Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hoxa9a

Gene Name Gene ID Reads Annotation
hoxa9a ENSDARG00000105013 1509 homeobox A9a [Source:ZFIN;Acc:ZDB-GENE-000823-1]










Genes with expression patterns similar to hoxa9a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hoxa9a ENSDARG00000105013 1509 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 homeobox A9a [Source:ZFIN;Acc:ZDB-GENE-000823-1]
2. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 3.342 - 0.718 0.814 - - 0.948 0.862 - - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
3. add2 ENSDARG00000074581 1402 2.606 - 0.814 - - - 0.895 0.897 - - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
4. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 2.6 - - - - - 0.889 0.802 - 0.909 contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
5. slc1a3a ENSDARG00000104431 9888 2.594 - 0.765 - - - 0.960 0.869 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
6. rgs17 ENSDARG00000039435 590 2.533 0.814 - 0.947 - - - 0.772 - - regulator of G protein signaling 17 [Source:ZFIN;Acc:ZDB-GENE-040718-229]
7. myt1b ENSDARG00000102879 5411 2.529 - 0.735 - - - 0.962 0.832 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
8. hoxa5a ENSDARG00000102501 1667 2.521 - - 0.937 - - 0.884 0.700 - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
9. nrarpb ENSDARG00000018958 6225 2.521 - 0.719 - - - 0.925 0.877 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
10. her4.1 ENSDARG00000056732 1264 2.494 - 0.783 - - - 0.916 0.795 - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
11. gpr144 gpr144 479 2.492 - - 0.942 - - 0.725 0.825 - -
12. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 2.465 0.738 - - - - 0.928 0.799 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
13. dpysl3 ENSDARG00000002587 4381 2.459 - - 0.721 - - 0.900 0.838 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
14. hmgb1b ENSDARG00000030479 10398 2.457 0.710 - - - - 0.908 0.839 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
15. b4galt6 ENSDARG00000010301 2005 2.456 0.777 - 0.846 - - 0.833 - - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-789]
16. layna ENSDARG00000035169 515 2.448 - - 0.947 - - 0.730 0.771 - - layilin a [Source:ZFIN;Acc:ZDB-GENE-070705-452]
17. zeb1b ENSDARG00000013207, ENSDARG00000113922 2571 2.428 - 0.705 0.925 - - 0.798 - - - zinc finger E-box binding homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010621-1]
18. CABZ01111990.1 CABZ01111990.1 4374 2.423 - 0.785 - - - 0.765 0.873 - -
19. AGO1 ENSDARG00000092644 4521 2.399 - 0.701 - - - 0.864 0.834 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
20. sppl2 ENSDARG00000030448 1040 2.397 0.777 - - - - 0.716 - - 0.904 signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
21. CR388002.1 CR388002.1 1998 2.392 - 0.734 - - - 0.795 0.863 - -
22. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 2.377 - - 0.917 - - 0.717 0.743 - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
23. snap91 ENSDARG00000098809 844 2.36 - - - - - 0.782 0.727 - 0.851 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
24. gipc1 ENSDARG00000104483 2913 2.358 - 0.764 - - - 0.890 0.704 - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
25. hdgfrp2 7462 2.336 0.755 0.817 - - - 0.764 - - - hepatoma-derived growth factor-related protein 2, transcript variant X1
26. ccng2 ENSDARG00000017602 3141 2.296 - - 0.800 - - - 0.718 - 0.778 cyclin G2 [Source:ZFIN;Acc:ZDB-GENE-021016-1]
27. rtca ENSDARG00000002215 3558 2.272 - 0.740 - - - 0.761 0.771 - - RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
28. RPH3A RPH3A 309 2.247 0.767 - - - - 0.737 0.743 - -
29. impdh1b ENSDARG00000029524 7472 2.23 - 0.758 - - - 0.771 - - 0.701 IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
30. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 2.227 0.756 0.740 - - - - 0.731 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
31. wu:fb17g07 wu:fb17g07 10567 2.196 - 0.736 - - - 0.759 0.701 - -
32. med25 ENSDARG00000038005, ENSDARG00000115713 1305 2.193 0.743 - - - - 0.746 0.704 - - mediator complex subunit 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2850]
33. actr1 ENSDARG00000011611 3879 2.185 - 0.726 - - - - 0.708 - 0.751 ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
34. mllt11 ENSDARG00000071026 2518 1.875 - - - - - 0.965 0.910 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
35. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.866 - - - - - 0.959 0.907 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
36. TUBA1A ENSDARG00000001889 25294 1.857 - - - - - 0.967 0.890 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
37. pcdh1gc5 ENSDARG00000104826 10052 1.839 - - - - - 0.970 0.869 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
38. zgc:136439 ENSDARG00000009267 720 1.836 - - 0.936 - - - - - 0.900 zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
39. stmn4l ENSDARG00000043932 654 1.83 - - - - - 0.919 - - 0.911 stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
40. gfap ENSDARG00000025301 5584 1.82 - - - - - 0.980 0.840 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
41. PACS1_1 PACS1_1 1264 1.819 - - - - - 0.928 - - 0.891
42. st18 663 1.819 - - - - - 0.950 0.869 - - suppression of tumorigenicity 18, zinc finger
43. plp1a ENSDARG00000103732 3544 1.818 - - - - - 0.936 0.882 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
44. SEMA7A ENSDARG00000078707 465 1.818 - - - - - 0.972 0.846 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
45. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 1.811 - - - - - 0.970 0.841 - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
46. atp6v0cb ENSDARG00000036577 3472 1.81 - - - - - 0.946 0.864 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
47. aldocb ENSDARG00000019702 2111 1.809 - - - - - 0.982 0.827 - - aldolase C, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-030821-1]
48. stxbp1a ENSDARG00000001994 5154 1.808 - - - - - 0.956 0.852 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
49. zgc:194839 ENSDARG00000078550 4003 1.804 - - 0.898 - - - - - 0.906 zgc:194839 [Source:ZFIN;Acc:ZDB-GENE-081022-153]
50. nova2 ENSDARG00000017673 7685 1.804 - - - - - 0.938 0.866 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
51. AKT3 AKT3 1729 1.803 - - - - - 0.967 0.836 - -
52. PVRL4 1691 1.803 - - 0.907 - - - - - 0.896 poliovirus receptor-related 4
53. EFCC1 ENSDARG00000077826 1359 1.801 - - - - - 0.916 0.885 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
54. atp1b4 ENSDARG00000053262 1337 1.801 - - - - - 0.956 0.845 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
55. nmnat2 ENSDARG00000004580 370 1.799 - - - - - 0.954 0.845 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
56. C7H4orf48 C7H4orf48 1455 1.799 - - - - - 0.955 0.844 - -
57. b3gnt2b ENSDARG00000091902 4125 1.797 - - 0.945 - - - - - 0.852 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b [Source:ZFIN;Acc:ZDB-GENE-050913-158]
58. ncana 1537 1.795 - - - - - 0.946 0.849 - - neurocan a
59. eno2 ENSDARG00000014287 2162 1.794 - - - - - 0.919 0.875 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
60. TRAK1 212 1.792 - - 0.968 - - - 0.824 - - trafficking protein, kinesin binding 1, transcript variant X6
61. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.791 - - - - - 0.961 0.830 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
62. hmp19 2554 1.79 - - - - - 0.924 0.866 - - HMP19 protein
63. tfdp2 ENSDARG00000042835 1985 1.789 - - 0.913 - - 0.876 - - - transcription factor Dp-2 [Source:ZFIN;Acc:ZDB-GENE-030219-104]
64. asap2b ENSDARG00000019564 1660 1.788 - - 0.902 - - - - - 0.886 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5060]
65. tuba1c ENSDARG00000055216 8384 1.788 - - - - - 0.965 0.823 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
66. nrn1a ENSDARG00000071860 1311 1.787 - - - - - 0.943 0.844 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
67. sypa ENSDARG00000042974, ENSDARG00000110528 3217 1.785 - - - - - 0.959 0.826 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
68. tmsb ENSDARG00000054911 6411 1.784 - - - - - 0.909 0.875 - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
69. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 1.783 - - - - - 0.922 0.861 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
70. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 1.782 - - - - - 0.952 0.830 - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
71. slc18a3a ENSDARG00000006356 1285 1.78 - - - - - 0.935 0.845 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
72. rab3ab ENSDARG00000043835 1267 1.78 - - - - - 0.960 0.820 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
73. CASK CASK 1750 1.777 - - 0.893 - - 0.884 - - -
74. cers6 ENSDARG00000053583 247 1.776 - - - - - 0.924 0.852 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
75. syt11a ENSDARG00000057913 1145 1.776 - - - - - 0.934 0.842 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
76. rap2ip rap2ip 681 1.776 - - - - - 0.936 0.840 - -
77. gap43 ENSDARG00000099744 4114 1.776 - - - - - 0.952 0.824 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
78. spock2 ENSDARG00000075393 791 1.773 - - - - - 0.943 0.830 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
79. calm1a ENSDARG00000021811 4791 1.772 - - - - - 0.930 0.842 - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
80. adcyap1b ENSDARG00000027740 1539 1.77 - - - - - 0.903 0.867 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
81. si:dkey-25e11.10 si:dkey-25e11.10 955 1.769 - - - - - 0.938 0.831 - -
82. vsnl1b ENSDARG00000044053 1120 1.769 - - - - - 0.938 0.831 - - visinin-like 1b [Source:ZFIN;Acc:ZDB-GENE-080225-39]
83. hmgb3a ENSDARG00000056725 15668 1.768 - - - - - 0.919 0.849 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
84. BX957337.1 BX957337.1 1685 1.768 - - - - - 0.962 0.806 - -
85. IGSF3 ENSDARG00000077002, ENSDARG00000115203 564 1.768 - - 0.954 - - 0.814 - - - immunoglobulin superfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-243]
86. si:ch211-278j3.3 ENSDARG00000020284 478 1.767 - - - - - 0.935 0.832 - - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
87. notch1b ENSDARG00000052094 7874 1.767 - - - - - 0.897 0.870 - - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
88. camta1a ENSDARG00000077428, ENSDARG00000116922 176 1.767 - - - - - 0.917 0.850 - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
89. TUBB8P7_1 TUBB8P7_1 2722 1.767 - - - - - 0.947 0.820 - -
90. ADAM22 ENSDARG00000060532 2259 1.766 - - - - - 0.899 0.867 - - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
91. mapk12b ENSDARG00000006409 2246 1.765 - - - - - 0.919 0.846 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
92. stx1b ENSDARG00000000503 2724 1.765 - - - - - 0.965 0.800 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
93. vim ENSDARG00000010008 3551 1.763 - - - - - 0.921 0.842 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
94. MAP4 MAP4 315 1.763 - - - - - 0.925 0.838 - -
95. si:ch73-21g5.7 ENSDARG00000093156 9412 1.762 - - - - - 0.904 0.858 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
96. slc25a6 ENSDARG00000005853, ENSDARG00000113366 99 1.759 - - - - - 0.929 0.830 - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-446]
97. snap25a ENSDARG00000020609 4537 1.758 - - - - - 0.946 0.812 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
98. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.758 - - - - - 0.942 0.816 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
99. CABZ01088330.1 CABZ01088330.1 679 1.755 - - - - - 0.937 0.818 - -
100. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 1.754 - - - - - 0.915 0.839 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]

There are 2536 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA