Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hoxa4a

Gene Name Gene ID Reads Annotation
hoxa4a 37 homeobox A4a, transcript variant X4










Genes with expression patterns similar to hoxa4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hoxa4a 37 6 - - 1.000 1.000 1.000 1.000 - 1.000 1.000 homeobox A4a, transcript variant X4
2. illr3 ENSDARG00000018327 5 1.964 - - - - - 1.000 - - 0.964 immune-related, lectin-like receptor 3 [Source:ZFIN;Acc:ZDB-GENE-050311-4]
3. FUK ENSDARG00000032650 20 1.866 - - - 0.961 0.905 - - - - fucokinase [Source:ZFIN;Acc:ZDB-GENE-110819-1]
4. AL954698.1 ENSDARG00000098202 377 1.84 - - 0.840 - - 1.000 - - -
5. si:ch73-27j14.2 si:ch73-27j14.2 32 1.79 - - - - - 0.873 - - 0.917
6. BX005410.2 BX005410.2 44 1.78 - - - - - 0.790 - 0.990 -
7. BX537350.1 BX537350.1 8 1.761 - - - 0.761 - 1.000 - - -
8. syce2 ENSDARG00000103187 12 1.74 - - - 0.971 - 0.769 - - - synaptonemal complex central element protein 2 [Source:ZFIN;Acc:ZDB-GENE-050512-1]
9. HIST1H2BA_1 ENSDARG00000116654 37 1.628 - - - - - 0.739 - - 0.889 histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
10. npffr1l3 ENSDARG00000010712 18 1.545 - - - 0.703 - 0.842 - - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
11. CR318593.1_1 CR318593.1_1 8 1 - - - - - 1.000 - - -
12. HABP4 HABP4 33 1 - - - - - 1.000 - - -
13. cyp46a4 cyp46a4 5 1 - - - - - 1.000 - - -
14. ldhbb ENSDARG00000071076 31 1 - - - - - 1.000 - - - lactate dehydrogenase Bb [Source:ZFIN;Acc:ZDB-GENE-040718-176]
15. CR381673.1 ENSDARG00000098337 7 1 - - - 1.000 - - - - -
16. si:ch211-222f23.6 ENSDARG00000042880 3 1 - - - - - 1.000 - - - si:ch211-222f23.6 [Source:ZFIN;Acc:ZDB-GENE-070912-208]
17. raf1a ENSDARG00000096415, ENSDARG00000102328 2 1 - - - - - 1.000 - - - Raf-1 proto-oncogene, serine/threonine kinase a [Source:ZFIN;Acc:ZDB-GENE-990415-41]
18. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 1 - - - - - 1.000 - - - poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
19. dmrt1 ENSDARG00000007349 16 1 - - - - - 1.000 - - - doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
20. pglyrp2 ENSDARG00000062998 11 1 - - - - - 1.000 - - - peptidoglycan recognition protein 2 [Source:ZFIN;Acc:ZDB-GENE-071227-1]
21. zgc:173705 ENSDARG00000105137, ENSDARG00000114437 83 1 - - - - - 1.000 - - - zgc:173705 [Source:ZFIN;Acc:ZDB-GENE-080212-6]
22. F2RL3 ENSDARG00000079399 29 1 - - - - - 1.000 - - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
23. znf512 ENSDARG00000041910 20 1 - - - - - 1.000 - - - zinc finger protein 512 [Source:ZFIN;Acc:ZDB-GENE-041014-346]
24. mfsd6l ENSDARG00000014761 60 1 - - - - - 1.000 - - - major facilitator superfamily domain containing 6-like [Source:ZFIN;Acc:ZDB-GENE-040801-105]
25. ralgapa1 ENSDARG00000076889 36 1 - - - - - 1.000 - - - Ral GTPase activating protein, alpha subunit 1 (catalytic) [Source:ZFIN;Acc:ZDB-GENE-080806-1]
26. FP102786.1 ENSDARG00000090551 3 1 - - - - - 1.000 - - - GTPase IMAP family member 8-like [Source:NCBI gene;Acc:101882698]
27. CABZ01086354.1 CABZ01086354.1 22 1 - - - - - 1.000 - - -
28. dnase1l3l dnase1l3l 16 1 - - - - - 1.000 - - -
29. mcf2b ENSDARG00000056603, ENSDARG00000097371 1 1 - - - - - 1.000 - - - MCF.2 cell line derived transforming sequence b [Source:ZFIN;Acc:ZDB-GENE-091118-4]
30. ZC3H8 ZC3H8 114 1 - - - - - 1.000 - - -
31. fem1a ENSDARG00000067966 11 1 - - - - - 1.000 - - - fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
32. rbck1 ENSDARG00000031954 95 1 - - - - - 1.000 - - - RanBP-type and C3HC4-type zinc finger containing 1 [Source:ZFIN;Acc:ZDB-GENE-040704-3]
33. hlcs ENSDARG00000039934 2 1 - - - - - 1.000 - - - holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) [Source:ZFIN;Acc:ZDB-GENE-030131-5333]
34. BX323882.1 ENSDARG00000101656 2 1 - - - - - 1.000 - - - butyrophilin subfamily 2 member A2-like [Source:NCBI gene;Acc:563995]
35. si:ch211-262i10.3 si:ch211-262i10.3 1 1 - - - - - 1.000 - - -
36. fkbp6 ENSDARG00000030133, ENSDARG00000099077 6 1 - - - - - 1.000 - - - FK506 binding protein 6 [Source:NCBI gene;Acc:402839]
37. ugt5c1 ENSDARG00000061444 6 1 - - - - - 1.000 - - - UDP glucuronosyltransferase 5 family, polypeptide C1 [Source:ZFIN;Acc:ZDB-GENE-050419-68]
38. U6_28 U6_28 1 1 - - - - - 1.000 - - -
39. C12H7orf62 C12H7orf62 2 1 - - - - - 1.000 - - -
40. si:ch211-89o5.1 si:ch211-89o5.1 91 1 - - - - - 1.000 - - -
41. mcm5_1 ENSDARG00000019507 10 1 - - - - - 1.000 - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
42. PCBP3 ENSDARG00000054378 17 1 - - - - - 1.000 - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
43. zgc:153704 ENSDARG00000045979 11 1 - - - - - 1.000 - - - zgc:153704 [Source:ZFIN;Acc:ZDB-GENE-060929-1114]
44. brwd3 ENSDARG00000035540 92 1 - - - - - 1.000 - - - bromodomain and WD repeat domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100921-43]
45. si:dkey-33i11.1 ENSDARG00000053027 2 1 - - - 1.000 - - - - - si:dkey-33i11.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4630]
46. prkacbb ENSDARG00000059125 7 1 - - - - - 1.000 - - - protein kinase, cAMP-dependent, catalytic, beta b [Source:ZFIN;Acc:ZDB-GENE-050904-4]
47. taar20t ENSDARG00000095035 1 1 - - - - - 1.000 - - - trace amine associated receptor 20t [Source:ZFIN;Acc:ZDB-GENE-060414-18]
48. BX571823.1 BX571823.1 2 1 - - - 1.000 - - - - -
49. umodl1 ENSDARG00000068923 2 1 - - - 1.000 - - - - - uromodulin-like 1 [Source:ZFIN;Acc:ZDB-GENE-091204-140]
50. fbxw10 ENSDARG00000086484 11 1 - - - - - 1.000 - - - F-box and WD repeat domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-101021-1]
51. BX682234.1 ENSDARG00000074732 5 1 - - - - - 1.000 - - - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
52. sagb ENSDARG00000038378 28 1 - - - - - 1.000 - - - S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
53. XKR8 XKR8 9 1 - - - 1.000 - - - - -
54. si:ch211-76m11.15 ENSDARG00000098979 6 1 - - - - - 1.000 - - - si:ch211-76m11.15 [Source:ZFIN;Acc:ZDB-GENE-110411-136]
55. EPS15L1 EPS15L1 22 1 - - - - - 1.000 - - -
56. stag1a ENSDARG00000061205 13 1 - - - - - 1.000 - - - stromal antigen 1a [Source:ZFIN;Acc:ZDB-GENE-070912-448]
57. zgc:173837 ENSDARG00000076949 24 1 - - - - - 1.000 - - - zgc:173837 [Source:ZFIN;Acc:ZDB-GENE-080213-12]
58. PEG3_35 PEG3_35 52 1 - - - - - 1.000 - - -
59. tnni1a ENSDARG00000000474 1 1 - - - 1.000 - - - - - troponin I type 1a (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-030616-266]
60. rftn1a ENSDARG00000070831 5 1 - - - - - 1.000 - - - raftlin, lipid raft linker 1a [Source:ZFIN;Acc:ZDB-GENE-060503-293]
61. EXD1 ENSDARG00000098669 27 1 - - - - - 1.000 - - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
62. DRAXIN ENSDARG00000058256, ENSDARG00000111676 152 1 - - - - - 1.000 - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
63. txlng ENSDARG00000001969 7 1 - - - - - 1.000 - - - taxilin gamma [Source:ZFIN;Acc:ZDB-GENE-060616-122]
64. ppid_1 ENSDARG00000038835 4 1 - - - - - 1.000 - - - peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
65. si:dkey-222o15.4 si:dkey-222o15.4 4 1 - - - 1.000 - - - - -
66. VMO1 VMO1 11 1 - - - - - 1.000 - - -
67. echdc1 68 1 - - - - - 1.000 - - - enoyl CoA hydratase domain containing 1, transcript variant 1
68. c1qb ENSDARG00000044612 8 1 - - - 1.000 - - - - - complement component 1, q subcomponent, B chain [Source:ZFIN;Acc:ZDB-GENE-040801-223]
69. f13b ENSDARG00000101353 2 1 - - - - - 1.000 - - - coagulation factor XIII, B polypeptide [Source:ZFIN;Acc:ZDB-GENE-050208-701]
70. cryba2b ENSDARG00000041925 4329 1 - - - - - 1.000 - - - crystallin, beta A2b [Source:ZFIN;Acc:ZDB-GENE-040718-324]
71. FGD5_1 FGD5_1 8 1 - - - - - 1.000 - - -
72. snai3 ENSDARG00000031243 31 1 - - - - - 1.000 - - - snail family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-061013-757]
73. CT027569.1 CT027569.1 5 1 - - - - - 1.000 - - -
74. rgs5b ENSDARG00000017860 55 1 - - - - - 1.000 - - - regulator of G protein signaling 5b [Source:ZFIN;Acc:ZDB-GENE-050417-359]
75. DYNLRB2 DYNLRB2 12 1 - - - - - 1.000 - - -
76. zgc:136902 zgc:136902 4 1 - - - 1.000 - - - - -
77. zgc:114123 ENSDARG00000044956 9 1 - - - - - 1.000 - - - zgc:114123 [Source:ZFIN;Acc:ZDB-GENE-050913-53]
78. CR927050.1 ENSDARG00000099180 5 1 - - - - - 1.000 - - -
79. jak3 ENSDARG00000010252 11 1 - - - - - 1.000 - - - Janus kinase 3 (a protein tyrosine kinase, leukocyte) [Source:ZFIN;Acc:ZDB-GENE-070725-4]
80. CU467888.1 CU467888.1 30 1 - - - 1.000 - - - - -
81. esr2a ENSDARG00000016454 23 1 - - - - - 1.000 - - - estrogen receptor 2a [Source:ZFIN;Acc:ZDB-GENE-030116-2]
82. cyp2aa2 ENSDARG00000104811 77 1 - - - - - 1.000 - - - y cytochrome P450, family 2, subfamily AA, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061027-232]
83. rtn4rl1b ENSDARG00000098528 31 1 - - - - - 1.000 - - - reticulon 4 receptor-like 1b [Source:ZFIN;Acc:ZDB-GENE-040310-3]
84. stk35_1 ENSDARG00000086856 3 1 - - - - - 1.000 - - - serine/threonine kinase 35 [Source:ZFIN;Acc:ZDB-GENE-061103-553]
85. CU929356.4 CU929356.4 86 1 - - - - - 1.000 - - -
86. KBTBD13 ENSDARG00000076449 10 1 - - - 1.000 - - - - - kelch repeat and BTB (POZ) domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-140106-122]
87. asb13a.2 ENSDARG00000045765, ENSDARG00000109879 8 1 - - - - - 1.000 - - - ankyrin repeat and SOCS box containing 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041210-88]
88. GRM8 GRM8 4 1 - - - - - 1.000 - - -
89. CU633857.1 ENSDARG00000115315 21 1 - - - - - 1.000 - - - multiciliate differentiation and DNA synthesis associated cell cycle protein [Source:NCBI gene;Acc:100537904]
90. rac1l_1 ENSDARG00000054649, ENSDARG00000096549 12 1 - - - - - 1.000 - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
91. Metazoa_SRP_15 Metazoa_SRP_15 2 1 - - - - - 1.000 - - -
92. C12H17orf62_1 C12H17orf62_1 83 1 - - - - - 1.000 - - -
93. CABZ01084323.1 ENSDARG00000104937 5 1 - - - 1.000 - - - - - protein tyrosine phosphatase, receptor type D [Source:NCBI gene;Acc:100330629]
94. HIPK1 HIPK1 8 1 - - - - - 1.000 - - -
95. gbp4 ENSDARG00000068857, ENSDARG00000112635 55 1 - - - - - 1.000 - - - guanylate binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-060531-46]
96. sgk494b ENSDARG00000086169 1 1 - - - 1.000 - - - - - uncharacterized serine/threonine-protein kinase SgK494b [Source:ZFIN;Acc:ZDB-GENE-120215-252]
97. irge4 ENSDARG00000070317 1 1 - - - - - 1.000 - - - immunity-related GTPase family, e4 [Source:ZFIN;Acc:ZDB-GENE-051212-2]
98. C8H1orf228 C8H1orf228 72 1 - - - - - 1.000 - - -
99. si:dkeyp-33e11.1 6 1 - - - - - 1.000 - - - si:dkeyp-33e11.1, transcript variant X3
100. si:dkey-188c14.4 si:dkey-188c14.4 5 1 - - - 1.000 - - - - -

There are 712 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA