Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hoxb13a

Gene Name Gene ID Reads Annotation
hoxb13a ENSDARG00000056015 174 homeobox B13a [Source:ZFIN;Acc:ZDB-GENE-050812-1]










Genes with expression patterns similar to hoxb13a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hoxb13a ENSDARG00000056015 174 4 - - - 1.000 1.000 - - 1.000 1.000 homeobox B13a [Source:ZFIN;Acc:ZDB-GENE-050812-1]
2. eve1 ENSDARG00000056012 144 2.482 - - - - 0.744 - - 0.756 0.982 even-skipped-like1 [Source:ZFIN;Acc:ZDB-GENE-980526-69]
3. C20H6orf165 C20H6orf165 10 1.682 - - - 0.941 0.741 - - - -
4. CABZ01074130.1 ENSDARG00000105274 26501 1.621 - - - - 0.876 - - 0.745 -
5. tmem59 ENSDARG00000019033 2692 1.616 - - - - - - - 0.703 0.913 transmembrane protein 59 [Source:ZFIN;Acc:ZDB-GENE-070912-397]
6. twist3 ENSDARG00000019646 1221 1.613 - - - - - - - 0.765 0.848 twist3 [Source:ZFIN;Acc:ZDB-GENE-000210-7]
7. and1 ENSDARG00000088514 37603 1.539 - - - - 0.814 - - 0.725 - actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
8. morn2 ENSDARG00000071360 44 1.508 - - - 0.802 0.706 - - - - MORN repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-230]
9. SP6 ENSDARG00000099880, ENSDARG00000110548 665 1.421 - - - - 0.720 - - 0.701 - Sp6 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040426-1824]
10. bnip1a ENSDARG00000078259 2 1 - - - 1.000 - - - - - BCL2 interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-081107-44]
11. PDE4B PDE4B 13 1 - - - 1.000 - - - - -
12. Metazoa_SRP_13 Metazoa_SRP_13 7 1 - - - 1.000 - - - - -
13. rprml ENSDARG00000056768 18 1 - - - - 1.000 - - - - reprimo-like [Source:ZFIN;Acc:ZDB-GENE-070615-20]
14. si:ch211-223a21.4 1 1 - - - 1.000 - - - - - si:ch211-223a21.4
15. rhcgb ENSDARG00000100265 4 1 - - - 1.000 - - - - - Rh family, C glycoprotein b [Source:ZFIN;Acc:ZDB-GENE-040426-2595]
16. si:ch211-225h9.2 si:ch211-225h9.2 16 1 - - - 1.000 - - - - -
17. si:ch211-226h7.5 ENSDARG00000074150 1 1 - - - 1.000 - - - - - si:ch211-226h7.5 [Source:ZFIN;Acc:ZDB-GENE-130531-3]
18. CR848763.1 CR848763.1 9 1 - - - 1.000 - - - - -
19. CU855899.1 CU855899.1 2 1 - - - 1.000 - - - - -
20. stpg1 ENSDARG00000103765 19 1 - - - 1.000 - - - - - sperm-tail PG-rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-373]
21. si:dkey-78k11.4 ENSDARG00000094399 13 1 - - - 1.000 - - - - - si:dkey-78k11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-740]
22. col17a1a ENSDARG00000069415 52 1 - - - 1.000 - - - - - collagen, type XVII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090313-107]
23. si:ch211-196c10.11 si:ch211-196c10.11 2 1 - - - 1.000 - - - - -
24. stap2b ENSDARG00000043281 174 1 - - - 1.000 - - - - - signal transducing adaptor family member 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2540]
25. zgc:136872 ENSDARG00000008553 9 1 - - - 1.000 - - - - - zgc:136872 [Source:ZFIN;Acc:ZDB-GENE-060421-5204]
26. DEPDC7 19 0.997 - - - - 0.997 - - - - DEP domain containing 7, transcript variant X1
27. ccdc37 ccdc37 36 0.996 - - - - 0.996 - - - -
28. FAM124B ENSDARG00000087489 16 0.992 - - - 0.992 - - - - - family with sequence similarity 124B [Source:ZFIN;Acc:ZDB-GENE-130327-1]
29. si:ch211-202n12.5 si:ch211-202n12.5 19 0.992 - - - 0.992 - - - - -
30. prlh2 ENSDARG00000071735, ENSDARG00000110890 21 0.99 - - - 0.990 - - - - - prolactin releasing hormone 2 [Source:ZFIN;Acc:ZDB-GENE-091204-205]
31. si:dkey-176f19.7 ENSDARG00000103348 10 0.99 - - - 0.990 - - - - - si:dkey-176f19.7 [Source:ZFIN;Acc:ZDB-GENE-110913-130]
32. si:dkeyp-11g8.3 si:dkeyp-11g8.3 20 0.99 - - - 0.990 - - - - -
33. CABZ01033130.1 CABZ01033130.1 5 0.986 - - - 0.986 - - - - -
34. cdx4 ENSDARG00000036292 1225 0.981 - - - - - - - - 0.981 caudal type homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-980526-330]
35. FUZ ENSDARG00000079730 821 0.976 - - - - - - - - 0.976 fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
36. FP236810.2 ENSDARG00000113218 140 0.976 - - - - - - - - 0.976 UDP-glucuronosyltransferase 2B20-like [Source:NCBI gene;Acc:571561]
37. MYL4 ENSDARG00000011519 309 0.975 - - - - - - - - 0.975 myosin, light chain 4, alkali; atrial, embryonic [Source:ZFIN;Acc:ZDB-GENE-050626-112]
38. TIMP4 TIMP4 599 0.974 - - - - - - - - 0.974
39. gpr1 ENSDARG00000101366 733 0.974 - - - - - - - - 0.974 G protein-coupled receptor 1 [Source:ZFIN;Acc:ZDB-GENE-091204-457]
40. si:ch73-138e16.8 175 0.973 - - - - - - - - 0.973 si:ch73-138e16.8
41. tp53i11b ENSDARG00000006025 569 0.972 - - - - - - - - 0.972 tumor protein p53 inducible protein 11b [Source:ZFIN;Acc:ZDB-GENE-030131-6328]
42. CU896698.1 CU896698.1 4 0.971 - - - 0.971 - - - - -
43. ube2l3b ENSDARG00000027141 26 0.971 - - - - 0.971 - - - - ubiquitin-conjugating enzyme E2L 3b [Source:ZFIN;Acc:ZDB-GENE-030131-662]
44. si:dkey-246e3.4 ENSDARG00000086390 50 0.97 - - - - - - - - 0.970 si:dkey-246e3.4 [Source:ZFIN;Acc:ZDB-GENE-130531-58]
45. si:ch211-89o5.1 si:ch211-89o5.1 91 0.97 - - - - - - - - 0.970
46. ERAP1_1 ERAP1_1 64 0.97 - - - - - - - - 0.970
47. ecd ENSDARG00000022944, ENSDARG00000114710 273 0.97 - - - - - - - - 0.970 ecdysoneless homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6304]
48. si:ch211-232i5.1 ENSDARG00000078072 1337 0.97 - - - - - - - - 0.970 si:ch211-232i5.1 [Source:ZFIN;Acc:ZDB-GENE-070705-127]
49. cd36 ENSDARG00000032639 288 0.97 - - - - - - - - 0.970 CD36 molecule (thrombospondin receptor) [Source:ZFIN;Acc:ZDB-GENE-040718-55]
50. CABZ01039859.1 ENSDARG00000076361 540 0.97 - - - - - - - - 0.970 beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
51. CABZ01063402.1 CABZ01063402.1 64 0.97 - - - - - - - - 0.970
52. CABZ01032467.1 CABZ01032467.1 400 0.97 - - - - - - - - 0.970
53. TPMT TPMT 138 0.969 - - - - - - - - 0.969
54. myo18ab ENSDARG00000061862 124 0.969 - - - - - - - - 0.969 myosin XVIIIAb [Source:ZFIN;Acc:ZDB-GENE-080423-1]
55. CT030712.1 ENSDARG00000044355 83 0.969 - - - - - - - - 0.969 uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
56. PFKL_1 PFKL_1 298 0.969 - - - - - - - - 0.969
57. enpp6 ENSDARG00000040469 187 0.968 - - - - - - - - 0.968 ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:ZFIN;Acc:ZDB-GENE-031205-1]
58. pdlim4 ENSDARG00000068973 2567 0.968 - - - - - - - - 0.968 PDZ and LIM domain 4 [Source:ZFIN;Acc:ZDB-GENE-070308-5]
59. per1b ENSDARG00000012499 320 0.968 - - - - - - - - 0.968 period circadian clock 1b [Source:ZFIN;Acc:ZDB-GENE-040419-1]
60. ACBD3 ENSDARG00000042623 159 0.967 - - - - - - - - 0.967 acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
61. CR388047.3 ENSDARG00000117023 89 0.967 - - - - - - - - 0.967
62. BX004880.1 BX004880.1 638 0.966 - - - - - - - - 0.966
63. cyr61 ENSDARG00000023062 1213 0.966 - - - - - - - - 0.966 cysteine-rich, angiogenic inducer, 61 [Source:ZFIN;Acc:ZDB-GENE-040426-3]
64. MAP1S MAP1S 123 0.966 - - - - - - - - 0.966
65. kti12 ENSDARG00000054301, ENSDARG00000112513, ENSDARG00000114091 382 0.966 - - - - - - - - 0.966 KTI12 chromatin associated homolog [Source:ZFIN;Acc:ZDB-GENE-060825-174]
66. FAM83H FAM83H 190 0.966 - - - - - - - - 0.966
67. casp2 ENSDARG00000062052 559 0.965 - - - - - - - - 0.965 caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
68. erbb3a ENSDARG00000006202 903 0.965 - - - - - - - - 0.965 erb-b2 receptor tyrosine kinase 3a [Source:ZFIN;Acc:ZDB-GENE-030916-3]
69. CCDC167 ENSDARG00000045850 1024 0.965 - - - - - - - - 0.965 coiled-coil domain containing 167 [Source:ZFIN;Acc:ZDB-GENE-041210-79]
70. rnf165a ENSDARG00000077906 133 0.965 - - - - - - - - 0.965 ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
71. prelp ENSDARG00000070597 99 0.965 - - - 0.965 - - - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
72. MIER3 MIER3 114 0.964 - - - - - - - - 0.964
73. calhm2 ENSDARG00000039482 138 0.964 - - - - - - - - 0.964 calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
74. trim33l ENSDARG00000086126 241 0.963 - - - - - - - - 0.963 tripartite motif containing 33, like [Source:ZFIN;Acc:ZDB-GENE-030131-5695]
75. tcea2 ENSDARG00000012927 440 0.963 - - - - - - - - 0.963 transcription elongation factor A (SII), 2 [Source:ZFIN;Acc:ZDB-GENE-040426-985]
76. ptgs1 ENSDARG00000052148 2443 0.962 - - - - - - - - 0.962 prostaglandin-endoperoxide synthase 1 [Source:ZFIN;Acc:ZDB-GENE-020530-1]
77. prmt10 prmt10 312 0.962 - - - - - - - - 0.962
78. si:ch211-195h23.3 ENSDARG00000068431 322 0.962 - - - - - - - - 0.962 si:ch211-195h23.3 [Source:ZFIN;Acc:ZDB-GENE-070912-174]
79. lrp1bb ENSDARG00000061517 172 0.962 - - - - - - - - 0.962 low density lipoprotein receptor-related protein 1Bb [Source:ZFIN;Acc:ZDB-GENE-070912-401]
80. arl6 ENSDARG00000032056, ENSDARG00000113281 238 0.961 - - - - - - - - 0.961 ADP-ribosylation factor-like 6 [Source:ZFIN;Acc:ZDB-GENE-041219-2]
81. tbx6 ENSDARG00000011785 132 0.961 - - - - 0.961 - - - - T-box 6 [Source:ZFIN;Acc:ZDB-GENE-020416-5]
82. zgc:153151 ENSDARG00000069563 126 0.961 - - - - - - - - 0.961 zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
83. glsb ENSDARG00000040705 1439 0.96 - - - - - - - - 0.960 glutaminase b [Source:ZFIN;Acc:ZDB-GENE-030616-550]
84. C25H12orf4 C25H12orf4 317 0.96 - - - - - - - - 0.960
85. nfu1 ENSDARG00000068125 1743 0.96 - - - - - - - - 0.960 NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-365]
86. nrg1 ENSDARG00000104314 1081 0.96 - - - - - - - - 0.960 neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
87. ttc38 ENSDARG00000042188, ENSDARG00000113493 307 0.96 - - - - - - - - 0.960 tetratricopeptide repeat domain 38 [Source:ZFIN;Acc:ZDB-GENE-050522-318]
88. asb13b ENSDARG00000089833 251 0.96 - - - - - - - - 0.960 ankyrin repeat and SOCS box containing 13b [Source:ZFIN;Acc:ZDB-GENE-091118-116]
89. smarcd2 ENSDARG00000088877 416 0.959 - - - - - - - - 0.959 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]
90. prkcbb ENSDARG00000022254 319 0.959 - - - - - - - - 0.959 protein kinase C, beta b [Source:ZFIN;Acc:ZDB-GENE-040426-1178]
91. mto1 ENSDARG00000055679 859 0.959 - - - - - - - - 0.959 mitochondrial tRNA translation optimization 1 [Source:ZFIN;Acc:ZDB-GENE-070209-253]
92. cadpsa ENSDARG00000043661 160 0.958 - - - - - - - - 0.958 Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
93. dnajc12 ENSDARG00000086691 260 0.958 - - - - - - - - 0.958 DnaJ (Hsp40) homolog, subfamily C, member 12 [Source:ZFIN;Acc:ZDB-GENE-070801-3]
94. si:ch211-129c21.1 ENSDARG00000024775 371 0.956 - - - - - - - - 0.956 si:ch211-129c21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5796]
95. trpc4apb ENSDARG00000020647 670 0.956 - - - - - - - - 0.956 transient receptor potential cation channel, subfamily C, member 4 associated protein b [Source:ZFIN;Acc:ZDB-GENE-000330-2]
96. nxnl2 ENSDARG00000003934 386 0.956 - - - - - - - - 0.956 nucleoredoxin like 2 [Source:ZFIN;Acc:ZDB-GENE-041212-55]
97. zgc:174704 10 0.955 - - - 0.955 - - - - - zgc:174704, transcript variant X2
98. nudt15 ENSDARG00000113961 381 0.955 - - - - - - - - 0.955 nudix (nucleoside diphosphate linked moiety X)-type motif 15 [Source:ZFIN;Acc:ZDB-GENE-040625-95]
99. endog ENSDARG00000058865 679 0.955 - - - - - - - - 0.955 endonuclease G [Source:ZFIN;Acc:ZDB-GENE-050522-402]
100. mlx ENSDARG00000037891 433 0.955 - - - - - - - - 0.955 MLX, MAX dimerization protein [Source:ZFIN;Acc:ZDB-GENE-050522-316]

There are 573 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA