Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for hoxb5b

Gene Name Gene ID Reads Annotation
hoxb5b ENSDARG00000054030, ENSDARG00000113174 808 homeobox B5b [Source:ZFIN;Acc:ZDB-GENE-000823-6]










Genes with expression patterns similar to hoxb5b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hoxb5b ENSDARG00000054030, ENSDARG00000113174 808 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 homeobox B5b [Source:ZFIN;Acc:ZDB-GENE-000823-6]
2. gng3 ENSDARG00000009553 2530 2.539 - - - - 0.893 0.940 0.706 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
3. cuedc1a ENSDARG00000068716 232 2.513 0.877 0.732 - - - 0.904 - - - CUE domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061027-344]
4. hoxc4a ENSDARG00000070338 1382 2.384 - - - 0.832 - 0.753 - - 0.799 homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
5. BX323459.1 ENSDARG00000109508 1476 2.316 - 0.720 - - 0.885 - 0.711 - -
6. slc18a3a ENSDARG00000006356 1285 2.297 - - - - 0.853 0.711 0.733 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
7. dpysl3 ENSDARG00000002587 4381 2.295 - 0.728 - - - 0.848 0.719 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
8. celf3a ENSDARG00000034668 2432 2.286 - - - - 0.873 0.709 0.704 - - cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
9. her2 ENSDARG00000038205 3219 2.24 - - - - 0.736 0.753 0.751 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
10. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 1.827 - - - - 0.899 0.928 - - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
11. pafah1b2 ENSDARG00000035352, ENSDARG00000114404 664 1.784 - - - - 0.908 0.876 - - - platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060526-43]
12. rab3aa ENSDARG00000056347, ENSDARG00000114357 160 1.764 - - - - - 0.930 0.834 - - RAB3A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040801-2]
13. LRRC4C ENSDARG00000113411 36 1.756 - - - - - 0.883 0.873 - - leucine rich repeat containing 4C [Source:ZFIN;Acc:ZDB-GENE-050522-533]
14. tspan3b ENSDARG00000053559, ENSDARG00000112641 118 1.754 - - - - - 0.862 0.892 - - tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
15. lgi2a ENSDARG00000111069 965 1.753 - - - - 0.882 0.871 - - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
16. si:ch73-287n15.1 si:ch73-287n15.1 20 1.746 - - - - - 0.873 0.873 - -
17. nacad ENSDARG00000012347 1268 1.745 - - - - - 0.906 0.839 - - NAC alpha domain containing [Source:ZFIN;Acc:ZDB-GENE-091020-7]
18. rbm4.1 ENSDARG00000036386 625 1.744 - 0.928 - - - 0.816 - - - RNA binding motif protein 4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3902]
19. odz4 odz4 822 1.743 - - - - - 0.856 0.887 - -
20. atp6v0a1b ENSDARG00000015174 1052 1.739 - - - - - 0.865 0.874 - - ATPase H+ transporting V0 subunit a1b [Source:ZFIN;Acc:ZDB-GENE-050522-215]
21. CU570681.1 CU570681.1 512 1.735 - 0.838 - - 0.897 - - - -
22. dlg2 ENSDARG00000099323 162 1.734 - - - - 0.910 0.824 - - - discs, large homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050221-3]
23. dpysl5b ENSDARG00000059311 600 1.732 - - - - - 0.895 0.837 - - dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
24. si:ch211-181p13.2 ENSDARG00000096484 94 1.731 - - - - 0.908 0.823 - - - si:ch211-181p13.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9054]
25. prok1 ENSDARG00000073948, ENSDARG00000114411 26 1.726 - - - - - 0.953 0.773 - - prokineticin 1 [Source:ZFIN;Acc:ZDB-GENE-070928-34]
26. syngr3a ENSDARG00000014871 405 1.71 - - - - - 0.873 0.837 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
27. nr2f1b ENSDARG00000017168 1487 1.7 - - - - 0.808 - 0.892 - - nuclear receptor subfamily 2, group F, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1438]
28. si:dkey-28b4.8 ENSDARG00000002840 1277 1.696 - - - - 0.912 0.784 - - - si:dkey-28b4.8 [Source:ZFIN;Acc:ZDB-GENE-090501-2]
29. GRIN2B GRIN2B 140 1.689 - - - - 0.917 - 0.772 - -
30. amer2 ENSDARG00000075222 594 1.685 - - - - 0.920 0.765 - - - APC membrane recruitment protein 2 [Source:ZFIN;Acc:ZDB-GENE-070719-5]
31. rwdd2b ENSDARG00000055426 294 1.685 - 0.779 - - 0.906 - - - - RWD domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041001-119]
32. ANK1_1 ANK1_1 507 1.684 - - - - - 0.810 0.874 - -
33. slc12a5b ENSDARG00000078187 329 1.684 - - - - - 0.927 0.757 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
34. wfs1b ENSDARG00000074617 69 1.679 - - - - - 0.785 0.894 - - Wolfram syndrome 1b (wolframin) [Source:ZFIN;Acc:ZDB-GENE-050809-19]
35. apba1b ENSDARG00000074328 254 1.675 - - - - - 0.788 0.887 - - amyloid beta (A4) precursor protein-binding, family A, member 1b [Source:ZFIN;Acc:ZDB-GENE-070925-3]
36. pyya ENSDARG00000053449 134 1.668 - - 0.744 - - - 0.924 - - peptide YYa [Source:ZFIN;Acc:ZDB-GENE-980526-71]
37. SPTBN4_1 ENSDARG00000092624 473 1.667 - - - - - 0.820 0.847 - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
38. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 1.667 - - - - 0.849 - 0.818 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
39. rusc1 ENSDARG00000078125 617 1.666 - - - - - 0.869 0.797 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
40. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 1.663 - - - - - 0.921 0.742 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
41. gpr56 gpr56 523 1.66 - - - - - 0.934 0.726 - -
42. slc8a2b ENSDARG00000100592 598 1.652 - - - - - 0.921 0.731 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
43. mdm2 ENSDARG00000033443, ENSDARG00000115677 2480 1.647 - - - - 0.913 - - 0.734 - MDM2 oncogene, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-990415-153]
44. bai3 bai3 92 1.645 - - - - - 0.920 0.725 - -
45. tmtc2 tmtc2 798 1.645 - - - - 0.886 - 0.759 - -
46. ctnnd2b ENSDARG00000003779 964 1.642 - - - - - 0.854 0.788 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
47. fbxo41 ENSDARG00000078908 95 1.64 - - - - - 0.883 0.757 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
48. nhlh2 ENSDARG00000025495 1860 1.637 - - - - - 0.915 0.722 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
49. SPOCK1 ENSDARG00000074644 794 1.636 - - - - - 0.893 0.743 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
50. dnajc5aa ENSDARG00000042948 2885 1.635 - - - - - 0.852 0.783 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
51. C8H1orf106 C8H1orf106 2690 1.633 - - - - - 0.855 0.778 - -
52. KEL ENSDARG00000076950 159 1.632 - - - 0.713 0.919 - - - - Kell metallo-endopeptidase (Kell blood group) [Source:ZFIN;Acc:ZDB-GENE-110411-118]
53. negr1 ENSDARG00000021607 1051 1.63 - - - - - 0.824 0.806 - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
54. IGLON5 ENSDARG00000022176 1353 1.627 - - - - - 0.847 0.780 - - IgLON family member 5 [Source:HGNC Symbol;Acc:HGNC:34550]
55. rbfox3 rbfox3 1443 1.625 - - - - - 0.905 0.720 - -
56. clstn1 ENSDARG00000031720 5286 1.623 - - - - - 0.859 0.764 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
57. PRKAR2B ENSDARG00000036446 812 1.622 - - - - - 0.888 0.734 - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
58. fhdc1 ENSDARG00000074812 934 1.621 - - - - 0.864 - 0.757 - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
59. cadpsb ENSDARG00000070567 458 1.62 - - - - - 0.896 0.724 - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
60. AL954372.1_1 ENSDARG00000112499 57 1.618 - - - - - 0.838 0.780 - -
61. CBFA2T3 ENSDARG00000079012 6799 1.617 - - - - - 0.867 0.750 - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
62. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.615 - - - - - 0.822 0.793 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
63. pdzrn4 ENSDARG00000045687 362 1.609 - 0.879 - - - - 0.730 - - PDZ domain containing ring finger 4 [Source:ZFIN;Acc:ZDB-GENE-041210-237]
64. peli2 ENSDARG00000029045 844 1.607 - 0.725 - - 0.882 - - - - pellino E3 ubiquitin protein ligase family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-360]
65. mpp2b ENSDARG00000010957 415 1.605 - 0.819 - - - 0.786 - - - membrane protein, palmitoylated 2b (MAGUK p55 subfamily member 2) [Source:ZFIN;Acc:ZDB-GENE-040704-70]
66. pbx3a ENSDARG00000089262 97 1.604 - - 0.796 - - 0.808 - - - pre-B-cell leukemia homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-031218-1]
67. nell2b ENSDARG00000062797 854 1.604 - - - - - 0.860 0.744 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
68. dnm1b ENSDARG00000009281 219 1.6 0.705 - - - - - 0.895 - - dynamin 1b [Source:ZFIN;Acc:ZDB-GENE-100920-3]
69. tmie ENSDARG00000069423 305 1.599 - - - - - 0.840 0.759 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
70. si:ch211-120j21.1 si:ch211-120j21.1 638 1.599 - - - - 0.888 - 0.711 - -
71. TRIM67 ENSDARG00000108787 290 1.598 - - - - - 0.787 0.811 - - tripartite motif containing 67 [Source:HGNC Symbol;Acc:HGNC:31859]
72. zgc:113263 ENSDARG00000045842 51 1.598 0.813 - - - - 0.785 - - - zgc:113263 [Source:ZFIN;Acc:ZDB-GENE-050306-34]
73. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.597 - - - - 0.805 - 0.792 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
74. rheb ENSDARG00000090213 1432 1.594 - - - - - 0.853 0.741 - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
75. syt12 ENSDARG00000101776 215 1.594 - - - - - 0.848 0.746 - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
76. si:dkey-10f21.4 ENSDARG00000057743 247 1.593 - 0.827 - - - 0.766 - - - si:dkey-10f21.4 [Source:ZFIN;Acc:ZDB-GENE-070912-350]
77. asb2b ENSDARG00000102490 311 1.59 - - - - 0.886 - 0.704 - - ankyrin repeat and SOCS box containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-20]
78. nrn1a ENSDARG00000071860 1311 1.587 - - - - 0.877 - 0.710 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
79. ephb3a ENSDARG00000031548 1872 1.587 - - - - - 0.815 0.772 - - eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]
80. ogfr ENSDARG00000037837 1001 1.586 - - - - 0.871 - 0.715 - - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
81. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.586 - - - - - 0.840 0.746 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
82. magi1a ENSDARG00000070145 547 1.585 - 0.733 - - - 0.852 - - - membrane associated guanylate kinase, WW and PDZ domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-081105-13]
83. KBTBD2 ENSDARG00000087226 707 1.583 - 0.720 - - 0.863 - - - - kelch repeat and BTB (POZ) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1262]
84. prdm8b ENSDARG00000054683, ENSDARG00000112649 270 1.582 - - - - - 0.747 0.835 - - PR domain containing 8b [Source:ZFIN;Acc:ZDB-GENE-060526-174]
85. lzts3b ENSDARG00000058558 166 1.581 - - - - - 0.880 0.701 - - leucine zipper, putative tumor suppressor family member 3b [Source:ZFIN;Acc:ZDB-GENE-110411-249]
86. scn8aa ENSDARG00000005775 792 1.58 - - - - - 0.798 0.782 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
87. phactr3a ENSDARG00000058243 150 1.579 - - - - - 0.871 0.708 - - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
88. adam11 ENSDARG00000079204 298 1.579 - - - - - 0.845 0.734 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
89. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.576 - - - - - 0.865 0.711 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
90. EGR4 ENSDARG00000077799 34 1.576 - - - - - 0.833 0.743 - - early growth response 4 [Source:ZFIN;Acc:ZDB-GENE-080204-90]
91. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 1.576 - - - - - 0.765 0.811 - - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
92. adcyap1b ENSDARG00000027740 1539 1.574 - - - - - 0.754 0.820 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
93. nova2 ENSDARG00000017673 7685 1.571 - - - - - 0.798 0.773 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
94. snap25b ENSDARG00000058117 469 1.571 - - - - - 0.767 0.804 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
95. vim ENSDARG00000010008 3551 1.57 - - - - - 0.724 0.846 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
96. CR847998.1 ENSDARG00000104784 518 1.569 - - - - - 0.843 0.726 - -
97. zgc:153615 ENSDARG00000038981 105 1.566 - - - - - 0.801 0.765 - - zgc:153615 [Source:ZFIN;Acc:ZDB-GENE-061110-79]
98. PRICKLE2 PRICKLE2 69 1.566 0.813 - - - - 0.753 - - -
99. csf1b ENSDARG00000068263 248 1.566 - - - - - 0.739 0.827 - - colony stimulating factor 1b (macrophage) [Source:ZFIN;Acc:ZDB-GENE-061215-106]
100. elavl3 ENSDARG00000014420 8644 1.564 - - - - - 0.840 0.724 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]

There are 1890 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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