Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hoxb8a

Gene Name Gene ID Reads Annotation
hoxb8a ENSDARG00000056027 6340 homeobox B8a [Source:ZFIN;Acc:ZDB-GENE-990415-108]










Genes with expression patterns similar to hoxb8a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hoxb8a ENSDARG00000056027 6340 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 homeobox B8a [Source:ZFIN;Acc:ZDB-GENE-990415-108]
2. eif3c ENSDARG00000016443 18003 2.687 - 0.734 - - - 0.955 0.998 - - eukaryotic translation initiation factor 3, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-6166]
3. WDR83OS ENSDARG00000025554 7117 2.643 - 0.974 - - - 0.957 - 0.712 - WD repeat domain 83 opposite strand [Source:ZFIN;Acc:ZDB-GENE-040426-1674]
4. lzts2a ENSDARG00000074597, ENSDARG00000113794 7477 1.988 - 0.991 - - - - 0.997 - - leucine zipper, putative tumor suppressor 2a [Source:ZFIN;Acc:ZDB-GENE-090313-276]
5. rnaseka ENSDARG00000069461 10304 1.926 - - - - - 0.930 0.996 - - ribonuclease, RNase K a [Source:ZFIN;Acc:ZDB-GENE-060825-301]
6. tomm20b ENSDARG00000103566 12436 1.921 - - - - - 0.929 0.992 - - translocase of outer mitochondrial membrane 20b [Source:ZFIN;Acc:ZDB-GENE-040718-451]
7. malt1a malt1a 903 1.92 - 0.990 - - - 0.930 - - -
8. ROMO1 ENSDARG00000038076 7999 1.845 - 0.970 - - - - 0.875 - - reactive oxygen species modulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1768]
9. parp1 ENSDARG00000019529 6787 1.831 0.832 - - - - - 0.999 - - poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
10. arhgap1 ENSDARG00000024324 6904 1.829 - 0.985 - - - - - 0.844 - Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]
11. lamc1 ENSDARG00000036279 11025 1.826 - 0.830 - - - - 0.996 - - laminin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-021226-3]
12. khdrbs1a ENSDARG00000052856 53666 1.772 0.800 - - - - - 0.972 - - KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
13. ndufs4 ENSDARG00000052840, ENSDARG00000110036 3441 1.772 - - - - - 0.946 - 0.826 - NADH:ubiquinone oxidoreductase subunit S4 [Source:ZFIN;Acc:ZDB-GENE-050522-421]
14. PCDH9 ENSDARG00000063264 1309 1.76 0.761 - - - - - 0.999 - - protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]
15. cth ENSDARG00000074301 3860 1.758 - - - - - - 0.999 0.759 - cystathionase (cystathionine gamma-lyase) [Source:ZFIN;Acc:ZDB-GENE-030131-774]
16. akap7 ENSDARG00000043843 3596 1.752 - 0.932 - - - - - 0.820 - A kinase (PRKA) anchor protein 7 [Source:ZFIN;Acc:ZDB-GENE-040724-128]
17. tmem63ba ENSDARG00000104559 11859 1.744 - 0.874 - - - 0.870 - - - transmembrane protein 63Ba [Source:ZFIN;Acc:ZDB-GENE-030131-4320]
18. ELOVL4 ELOVL4 3026 1.73 0.764 - - - - 0.966 - - -
19. selt2 12741 1.721 0.734 0.987 - - - - - - - selenoprotein T, 2
20. lima1 lima1 4760 1.71 - 0.990 - - - - - 0.720 -
21. ACVR1B ACVR1B 4824 1.708 - 0.992 - - - - - 0.716 -
22. nqo1 ENSDARG00000010250 6430 1.686 - - - - - 0.735 0.951 - - NAD(P)H dehydrogenase, quinone 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1226]
23. fam46ba 4575 1.661 - - 0.725 - - 0.936 - - - family with sequence similarity 46, member Ba
24. CABZ01072954.1 CABZ01072954.1 2330 1.634 0.766 - - - - - - 0.868 -
25. ccng1 ENSDARG00000076667, ENSDARG00000110260 40792 1.607 - - - - - 0.710 0.897 - - cyclin G1 [Source:ZFIN;Acc:ZDB-GENE-020322-1]
26. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 1.556 - - - - 0.728 - - - 0.828 homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
27. hoxc6a ENSDARG00000070343 2839 1.549 - - - - 0.719 - - - 0.830 homeobox C6a [Source:ZFIN;Acc:ZDB-GENE-990415-113]
28. mvp ENSDARG00000021242 6875 1.501 - - - - 0.743 - - 0.758 - major vault protein [Source:ZFIN;Acc:ZDB-GENE-030826-33]
29. usp7 ENSDARG00000073710 7017 1.456 0.743 - - - - - - 0.713 - ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
30. si:dkeyp-86f7.3 si:dkeyp-86f7.3 92941 1.441 0.705 - - - - - 0.736 - -
31. lmo4a ENSDARG00000013853, ENSDARG00000111873, ENSDARG00000113473 2584 1.438 - - - - - 0.700 - 0.738 - LIM domain only 4a [Source:ZFIN;Acc:ZDB-GENE-010702-1]
32. ndufa7 ENSDARG00000036684 6051 0.999 - - - - - - 0.999 - - NADH:ubiquinone oxidoreductase subunit A7 [Source:ZFIN;Acc:ZDB-GENE-040801-169]
33. efcab7 ENSDARG00000020279 1030 0.999 - - - - - - 0.999 - - EF-hand calcium binding domain 7 [Source:ZFIN;Acc:ZDB-GENE-040625-115]
34. bin2a ENSDARG00000003219 1369 0.999 - - - - - - 0.999 - - bridging integrator 2a [Source:ZFIN;Acc:ZDB-GENE-041114-126]
35. sec31a ENSDARG00000021082, ENSDARG00000111434, ENSDARG00000114514 6991 0.999 - - - - - - 0.999 - - SEC31 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-020919-2]
36. loxl2a ENSDARG00000044010 1906 0.999 - - - - - - 0.999 - - lysyl oxidase-like 2a [Source:ZFIN;Acc:ZDB-GENE-070818-1]
37. MRPS28 ENSDARG00000041538, ENSDARG00000114420 2014 0.999 - - - - - - 0.999 - - mitochondrial ribosomal protein S28 [Source:ZFIN;Acc:ZDB-GENE-061110-52]
38. dusp4 ENSDARG00000044688, ENSDARG00000112584, ENSDARG00000116379 3232 0.999 - - - - - - 0.999 - - dual specificity phosphatase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-709]
39. TUBGCP6 1991 0.999 - - - - - - 0.999 - - tubulin, gamma complex associated protein 6
40. phf2 ENSDARG00000018691 3341 0.999 - - - - - - 0.999 - - PHD finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-050302-10]
41. chd2 ENSDARG00000060687 3832 0.999 - - - - - - 0.999 - - chromodomain helicase DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-256]
42. vamp3 ENSDARG00000070161 6396 0.999 - - - - - - 0.999 - - vesicle-associated membrane protein 3 (cellubrevin) [Source:ZFIN;Acc:ZDB-GENE-040625-45]
43. cep97 ENSDARG00000102407 1154 0.999 - - - - - - 0.999 - - centrosomal protein 97 [Source:ZFIN;Acc:ZDB-GENE-031030-11]
44. EIF4G1_1 EIF4G1_1 3721 0.999 - - - - - - 0.999 - -
45. stx12 ENSDARG00000098813 2576 0.999 - - - - - - 0.999 - - syntaxin 12 [Source:ZFIN;Acc:ZDB-GENE-040625-11]
46. wu:fj08f03 wu:fj08f03 1337 0.999 - - - - - - 0.999 - -
47. cisd1 ENSDARG00000079516, ENSDARG00000114546 2677 0.999 - - - - - - 0.999 - - CDGSH iron sulfur domain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1162]
48. rgma ENSDARG00000012248 2238 0.999 - - - - - - 0.999 - - repulsive guidance molecule BMP co-receptor a [Source:ZFIN;Acc:ZDB-GENE-040527-1]
49. CT955967.1 ENSDARG00000099956 2885 0.999 - - - - - - 0.999 - -
50. aspg ENSDARG00000052942 1406 0.999 - - - - - - 0.999 - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
51. rbm39a ENSDARG00000011613 4520 0.999 - - - - - - 0.999 - - RNA binding motif protein 39a [Source:ZFIN;Acc:ZDB-GENE-040426-2852]
52. cmip ENSDARG00000062933 4521 0.999 - - - - - - 0.999 - - c-Maf inducing protein [Source:ZFIN;Acc:ZDB-GENE-050419-50]
53. AL772300.3 AL772300.3 1752 0.999 - - - - - - 0.999 - -
54. serpine2 ENSDARG00000029353 2274 0.999 - - - - - - 0.999 - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-848]
55. FP102272.1 FP102272.1 9473 0.998 - - - - - - 0.998 - -
56. loxl1 ENSDARG00000054451 2485 0.998 - - - - - - 0.998 - - lysyl oxidase-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-693]
57. BX548078.1 ENSDARG00000093780 1325 0.998 - - - - - - 0.998 - -
58. rab5aa ENSDARG00000018602 8947 0.998 - - - - - - 0.998 - - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
59. sh3gl3a ENSDARG00000013360 3602 0.998 - - - - - - 0.998 - - SH3-domain GRB2-like 3a [Source:ZFIN;Acc:ZDB-GENE-070112-242]
60. slc16a12b ENSDARG00000089885 3744 0.998 - - - - - - 0.998 - - solute carrier family 16, member 12b [Source:ZFIN;Acc:ZDB-GENE-050522-80]
61. CU463857.1 CU463857.1 5541 0.997 - - - - - - 0.997 - -
62. rab1ba ENSDARG00000058044 5080 0.997 - - - - - - 0.997 - - zRAB1B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-873]
63. cx43.4 ENSDARG00000007099 16369 0.997 - - - - - - 0.997 - - connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
64. zgc:101000 zgc:101000 9041 0.997 - - - - - - 0.997 - -
65. psmd6 ENSDARG00000070674 4675 0.997 - - - - - - 0.997 - - proteasome 26S subunit, non-ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1038]
66. dnajb12b ENSDARG00000087473 3811 0.995 - 0.995 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 12b [Source:ZFIN;Acc:ZDB-GENE-070410-128]
67. txnrd1 11401 0.995 - 0.995 - - - - - - - thioredoxin reductase 1
68. qkia ENSDARG00000097478 18572 0.995 - - - - - - 0.995 - - QKI, KH domain containing, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-990415-230]
69. lgals3l lgals3l 3833 0.994 - - - - - - 0.994 - -
70. ezra ENSDARG00000020944 3105 0.994 - 0.994 - - - - - - - ezrin a [Source:ZFIN;Acc:ZDB-GENE-050522-18]
71. rbx1 ENSDARG00000038030 14611 0.994 - - - - - - 0.994 - - ring-box 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-041008-106]
72. mat2aa ENSDARG00000040334 10769 0.993 - - - - - - 0.993 - - methionine adenosyltransferase II, alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-2049]
73. wasf3 wasf3 3287 0.993 - 0.993 - - - - - - -
74. nr2f1a ENSDARG00000052695 5037 0.993 - - - - - - 0.993 - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
75. hmgcl ENSDARG00000021220 2468 0.993 - - - - - - 0.993 - - 3-hydroxy-3-methylglutaryl-CoA lyase [Source:ZFIN;Acc:ZDB-GENE-040426-958]
76. oaz1a ENSDARG00000071403 21112 0.992 - - - - - - 0.992 - - ornithine decarboxylase antizyme 1a [Source:ZFIN;Acc:ZDB-GENE-020731-4]
77. IDH2 ENSDARG00000003795 18659 0.992 - - - - - - 0.992 - - isocitrate dehydrogenase 2 (NADP+), mitochondrial [Source:ZFIN;Acc:ZDB-GENE-031118-95]
78. PRODH_1 PRODH_1 3400 0.992 - 0.992 - - - - - - -
79. C1H7orf55 C1H7orf55 2552 0.992 - 0.992 - - - - - - -
80. ccne2 ENSDARG00000098529 4695 0.992 - 0.992 - - - - - - - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
81. wdr75 ENSDARG00000040730 1247 0.992 - 0.992 - - - - - - - WD repeat domain 75 [Source:ZFIN;Acc:ZDB-GENE-030616-5]
82. tbl1x ENSDARG00000060438 1386 0.991 - 0.991 - - - - - - - transducin beta like 1 X-linked [Source:ZFIN;Acc:ZDB-GENE-070209-131]
83. PEAK1 ENSDARG00000079756 1330 0.991 - 0.991 - - - - - - - pseudopodium-enriched atypical kinase 1 [Source:ZFIN;Acc:ZDB-GENE-100422-1]
84. cxxc5a ENSDARG00000078865 3447 0.991 - 0.991 - - - - - - - CXXC finger protein 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3178]
85. dnajc18 ENSDARG00000056005 8084 0.991 - 0.991 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-8019]
86. agla ENSDARG00000103811 2856 0.991 - 0.991 - - - - - - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase a [Source:ZFIN;Acc:ZDB-GENE-071004-6]
87. KDM6B KDM6B 10265 0.991 - 0.991 - - - - - - -
88. dynll2a ENSDARG00000069790, ENSDARG00000114539 2328 0.991 - 0.991 - - - - - - - dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:ZDB-GENE-030828-11]
89. slc38a5a ENSDARG00000009901 2527 0.991 - 0.991 - - - - - - - solute carrier family 38, member 5a [Source:ZFIN;Acc:ZDB-GENE-081105-92]
90. sipa1l2 ENSDARG00000061640 4545 0.991 - 0.991 - - - - - - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
91. oxa1l ENSDARG00000069313, ENSDARG00000113799 1687 0.991 - 0.991 - - - - - - - oxidase (cytochrome c) assembly 1-like [Source:ZFIN;Acc:ZDB-GENE-071004-49]
92. CR847934.1 CR847934.1 2658 0.991 - 0.991 - - - - - - -
93. cdk16_1 ENSDARG00000032072 2031 0.991 - 0.991 - - - - - - - cyclin-dependent kinase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-2939]
94. snd1 ENSDARG00000006766 12906 0.991 - - - - - - 0.991 - - staphylococcal nuclease and tudor domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3124]
95. pard6b ENSDARG00000003865 990 0.991 - 0.991 - - - - - - - par-6 partitioning defective 6 homolog beta (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-090312-133]
96. srsf5a ENSDARG00000029818 15600 0.991 - - - - - - 0.991 - - serine/arginine-rich splicing factor 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7336]
97. gpc4 ENSDARG00000015472 2529 0.991 - 0.991 - - - - - - - glypican 4 [Source:ZFIN;Acc:ZDB-GENE-011119-1]
98. si:ch211-114c12.2 ENSDARG00000028542, ENSDARG00000111053 5495 0.991 - 0.991 - - - - - - - si:ch211-114c12.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8522]
99. ythdc1 ENSDARG00000051953, ENSDARG00000114892 4752 0.991 - 0.991 - - - - - - - YTH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-114]
100. polr2d ENSDARG00000076509 3386 0.991 - 0.991 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]

There are 746 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA