Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hoxb5a

Gene Name Gene ID Reads Annotation
hoxb5a ENSDARG00000013057 735 homeobox B5a [Source:ZFIN;Acc:ZDB-GENE-980526-70]










Genes with expression patterns similar to hoxb5a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hoxb5a ENSDARG00000013057 735 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 homeobox B5a [Source:ZFIN;Acc:ZDB-GENE-980526-70]
2. hoxc5a ENSDARG00000070340 436 2.36 - - - - 0.730 - - 0.712 0.918 homeobox C5a [Source:ZFIN;Acc:ZDB-GENE-980526-533]
3. LPHN3 LPHN3 195 1.653 0.789 - - - - 0.864 - - -
4. hoxb6b ENSDARG00000026513, ENSDARG00000111786 544 1.618 - - - - - - - 0.809 0.809 homeobox B6b [Source:ZFIN;Acc:ZDB-GENE-000823-7]
5. fgfr1op2 ENSDARG00000009657 904 1.593 0.751 - - - - 0.842 - - - FGFR1 oncogene partner 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7451]
6. map9 ENSDARG00000037276, ENSDARG00000115648 581 1.545 0.797 - - - - - 0.748 - - microtubule-associated protein 9 [Source:ZFIN;Acc:ZDB-GENE-080225-36]
7. UBL7 UBL7 197 1.544 0.801 - - - - 0.743 - - -
8. hoxc6b ENSDARG00000101954 967 1.529 - - - - - 0.745 0.784 - - homeobox C6b [Source:ZFIN;Acc:ZDB-GENE-000822-1]
9. mmp14a ENSDARG00000002235 911 1.523 0.784 - - - - 0.739 - - - matrix metallopeptidase 14a (membrane-inserted) [Source:ZFIN;Acc:ZDB-GENE-030901-1]
10. qrich1 ENSDARG00000019797, ENSDARG00000111720, ENSDARG00000113429 1177 1.506 - 0.739 - - - 0.767 - - - glutamine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8204]
11. SHISA2 1782 1.497 - - - - - 0.784 0.713 - - shisa family member 2, transcript variant X2
12. PPFIBP1_2 PPFIBP1_2 1274 1.486 - - - - - 0.771 0.715 - -
13. r3hcc1l ENSDARG00000089243 1254 1.477 - 0.700 - - - 0.777 - - - R3H domain and coiled-coil containing 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-4156]
14. pmpca ENSDARG00000102607 1024 1.475 - 0.714 - - - - 0.761 - - peptidase (mitochondrial processing) alpha [Source:ZFIN;Acc:ZDB-GENE-030131-5809]
15. myo1b ENSDARG00000024694 1761 1.472 - - - - - 0.736 0.736 - - myosin IB [Source:ZFIN;Acc:ZDB-GENE-030131-695]
16. sgsh ENSDARG00000032087 294 1.462 0.752 - - - - - 0.710 - - N-sulfoglucosamine sulfohydrolase (sulfamidase) [Source:ZFIN;Acc:ZDB-GENE-030131-4958]
17. alg3 ENSDARG00000053155 1843 1.428 - 0.703 - - - - 0.725 - - asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-050522-334]
18. uqcrc2a ENSDARG00000014794 3949 1.421 - 0.715 - - - - 0.706 - - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
19. rnf113a ENSDARG00000037930 849 1.408 0.707 - - - - 0.701 - - - ring finger protein 113A [Source:ZFIN;Acc:ZDB-GENE-040825-1]
20. hoxb5b ENSDARG00000054030, ENSDARG00000113174 808 0.966 - - - - - - - - 0.966 homeobox B5b [Source:ZFIN;Acc:ZDB-GENE-000823-6]
21. tm4sf4 ENSDARG00000040747 65 0.914 - - - - - - - - 0.914 transmembrane 4 L six family member 4 [Source:ZFIN;Acc:ZDB-GENE-040801-231]
22. si:dkeyp-68b7.10 ENSDARG00000095024 273 0.912 - - - - - 0.912 - - - si:dkeyp-68b7.10 [Source:ZFIN;Acc:ZDB-GENE-070912-667]
23. nfxl1 ENSDARG00000070127 392 0.896 0.896 - - - - - - - - nuclear transcription factor, X-box binding-like 1 [Source:ZFIN;Acc:ZDB-GENE-110411-178]
24. slc6a13l 121 0.893 0.893 - - - - - - - - solute carrier family 6 (neurotransmitter transporter, GABA), member 13 like, transcript variant X2
25. ttyh3b ENSDARG00000007678 537 0.891 - - - - - 0.891 - - - tweety family member 3b [Source:ZFIN;Acc:ZDB-GENE-051120-105]
26. shcbp1 ENSDARG00000102068, ENSDARG00000113939 423 0.886 0.886 - - - - - - - - SHC SH2-domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5865]
27. nxnl2 ENSDARG00000003934 386 0.885 0.885 - - - - - - - - nucleoredoxin like 2 [Source:ZFIN;Acc:ZDB-GENE-041212-55]
28. slc26a11 ENSDARG00000043021 157 0.884 0.884 - - - - - - - - solute carrier family 26 (anion exchanger), member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5349]
29. si:ch211-212k5.1 ENSDARG00000110637 337 0.88 - - - - - 0.880 - - - si:ch211-212k5.1 [Source:ZFIN;Acc:ZDB-GENE-110914-19]
30. LSM5 ENSDARG00000071573 371 0.878 - - - - - 0.878 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
31. myo9b ENSDARG00000077410 1956 0.875 0.875 - - - - - - - - myosin IXb [Source:ZFIN;Acc:ZDB-GENE-030131-938]
32. glb1 ENSDARG00000036415 80 0.873 0.873 - - - - - - - - galactosidase, beta 1 [Source:ZFIN;Acc:ZDB-GENE-050410-9]
33. TMEM132E ENSDARG00000090830 1197 0.873 0.873 - - - - - - - - transmembrane protein 132E [Source:ZFIN;Acc:ZDB-GENE-120926-3]
34. wu:fb15e04 wu:fb15e04 1713 0.87 - - - - - - 0.870 - -
35. nol7 ENSDARG00000075795 1559 0.87 - - - - - - 0.870 - - nucleolar protein 7 [Source:ZFIN;Acc:ZDB-GENE-030131-9100]
36. dnaja3a ENSDARG00000058494, ENSDARG00000111151 2497 0.867 - - - - - - 0.867 - - DnaJ (Hsp40) homolog, subfamily A, member 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7837]
37. dhdhl ENSDARG00000028336 844 0.865 0.865 - - - - - - - - dihydrodiol dehydrogenase (dimeric), like [Source:ZFIN;Acc:ZDB-GENE-040426-2180]
38. uvrag ENSDARG00000023815 424 0.864 - - - - - 0.864 - - - UV radiation resistance associated gene [Source:ZFIN;Acc:ZDB-GENE-040426-924]
39. elk3 ENSDARG00000018688, ENSDARG00000110853 1108 0.863 0.863 - - - - - - - - ELK3, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-2]
40. nkx3-1 ENSDARG00000078280 1205 0.862 - - - - - 0.862 - - - NK3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-081104-238]
41. rprd2a ENSDARG00000058089 743 0.859 0.859 - - - - - - - - regulation of nuclear pre-mRNA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6641]
42. mapre1a ENSDARG00000042927 164 0.859 0.859 - - - - - - - - microtubule-associated protein, RP/EB family, member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6067]
43. hoxa9a ENSDARG00000105013 1509 0.859 - 0.859 - - - - - - - homeobox A9a [Source:ZFIN;Acc:ZDB-GENE-000823-1]
44. zmiz1a ENSDARG00000074502 3920 0.858 - 0.858 - - - - - - - zinc finger, MIZ-type containing 1a [Source:ZFIN;Acc:ZDB-GENE-080220-27]
45. cdc7 ENSDARG00000023584 536 0.855 - - - - - 0.855 - - - cell division cycle 7 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-113]
46. f7 ENSDARG00000034862 405 0.854 0.854 - - - - - - - - coagulation factor VII [Source:ZFIN;Acc:ZDB-GENE-010814-1]
47. MBTD1 ENSDARG00000060868 783 0.854 0.854 - - - - - - - - mbt domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060810-138]
48. hoxc1a ENSDARG00000070337 1460 0.853 - - - - - - - - 0.853 homeobox C1a [Source:ZFIN;Acc:ZDB-GENE-000822-2]
49. hells ENSDARG00000057738, ENSDARG00000112932, ENSDARG00000116012 1443 0.851 - 0.851 - - - - - - - helicase, lymphoid specific [Source:ZFIN;Acc:ZDB-GENE-030131-9923]
50. pigc ENSDARG00000009113 253 0.848 0.848 - - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class C [Source:ZFIN;Acc:ZDB-GENE-030131-2714]
51. uso1 ENSDARG00000019581 479 0.847 0.847 - - - - - - - - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
52. mmp16a 1128 0.845 0.845 - - - - - - - - matrix metallopeptidase 16a (membrane-inserted)
53. itpka ENSDARG00000042856, ENSDARG00000115453 391 0.844 0.844 - - - - - - - - inositol-trisphosphate 3-kinase A [Source:ZFIN;Acc:ZDB-GENE-030616-116]
54. CT955967.1 ENSDARG00000099956 2885 0.844 - 0.844 - - - - - - -
55. C2H1orf35 C2H1orf35 652 0.84 0.840 - - - - - - - -
56. MYADML2 ENSDARG00000053953 810 0.839 - - - - - 0.839 - - - myeloid-associated differentiation marker-like 2 [Source:ZFIN;Acc:ZDB-GENE-120807-3]
57. paxip1 ENSDARG00000005606 1417 0.837 0.837 - - - - - - - - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
58. neil3 ENSDARG00000020079, ENSDARG00000111296 397 0.835 0.835 - - - - - - - - nei-like DNA glycosylase 3 [Source:ZFIN;Acc:ZDB-GENE-041114-18]
59. lap3 ENSDARG00000061981 1188 0.834 - - - - - - 0.834 - - leucine aminopeptidase 3 [Source:ZFIN;Acc:ZDB-GENE-060719-1]
60. pin4 ENSDARG00000004527 3598 0.831 - - - - - - 0.831 - - protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) [Source:ZFIN;Acc:ZDB-GENE-050522-117]
61. rprd1b ENSDARG00000038113 1105 0.831 - - - - - 0.831 - - - regulation of nuclear pre-mRNA domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-030131-355]
62. dohh ENSDARG00000003564, ENSDARG00000116423 1117 0.828 - - - - - - 0.828 - - deoxyhypusine hydroxylase/monooxygenase [Source:ZFIN;Acc:ZDB-GENE-030131-451]
63. C9H2orf47 C9H2orf47 2036 0.826 - - - - - 0.826 - - -
64. BX465851.1 BX465851.1 237 0.826 0.826 - - - - - - - -
65. dnajc10 ENSDARG00000074727 1523 0.825 - - - - - 0.825 - - - DnaJ (Hsp40) homolog, subfamily C, member 10 [Source:ZFIN;Acc:ZDB-GENE-070327-1]
66. si:ch211-113e8.10 ENSDARG00000079631 498 0.825 - - - - - 0.825 - - - si:ch211-113e8.10 [Source:ZFIN;Acc:ZDB-GENE-090313-11]
67. nfe2l1b ENSDARG00000076533, ENSDARG00000114820 1574 0.823 - - - - - 0.823 - - - nuclear factor, erythroid 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]
68. tph1b ENSDARG00000036082, ENSDARG00000112888 79 0.822 0.822 - - - - - - - - tryptophan hydroxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030805-6]
69. USMG5 USMG5 10356 0.821 - - - - - - 0.821 - -
70. fkbp2 ENSDARG00000044540 1615 0.819 - 0.819 - - - - - - - FK506 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-126]
71. sco2 ENSDARG00000045555 219 0.818 - - - - - 0.818 - - - SCO2 cytochrome c oxidase assembly protein [Source:ZFIN;Acc:ZDB-GENE-041210-173]
72. WDR48 WDR48 448 0.818 0.818 - - - - - - - -
73. mrp63 mrp63 2500 0.818 - - - - - - 0.818 - -
74. atxn1b ENSDARG00000060862 345 0.817 - - - - - 0.817 - - - ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
75. sox4b ENSDARG00000098834 1634 0.816 0.816 - - - - - - - - SRY (sex determining region Y)-box 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1274]
76. lemd3 ENSDARG00000015824 2868 0.816 - - - - - - 0.816 - - LEM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-490]
77. C25H11orf24 C25H11orf24 1011 0.815 - - - - - - 0.815 - -
78. ENSDARG00000090150 ENSDARG00000090150 966 0.815 - 0.815 - - - - - - -
79. mfsd10 ENSDARG00000086786 304 0.813 0.813 - - - - - - - - major facilitator superfamily domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050417-154]
80. ggctb ENSDARG00000005085 704 0.812 0.812 - - - - - - - - gamma-glutamylcyclotransferase b [Source:ZFIN;Acc:ZDB-GENE-040426-1939]
81. ppp1r7 ENSDARG00000009740 2606 0.811 - - - - - - 0.811 - - protein phosphatase 1, regulatory (inhibitor) subunit 7 [Source:ZFIN;Acc:ZDB-GENE-051113-288]
82. bach2b ENSDARG00000004074 1079 0.811 - - - - - 0.811 - - - BTB and CNC homology 1, basic leucine zipper transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-041001-139]
83. CR382385.2 ENSDARG00000115992 353 0.811 - - - - - 0.811 - - -
84. si:dkey-238o14.5 si:dkey-238o14.5 450 0.81 0.810 - - - - - - - -
85. si:dkey-156k2.6 si:dkey-156k2.6 848 0.81 - 0.810 - - - - - - -
86. pik3c2b ENSDARG00000086927 864 0.809 0.809 - - - - - - - - phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta [Source:ZFIN;Acc:ZDB-GENE-050309-145]
87. hoxc4a ENSDARG00000070338 1382 0.809 - - - - - - - - 0.809 homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
88. hs3st1l2 ENSDARG00000035578 279 0.808 0.808 - - - - - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2 [Source:ZFIN;Acc:ZDB-GENE-070202-3]
89. rbm42 ENSDARG00000039910 1111 0.807 - 0.807 - - - - - - - RNA binding motif protein 42 [Source:ZFIN;Acc:ZDB-GENE-040809-2]
90. has3 ENSDARG00000057210, ENSDARG00000116537 108 0.807 0.807 - - - - - - - - hyaluronan synthase 3 [Source:ZFIN;Acc:ZDB-GENE-021118-1]
91. lipg ENSDARG00000031044 1516 0.807 - - - - - 0.807 - - - lipase, endothelial [Source:ZFIN;Acc:ZDB-GENE-040426-699]
92. iars2 ENSDARG00000044134 1990 0.806 - - - - - 0.806 - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-608]
93. si:ch73-249k16.1 si:ch73-249k16.1 36 0.806 0.806 - - - - - - - -
94. traf4a ENSDARG00000003963, ENSDARG00000109586 1595 0.805 - - - - - 0.805 - - - tnf receptor-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-040308-1]
95. bmp6 ENSDARG00000015686 211 0.805 0.805 - - - - - - - - bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
96. FOXN2 FOXN2 118 0.804 - - - - - 0.804 - - -
97. tspan5a ENSDARG00000086033 1865 0.804 - - - - - 0.804 - - - tetraspanin 5a [Source:ZFIN;Acc:ZDB-GENE-041010-145]
98. hoxa5a ENSDARG00000102501 1667 0.804 - - - - - - - 0.804 - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
99. CDR2 CDR2 384 0.804 0.804 - - - - - - - -
100. mycbp ENSDARG00000091001 1511 0.803 - - - - - - 0.803 - - c-myc binding protein [Source:ZFIN;Acc:ZDB-GENE-060331-97]

There are 639 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA