - - leucine rich repeat containing 34 [Source:ZFIN;Acc:ZDB-GENE-091118-73]
55. postna ENSDARG00000043806 143 1 1.000 - - - - - - - - periostin, osteoblast specific factor a [Source:ZFIN;Acc:ZDB-GENE-091113-23]
56. SPAG1 SPAG1 44 0.974 0.974 - - - - - - - -
57. si:busm1-57f23.1 ENSDARG00000074425 418 0.973 - - - - - - - - 0.973 si:busm1-57f23.1 [Source:ZFIN;Acc:ZDB-GENE-030616-512]
58. zdhhc4 ENSDARG00000045159, ENSDARG00000117124 625 0.971 - - - - - - - - 0.971 zinc finger, DHHC-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9031]
59. tmem51a ENSDARG00000068575, ENSDARG00000114656 596 0.971 - - - - - - - - 0.971 transmembrane protein 51a [Source:ZFIN;Acc:ZDB-GENE-061103-481]
60. EHBP1 ENSDARG00000043643 966 0.971 - - - - - - - - 0.971 EH domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-091006-4]
61. slc2a15b ENSDARG00000053269 899 0.97 - - - - - - - - 0.970 solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
62. si:dkey-78p8.2 si:dkey-78p8.2 205 0.97 0.970 - - - - - - - -
63. adamts9 ENSDARG00000077778 419 0.97 - - - - - - - - 0.970 ADAM metallopeptidase with thrombospondin type 1 motif, 9 [Source:ZFIN;Acc:ZDB-GENE-070814-6]
64. nsun4 ENSDARG00000021324 482 0.97 - - - - - - - - 0.970 NOL1/NOP2/Sun domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-041212-77]
65. baiap2a ENSDARG00000062799 231 0.969 - - - - - - - - 0.969 BAI1-associated protein 2a [Source:ZFIN;Acc:ZDB-GENE-060421-2756]
66. tmem176l.4 ENSDARG00000074390 1886 0.969 - - - - - - - - 0.969 transmembrane protein 176l.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3532]
67. mgat3 mgat3 195 0.969 - - - - - - - - 0.969
68. ZNF337_3 ZNF337_3 561 0.969 - - - - - - - - 0.969
69. dpm1 ENSDARG00000057011, ENSDARG00000112573 1089 0.968 - - - - - - - - 0.968 dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-115]
70. hgd ENSDARG00000058005 437 0.968 - - - - - - - - 0.968 homogentisate 1,2-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-020802-5]
71. FP236513.2 FP236513.2 443 0.968 - - - - - - - - 0.968
72. si:dkey-118j18.2 ENSDARG00000096457 5293 0.968 - - - - - - - - 0.968 si:dkey-118j18.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8692]
73. wipi2 ENSDARG00000037871 425 0.967 - - - - - - - - 0.967 WD repeat domain, phosphoinositide interacting 2 [Source:ZFIN;Acc:ZDB-GENE-040718-488]
74. krt1-c5 ENSDARG00000026979 325 0.967 - - - - - - - - 0.967 keratin, type 1, gene c5 [Source:ZFIN;Acc:ZDB-GENE-060316-3]
75. dlat ENSDARG00000015918 657 0.967 - - - - - - - - 0.967 dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex) [Source:ZFIN;Acc:ZDB-GENE-030131-2921]
76. vox ENSDARG00000099761 801 0.967 - - - - - - - - 0.967 ventral homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-1]
77. MICAL2 MICAL2 396 0.967 - - - - - - - - 0.967
78. MAN2B2 ENSDARG00000079463 316 0.967 - - - - - - - - 0.967 mannosidase, alpha, class 2B, member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-166]
79. arhgef25b ENSDARG00000014465 669 0.967 - - - - - - - - 0.967 Rho guanine nucleotide exchange factor (GEF) 25b [Source:ZFIN;Acc:ZDB-GENE-080225-17]
80. foxo1a ENSDARG00000099555 288 0.967 - - - - - - - - 0.967 forkhead box O1 a [Source:ZFIN;Acc:ZDB-GENE-061013-59]
81. abcg4b ENSDARG00000078068 180 0.967 - - - - - - - - 0.967 ATP-binding cassette, sub-family G (WHITE), member 4b [Source:ZFIN;Acc:ZDB-GENE-080215-10]
82. paip1 ENSDARG00000042892 902 0.967 - - - - - - - - 0.967 poly(A) binding protein interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040801-247]
83. dytn ENSDARG00000071025 38 0.966 0.966 - - - - - - - - dystrotelin [Source:ZFIN;Acc:ZDB-GENE-070124-2]
84. IQCG ENSDARG00000068678 77 0.966 0.966 - - - - - - - - IQ motif containing G [Source:ZFIN;Acc:ZDB-GENE-050419-109]
85. sdccag8 ENSDARG00000078947 68 0.966 0.966 - - - - - - - - serologically defined colon cancer antigen 8 [Source:ZFIN;Acc:ZDB-GENE-090313-318]
86. GPR89A ENSDARG00000077983 463 0.966 - - - - - - - - 0.966 G protein-coupled receptor 89A [Source:HGNC Symbol;Acc:HGNC:31984]
87. oxgr1a.1 ENSDARG00000033684 24 0.966 0.966 - - - - - - - - oxoglutarate (alpha-ketoglutarate) receptor 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6734]
88. si:dkey-119m17.2 509 0.966 - - - - - - - - 0.966 si:dkey-119m17.2, transcript variant X2
89. si:dkey-153k10.6 10 0.966 0.966 - - - - - - - - si:dkey-153k10.6, transcript variant X1
90. C10H11orf63 C10H11orf63 65 0.966 0.966 - - - - - - - -
91. tmem251 ENSDARG00000042341 1102 0.966 - - - - - - - - 0.966 transmembrane protein 251 [Source:ZFIN;Acc:ZDB-GENE-041001-121]
92. PLCXD1 ENSDARG00000088798 23 0.966 0.966 - - - - - - - - phosphatidylinositol-specific phospholipase C, X domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-131127-240]
93. zgc:73340 823 0.966 0.966 - - - - - - - - zgc:73340
94. fabp6 ENSDARG00000044566 46 0.966 0.966 - - - - - - - - fatty acid binding protein 6, ileal (gastrotropin) [Source:ZFIN;Acc:ZDB-GENE-040625-49]
95. ttll3 ENSDARG00000053728 7 0.966 0.966 - - - - - - - - tubulin tyrosine ligase-like family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-182]
96. C9H17orf105 C9H17orf105 29 0.966 0.966 - - - - - - - -
97. zgc:173716 9 0.966 0.966 - - - - - - - - zgc:173716
98. itga10 ENSDARG00000002507 158 0.966 0.966 - - - - - - - - integrin, alpha 10 [Source:ZFIN;Acc:ZDB-GENE-100922-54]
99. OLFM4 OLFM4 6 0.966 0.966 - - - - - - - -
100. C5H9orf171 C5H9orf171 34 0.966 0.966 - - - - - - - -

There are 1446 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA