Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for hnf4a

Gene Name Gene ID Reads Annotation
hnf4a ENSDARG00000021494, ENSDARG00000112985 336 hepatocyte nuclear factor 4, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-1077]










Genes with expression patterns similar to hnf4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hnf4a ENSDARG00000021494, ENSDARG00000112985 336 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 hepatocyte nuclear factor 4, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-1077]
2. angptl3 ENSDARG00000044365 574 2.283 - - - - - 0.746 0.776 0.761 - angiopoietin-like 3 [Source:ZFIN;Acc:ZDB-GENE-010817-3]
3. slc43a2a ENSDARG00000036848 6798 2.236 - - - - - 0.724 0.749 0.763 - solute carrier family 43 (amino acid system L transporter), member 2a [Source:ZFIN;Acc:ZDB-GENE-040426-964]
4. sesn3 ENSDARG00000015822 5328 2.216 - - - - - 0.742 0.722 0.752 - sestrin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2924]
5. si:dkey-228a15.1 ENSDARG00000095698 267 1.739 - 0.927 - - 0.812 - - - - si:dkey-228a15.1 [Source:ZFIN;Acc:ZDB-GENE-060503-344]
6. mmp13a ENSDARG00000012395, ENSDARG00000114451 178 1.693 - 0.782 - - - 0.911 - - - matrix metallopeptidase 13a [Source:ZFIN;Acc:ZDB-GENE-031202-2]
7. hao2 ENSDARG00000027992, ENSDARG00000116498 615 1.686 - - - - - 0.912 0.774 - - hydroxyacid oxidase 2 (long chain) [Source:ZFIN;Acc:ZDB-GENE-040426-1239]
8. CABZ01066502.1 CABZ01066502.1 783 1.639 - - - - - 0.879 - 0.760 -
9. pfas ENSDARG00000003750 296 1.633 - - - - - 0.847 0.786 - - phosphoribosylformylglycinamidine synthase [Source:ZFIN;Acc:ZDB-GENE-030131-4420]
10. CR381544.1 ENSDARG00000088187 821 1.628 - - - - - 0.782 0.846 - -
11. slc48a1b ENSDARG00000026109 1427 1.628 - - - - - 0.920 0.708 - - solute carrier family 48 (heme transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8226]
12. btd ENSDARG00000099596 88 1.623 - 0.713 - - - 0.910 - - - biotinidase [Source:ZFIN;Acc:ZDB-GENE-060825-186]
13. si:dkey-118k5.3 ENSDARG00000087736 155 1.61 - - - - - 0.783 0.827 - - si:dkey-118k5.3 [Source:ZFIN;Acc:ZDB-GENE-121214-294]
14. atpv0e1 atpv0e1 1957 1.608 - - - - - 0.764 0.844 - -
15. C3_1 C3_1 637 1.588 - - - - - 0.837 0.751 - -
16. exoc7 ENSDARG00000087229 987 1.565 - - - - - 0.791 0.774 - - exocyst complex component 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2752]
17. zgc:64085 zgc:64085 955 1.562 - - - - - - 0.765 0.797 -
18. aqp12 ENSDARG00000043279 1881 1.546 - - - - - 0.799 - 0.747 - aquaporin 12 [Source:ZFIN;Acc:ZDB-GENE-040718-310]
19. rpia ENSDARG00000056640, ENSDARG00000110576 8288 1.54 - - - - - 0.822 - 0.718 - ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase) [Source:ZFIN;Acc:ZDB-GENE-041114-24]
20. zgc:101583 ENSDARG00000026682, ENSDARG00000112271 971 1.539 0.708 - - - - 0.831 - - - zgc:101583 [Source:ZFIN;Acc:ZDB-GENE-041212-75]
21. zgc:194392 ENSDARG00000074809 329 1.532 - - - - - 0.816 0.716 - - zgc:194392 [Source:ZFIN;Acc:ZDB-GENE-030131-4774]
22. zgc:101040 ENSDARG00000005176 369 1.53 - - - - - 0.777 0.753 - - zgc:101040 [Source:ZFIN;Acc:ZDB-GENE-040801-107]
23. EPS8L2 ENSDARG00000058108 484 1.52 - - - - - 0.729 0.791 - - EPS8 like 2 [Source:ZFIN;Acc:ZDB-GENE-131121-340]
24. epas1a ENSDARG00000008697 3225 1.513 - - - - - 0.798 0.715 - - endothelial PAS domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4490]
25. ypel5 ENSDARG00000088929 1011 1.513 - - - - - 0.778 0.735 - - yippee-like 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1220]
26. zgc:158403 ENSDARG00000062757 710 1.511 - - - - - - 0.765 0.746 - zgc:158403 [Source:ZFIN;Acc:ZDB-GENE-061215-116]
27. slc27a1b ENSDARG00000038352, ENSDARG00000104949 298 1.51 - - - - - 0.770 0.740 - - solute carrier family 27 (fatty acid transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-061013-672]
28. cln3 ENSDARG00000037865 539 1.505 - - - - 0.750 0.755 - - - ceroid-lipofuscinosis, neuronal 3 [Source:ZFIN;Acc:ZDB-GENE-041114-174]
29. hoga1 ENSDARG00000018944 800 1.497 - - - - - 0.702 0.795 - - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2242]
30. dennd3a ENSDARG00000078797 542 1.486 - 0.713 - - - - 0.773 - - DENN/MADD domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-091230-6]
31. mst1 ENSDARG00000103308 581 1.484 - - - - 0.779 - - 0.705 - macrophage stimulating 1 [Source:ZFIN;Acc:ZDB-GENE-020806-3]
32. sidt2 ENSDARG00000045976 1997 1.48 - - - - - - 0.729 0.751 - SID1 transmembrane family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7356]
33. fbxw11a ENSDARG00000104806 1815 1.476 0.757 - - - - 0.719 - - - F-box and WD repeat domain containing 11a [Source:ZFIN;Acc:ZDB-GENE-030131-6305]
34. shisa2 856 1.472 - - - - - 0.756 0.716 - - shisa family member 2, transcript variant X2
35. rasd1 ENSDARG00000019274 1898 1.459 - - - - - - 0.701 0.758 - RAS, dexamethasone-induced 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1473]
36. dmgdh ENSDARG00000025703 6088 1.436 - - - - - - - 0.717 0.719 dimethylglycine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-080227-8]
37. rgn ENSDARG00000098645, ENSDARG00000114128 936 1.434 - - 0.714 - - 0.720 - - - regucalcin [Source:ZFIN;Acc:ZDB-GENE-040718-68]
38. znrf2a ENSDARG00000077855 1845 1.434 - - - - - - 0.726 - 0.708 zinc and ring finger 2a [Source:ZFIN;Acc:ZDB-GENE-070820-15]
39. comtd1 ENSDARG00000078918 238 1.425 - - - - - 0.710 - 0.715 - catechol-O-methyltransferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1072]
40. ccsapb ENSDARG00000040085 784 1.421 - - - - - 0.715 0.706 - - centriole, cilia and spindle-associated protein b [Source:ZFIN;Acc:ZDB-GENE-081107-51]
41. soat2 ENSDARG00000059824 62 1.419 - 0.714 - - - - 0.705 - - sterol O-acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-061013-742]
42. plg ENSDARG00000023111 2429 1.414 - - - - - 0.701 - 0.713 - plasminogen [Source:ZFIN;Acc:ZDB-GENE-030131-1411]
43. slc22a6l ENSDARG00000055523 370 1.409 - - - - - - 0.702 0.707 - solute carrier family 22 (organic anion transporter), member 6, like [Source:ZFIN;Acc:ZDB-GENE-040426-2249]
44. mgmt ENSDARG00000043275, ENSDARG00000111616 169 0.942 - - - - - 0.942 - - - O-6-methylguanine-DNA methyltransferase [Source:ZFIN;Acc:ZDB-GENE-120614-1]
45. LPHN1 LPHN1 152 0.929 - - - - - 0.929 - - -
46. PAQR9 ENSDARG00000052059 203 0.924 - - - - - 0.924 - - - progestin and adipoQ receptor family member 9 [Source:HGNC Symbol;Acc:HGNC:30131]
47. adam17b ENSDARG00000093093 792 0.923 - - - - - 0.923 - - - ADAM metallopeptidase domain 17b [Source:ZFIN;Acc:ZDB-GENE-041001-199]
48. CABZ01072607.1 ENSDARG00000113761 784 0.922 - - - - - 0.922 - - - dynein cytoplasmic 2 heavy chain 1 [Source:NCBI gene;Acc:100332402]
49. LPHN2 LPHN2 1971 0.92 - - - - - 0.920 - - -
50. ube2q1 ENSDARG00000100766 678 0.918 - - - - - 0.918 - - - ubiquitin-conjugating enzyme E2Q family member 1 [Source:ZFIN;Acc:ZDB-GENE-050522-329]
51. cox4i2 ENSDARG00000022509 362 0.914 - - - - - 0.914 - - - cytochrome c oxidase subunit 4I2 [Source:ZFIN;Acc:ZDB-GENE-040426-1775]
52. si:dkey-192g7.3 ENSDARG00000094012 105 0.913 - - - - - 0.913 - - - si:dkey-192g7.3 [Source:ZFIN;Acc:ZDB-GENE-070912-411]
53. micu1 ENSDARG00000063358 131 0.912 - - - - - 0.912 - - - mitochondrial calcium uptake 1 [Source:ZFIN;Acc:ZDB-GENE-070410-22]
54. ENSDARG00000086641 ENSDARG00000086641 1819 0.909 - - - - - 0.909 - - -
55. ctps1a ENSDARG00000030700 3868 0.903 - - - - - - 0.903 - - CTP synthase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-808]
56. si:dkeyp-22c6.1 si:dkeyp-22c6.1 71 0.902 - - - - - 0.902 - - -
57. cabp1a ENSDARG00000019990 110 0.902 - - - - - 0.902 - - - calcium binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041010-36]
58. nmnat1 ENSDARG00000105748 102 0.9 - - - - - 0.900 - - - nicotinamide nucleotide adenylyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-101]
59. B3GNT2_1 B3GNT2_1 380 0.9 - - - - - 0.900 - - -
60. sord ENSDARG00000053405 2406 0.899 - - - - - 0.899 - - - sorbitol dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-1231]
61. cyp19a1b ENSDARG00000098360 8 0.897 - - - - - 0.897 - - - cytochrome P450, family 19, subfamily A, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-001103-4]
62. si:dkey-211g8.5 ENSDARG00000092259 224 0.897 - - - - - 0.897 - - - si:dkey-211g8.5 [Source:ZFIN;Acc:ZDB-GENE-060503-718]
63. lgals9l1 ENSDARG00000025903 58 0.895 - - - - - 0.895 - - - lectin, galactoside-binding, soluble, 9 (galectin 9)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9543]
64. hnf4g ENSDARG00000071565 117 0.895 - - - - - 0.895 - - - hepatocyte nuclear factor 4, gamma [Source:ZFIN;Acc:ZDB-GENE-060929-100]
65. aga ENSDARG00000004889, ENSDARG00000114305 368 0.892 - - - - - 0.892 - - - aspartylglucosaminidase [Source:ZFIN;Acc:ZDB-GENE-040426-2311]
66. st6galnac1.1 ENSDARG00000043814 95 0.892 - - - - - 0.892 - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041014-160]
67. nos1apa ENSDARG00000078725, ENSDARG00000105071 3815 0.892 - - - - - - 0.892 - - nitric oxide synthase 1 (neuronal) adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-081024-1]
68. inhbaa ENSDARG00000012671 207 0.89 - - - - - 0.890 - - - inhibin subunit beta Aa [Source:ZFIN;Acc:ZDB-GENE-000210-21]
69. pex1 ENSDARG00000098904 168 0.889 - - - - - 0.889 - - - peroxisomal biogenesis factor 1 [Source:ZFIN;Acc:ZDB-GENE-070530-1]
70. CR352265.1 ENSDARG00000062758 39 0.889 - - - - - 0.889 - - -
71. slc35b3 ENSDARG00000045437 370 0.889 - - - - - 0.889 - - - solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3 [Source:ZFIN;Acc:ZDB-GENE-060312-46]
72. CR735107.2 CR735107.2 476 0.888 - - - - - 0.888 - - -
73. ptger2b ENSDARG00000037033, ENSDARG00000116581 15 0.888 - - - - - 0.888 - - - prostaglandin E receptor 2b (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040724-267]
74. si:dkeyp-59c12.1 ENSDARG00000038112 186 0.886 - - - - - 0.886 - - - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
75. dph7 ENSDARG00000062083 248 0.886 - - - - - 0.886 - - - diphthamide biosynthesis 7 [Source:ZFIN;Acc:ZDB-GENE-070410-57]
76. mfsd12a ENSDARG00000061908 68 0.885 - - - - - 0.885 - - - major facilitator superfamily domain containing 12a [Source:ZFIN;Acc:ZDB-GENE-030131-4642]
77. SHKBP1 ENSDARG00000105050 1139 0.885 - - - - - 0.885 - - - SH3KBP1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:19214]
78. gbp1 ENSDARG00000038668 520 0.884 - - - - - 0.884 - - - guanylate binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040718-32]
79. MPZL2 MPZL2 31 0.884 - - - - - 0.884 - - -
80. ABCC6_1 ABCC6_1 403 0.884 - - - - - 0.884 - - -
81. CABZ01044346.1 CABZ01044346.1 12 0.884 - - - - - 0.884 - - -
82. BICD2 ENSDARG00000075571 401 0.884 - - - - - 0.884 - - - bicaudal D homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-120717-1]
83. myo7bb ENSDARG00000077201 7 0.884 - - - - - 0.884 - - - myosin VIIBb [Source:ZFIN;Acc:ZDB-GENE-070912-482]
84. ostf1_1 ENSDARG00000091555, ENSDARG00000114550 75 0.884 - - - - - 0.884 - - - osteoclast stimulating factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-157]
85. ralgps1 ENSDARG00000068370 39 0.884 - - - - - 0.884 - - - Ral GEF with PH domain and SH3 binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-070720-16]
86. bmper ENSDARG00000101980 668 0.883 - - - - - 0.883 - - - BMP binding endothelial regulator [Source:ZFIN;Acc:ZDB-GENE-030219-146]
87. wdfy2 ENSDARG00000040453 406 0.882 - - - - - 0.882 - - - WD repeat and FYVE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041111-211]
88. si:dkey-61l1.4 ENSDARG00000092567 1012 0.882 - - - - - 0.882 - - - si:dkey-61l1.4 [Source:ZFIN;Acc:ZDB-GENE-070705-483]
89. timm50 ENSDARG00000031098, ENSDARG00000109900 988 0.882 - - - - - 0.882 - - - translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1618]
90. si:ch211-131e11.16 si:ch211-131e11.16 111 0.881 - 0.881 - - - - - - -
91. APOLD1_1 APOLD1_1 590 0.88 - - - - - 0.880 - - -
92. si:rp71-68n21.11 si:rp71-68n21.11 146 0.879 - 0.879 - - - - - - -
93. wu:fb11h05 wu:fb11h05 126 0.878 - - - - - 0.878 - - -
94. polr3a ENSDARG00000102569 1072 0.878 - - - - - 0.878 - - - polymerase (RNA) III (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-050208-103]
95. irg1l ENSDARG00000062788 503 0.878 - - - - - 0.878 - - - immunoresponsive gene 1, like [Source:ZFIN;Acc:ZDB-GENE-061103-301]
96. ATP10B ENSDARG00000076230 989 0.878 - - - - - 0.878 - - - ATPase phospholipid transporting 10B [Source:ZFIN;Acc:ZDB-GENE-130530-796]
97. syt14b ENSDARG00000001891 85 0.877 - - - - - 0.877 - - - synaptotagmin XIVb [Source:ZFIN;Acc:ZDB-GENE-041014-36]
98. zgc:154040 16 0.876 - - - - - 0.876 - - - zgc:154040
99. hnf1a ENSDARG00000009470 60 0.876 - - - - - 0.876 - - - HNF1 homeobox a [Source:ZFIN;Acc:ZDB-GENE-021206-12]
100. chia.3 ENSDARG00000009612 14 0.876 - - - - - 0.876 - - - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]

There are 934 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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