Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for hoxa1a

Gene Name Gene ID Reads Annotation
hoxa1a ENSDARG00000104307 29 homeobox A1a [Source:ZFIN;Acc:ZDB-GENE-000823-5]










Genes with expression patterns similar to hoxa1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hoxa1a ENSDARG00000104307 29 7 1.000 - 1.000 1.000 1.000 1.000 - 1.000 1.000 homeobox A1a [Source:ZFIN;Acc:ZDB-GENE-000823-5]
2. zgc:174877 ENSDARG00000079278 143 1.825 1.000 - - - - 0.825 - - - zgc:174877 [Source:ZFIN;Acc:ZDB-GENE-041008-66]
3. rap2ab ENSDARG00000040246 63 1.806 1.000 - - - - 0.806 - - - RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116]
4. AL954372.1_1 ENSDARG00000112499 57 1.741 1.000 - - - - 0.741 - - -
5. si:ch211-255i3.4 ENSDARG00000095152 7 1.483 0.746 - - - - - - - 0.737 si:ch211-255i3.4 [Source:ZFIN;Acc:ZDB-GENE-100922-237]
6. si:ch1073-160m15.1 si:ch1073-160m15.1 74 1.471 0.746 - - - - 0.725 - - -
7. prkcha ENSDARG00000018382 43 1 1.000 - - - - - - - - protein kinase C, eta, a [Source:ZFIN;Acc:ZDB-GENE-080402-5]
8. csmd2 ENSDARG00000001559 203 1 - - - - - 1.000 - - - CUB and Sushi multiple domains 2 [Source:ZFIN;Acc:ZDB-GENE-030616-39]
9. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1 1.000 - - - - - - - -
10. BX511189.1 BX511189.1 34 1 1.000 - - - - - - - -
11. ANKRD34A 22 1 1.000 - - - - - - - - ankyrin repeat domain 34A, transcript variant X2
12. CU929328.1 ENSDARG00000105332 31 1 1.000 - - - - - - - -
13. RFFL ENSDARG00000042833 73 1 1.000 - - - - - - - - ring finger and FYVE-like domain containing E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-2274]
14. CPNE7 ENSDARG00000102584 95 1 1.000 - - - - - - - - copine VII [Source:ZFIN;Acc:ZDB-GENE-131125-70]
15. TMEM74B ENSDARG00000078868 45 1 1.000 - - - - - - - - transmembrane protein 74B [Source:ZFIN;Acc:ZDB-GENE-120120-1]
16. si:ch211-255g12.5 si:ch211-255g12.5 7 1 1.000 - - - - - - - -
17. mgat4a ENSDARG00000063330 3 1 1.000 - - - - - - - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A [Source:ZFIN;Acc:ZDB-GENE-070912-27]
18. oaz2b ENSDARG00000059815 38 1 1.000 - - - - - - - - ornithine decarboxylase antizyme 2b [Source:ZFIN;Acc:ZDB-GENE-070313-1]
19. chico ENSDARG00000019588 77 1 1.000 - - - - - - - - chico [Source:ZFIN;Acc:ZDB-GENE-000210-28]
20. dlgap3 ENSDARG00000055459 85 1 1.000 - - - - - - - - discs, large (Drosophila) homolog-associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-060503-413]
21. zgc:112038 ENSDARG00000046140 73 1 1.000 - - - - - - - - zgc:112038 [Source:ZFIN;Acc:ZDB-GENE-050522-271]
22. flrt1a 107 1 - - - - - 1.000 - - - fibronectin leucine rich transmembrane protein 1a, transcript variant X2
23. si:ch211-152f6.6 si:ch211-152f6.6 278 0.985 - - - - - 0.985 - - -
24. pdgfra ENSDARG00000070494, ENSDARG00000113952 6 0.982 - - - - 0.982 - - - - platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
25. CR854899.1 ENSDARG00000102357 8 0.982 - - - - 0.982 - - - -
26. CU855953.1 CU855953.1 137 0.974 - - - - - 0.974 - - -
27. irf8 ENSDARG00000056407 85 0.969 - - - - 0.969 - - - - interferon regulatory factor 8 [Source:ZFIN;Acc:ZDB-GENE-040718-367]
28. NHSL1 NHSL1 182 0.961 - - - - - 0.961 - - -
29. evlb ENSDARG00000099720 245 0.955 - - - - - 0.955 - - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
30. cpeb1a ENSDARG00000045932 81 0.951 0.951 - - - - - - - - cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
31. c1qa ENSDARG00000044613, ENSDARG00000109639 35 0.951 0.951 - - - - - - - - complement component 1, q subcomponent, A chain [Source:ZFIN;Acc:ZDB-GENE-050522-86]
32. bhlhe22 ENSDARG00000058039 1673 0.949 - - - - - 0.949 - - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
33. chrm4a ENSDARG00000069254 32 0.946 - - - - - 0.946 - - - cholinergic receptor, muscarinic 4a [Source:ZFIN;Acc:ZDB-GENE-090410-6]
34. fndc1 ENSDARG00000002847 178 0.941 0.941 - - - - - - - - fibronectin type III domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-332]
35. AL840631.3 AL840631.3 82 0.941 0.941 - - - - - - - -
36. snx24 ENSDARG00000053527 31 0.941 0.941 - - - - - - - - sorting nexin 24 [Source:ZFIN;Acc:ZDB-GENE-050913-45]
37. pycrl pycrl 80 0.941 0.941 - - - - - - - -
38. APBB3 ENSDARG00000053771 654 0.939 - - - - - 0.939 - - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
39. zgc:110699 ENSDARG00000017474 381 0.93 - - - - - 0.930 - - - zgc:110699 [Source:ZFIN;Acc:ZDB-GENE-050522-487]
40. igsf9ba ENSDARG00000033845 158 0.93 - - - - - 0.930 - - - immunoglobulin superfamily, member 9Ba [Source:ZFIN;Acc:ZDB-GENE-060503-729]
41. pbx3a ENSDARG00000089262 97 0.929 - - - - - 0.929 - - - pre-B-cell leukemia homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-031218-1]
42. irak1 ENSDARG00000025949 19 0.921 - - - - 0.921 - - - - interleukin-1 receptor-associated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071116-5]
43. pcsk9 ENSDARG00000074185 8 0.921 - - - - 0.921 - - - - proprotein convertase subtilisin/kexin type 9 [Source:ZFIN;Acc:ZDB-GENE-060927-1]
44. PRKAR2B ENSDARG00000036446 812 0.921 - - - - - 0.921 - - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
45. skap1 ENSDARG00000001498, ENSDARG00000114047 55 0.92 - - - - - 0.920 - - - src kinase associated phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-090721-1]
46. SNORA74 SNORA74 284 0.918 - - - - - 0.918 - - -
47. si:ch73-176g19.2 si:ch73-176g19.2 2 0.914 - - - - 0.914 - - - -
48. CABZ01021538.1 CABZ01021538.1 67 0.908 - - - - - 0.908 - - -
49. CABZ01073740.1 CABZ01073740.1 27 0.906 - - - - 0.906 - - - -
50. KCTD5 KCTD5 109 0.904 - - - - - 0.904 - - -
51. CCL19_1 CCL19_1 40 0.903 0.903 - - - - - - - -
52. rassf2a ENSDARG00000029865, ENSDARG00000113625 1134 0.902 - - - - - 0.902 - - - Ras association (RalGDS/AF-6) domain family member 2a [Source:ZFIN;Acc:ZDB-GENE-040912-124]
53. zgc:100906 ENSDARG00000033599 344 0.901 - - - - - 0.901 - - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
54. diras1a ENSDARG00000028066 126 0.9 - - - - - 0.900 - - - DIRAS family, GTP-binding RAS-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5788]
55. LRFN5_1 LRFN5_1 96 0.899 - - - - - 0.899 - - -
56. CREB3L3 CREB3L3 24 0.898 - - - - 0.898 - - - -
57. dpysl5b ENSDARG00000059311 600 0.898 - - - - - 0.898 - - - dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
58. tusc3 ENSDARG00000078854 4 0.896 - - - - 0.896 - - - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
59. zgc:171516 zgc:171516 5 0.896 - - - - 0.896 - - - -
60. si:ch211-285c6.4 ENSDARG00000095410 4 0.896 - - - - 0.896 - - - - si:ch211-285c6.4 [Source:ZFIN;Acc:ZDB-GENE-041001-97]
61. pth1b ENSDARG00000091961, ENSDARG00000115353 5 0.896 - - - - 0.896 - - - - parathyroid hormone 1b [Source:ZFIN;Acc:ZDB-GENE-040623-2]
62. CR382283.2 CR382283.2 1 0.896 - - - - 0.896 - - - -
63. CABZ01055343.1 CABZ01055343.1 12 0.896 - - - - 0.896 - - - -
64. aglb ENSDARG00000100352 22 0.896 - - - - 0.896 - - - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b [Source:ZFIN;Acc:ZDB-GENE-050309-54]
65. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 0.896 - - - - 0.896 - - - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
66. mbnl3 ENSDARG00000016085 6 0.896 - - - - 0.896 - - - - muscleblind-like splicing regulator 3 [Source:ZFIN;Acc:ZDB-GENE-081002-3]
67. pex11b ENSDARG00000069147 1 0.896 - - - - 0.896 - - - - peroxisomal biogenesis factor 11 beta [Source:ZFIN;Acc:ZDB-GENE-060825-289]
68. MYADM_1 ENSDARG00000086815 1 0.896 - - - - 0.896 - - - - myeloid associated differentiation marker [Source:HGNC Symbol;Acc:HGNC:7544]
69. allc ENSDARG00000042562 12 0.896 - - - - 0.896 - - - - allantoicase [Source:ZFIN;Acc:ZDB-GENE-040718-471]
70. CR848787.1 CR848787.1 2 0.896 - - - - 0.896 - - - -
71. si:dkey-46d17.4 si:dkey-46d17.4 1 0.896 - - - - 0.896 - - - -
72. atf1 ENSDARG00000044301, ENSDARG00000109865 2 0.896 - - - - 0.896 - - - - activating transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4334]
73. si:ch211-53m15.2 ENSDARG00000094928 1 0.896 - - - - 0.896 - - - - si:ch211-53m15.2 [Source:ZFIN;Acc:ZDB-GENE-100922-24]
74. pdgfb pdgfb 5 0.896 - - - - 0.896 - - - -
75. CABZ01117519.1 CABZ01117519.1 1 0.896 - - - - 0.896 - - - -
76. zgc:165453 ENSDARG00000078183 3 0.896 - - - - 0.896 - - - - zgc:165453 [Source:ZFIN;Acc:ZDB-GENE-070720-13]
77. ninj2 ENSDARG00000079824 1 0.896 - - - - 0.896 - - - - ninjurin 2 [Source:ZFIN;Acc:ZDB-GENE-100422-19]
78. rhobtb2b ENSDARG00000089340 4 0.896 - - - - 0.896 - - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
79. CR385046.7 CR385046.7 1 0.896 - - - - 0.896 - - - -
80. fermt3b ENSDARG00000030938 17 0.896 - - - - 0.896 - - - - fermitin family member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1366]
81. iqsec3b ENSDARG00000093091 10 0.896 - - - - 0.896 - - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
82. RBBP6_11 RBBP6_11 6 0.896 - - - - 0.896 - - - -
83. ftr19_1 ENSDARG00000094131 1 0.896 - - - - 0.896 - - - - finTRIM family, member 19 [Source:ZFIN;Acc:ZDB-GENE-090506-5]
84. CD97_2 CD97_2 15 0.896 - - - - 0.896 - - - -
85. si:dkey-88j15.4 ENSDARG00000079471 3 0.896 - - - - 0.896 - - - - si:dkey-88j15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-55]
86. dyrk1aa ENSDARG00000063570 14 0.896 - - - - 0.896 - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, a [Source:ZFIN;Acc:ZDB-GENE-050302-29]
87. eva1c ENSDARG00000056024 1 0.896 - - - - 0.896 - - - - eva-1 homolog C (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-091204-329]
88. THEG ENSDARG00000078644 121 0.896 - - - - 0.896 - - - - theg spermatid protein [Source:ZFIN;Acc:ZDB-GENE-070912-59]
89. uprt ENSDARG00000035549, ENSDARG00000110518 2 0.896 - - - - 0.896 - - - - uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2411]
90. cbln10 ENSDARG00000023157 17 0.896 - - - - 0.896 - - - - cerebellin 10 [Source:ZFIN;Acc:ZDB-GENE-030131-4615]
91. SPTBN4 ENSDARG00000092624 6 0.896 - - - - 0.896 - - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
92. si:busm1-228j01.5 si:busm1-228j01.5 9 0.896 - - - - 0.896 - - - -
93. si:ch211-139k8.3 si:ch211-139k8.3 1 0.896 - - - - 0.896 - - - -
94. si:ch211-113a14.17 15 0.896 - - - - 0.896 - - - - si:ch211-113a14.17
95. LGALS3BP LGALS3BP 51 0.896 - - - - 0.896 - - - -
96. BX004993.1 BX004993.1 1 0.896 - - - - 0.896 - - - -
97. si:dkeyp-69b9.6 ENSDARG00000014825 5 0.896 - - - - 0.896 - - - - si:dkeyp-69b9.6 [Source:ZFIN;Acc:ZDB-GENE-100922-227]
98. dolk ENSDARG00000076991 7 0.896 - - - - 0.896 - - - - dolichol kinase [Source:ZFIN;Acc:ZDB-GENE-070410-59]
99. mtp 1 0.896 - - - - 0.896 - - - - microsomal triglyceride transfer protein
100. mark4a ENSDARG00000023914, ENSDARG00000112220 445 0.893 - - - - - 0.893 - - - MAP/microtubule affinity-regulating kinase 4a [Source:ZFIN;Acc:ZDB-GENE-060531-156]

There are 791 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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