Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hnf1ba

Gene Name Gene ID Reads Annotation
hnf1ba ENSDARG00000006615, ENSDARG00000115522 1124 HNF1 homeobox Ba [Source:ZFIN;Acc:ZDB-GENE-020104-1]










Genes with expression patterns similar to hnf1ba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hnf1ba ENSDARG00000006615, ENSDARG00000115522 1124 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 HNF1 homeobox Ba [Source:ZFIN;Acc:ZDB-GENE-020104-1]
2. CU596012.2 CU596012.2 1046 2.481 - 0.854 - - - 0.720 0.907 - -
3. esrrb ENSDARG00000100847 636 2.455 - - - - 0.973 0.778 0.704 - - estrogen-related receptor beta [Source:ZFIN;Acc:ZDB-GENE-040616-2]
4. AL928724.1 ENSDARG00000097525 421 2.391 - 0.707 - - - 0.776 0.908 - -
5. pax8 ENSDARG00000015879 368 2.38 0.748 0.711 - - - - 0.921 - - paired box 8 [Source:ZFIN;Acc:ZDB-GENE-001030-3]
6. si:ch211-207j7.2 ENSDARG00000090793 316 2.376 - 0.707 - - - 0.775 0.894 - - si:ch211-207j7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-232]
7. capsla ENSDARG00000103521 277 2.374 - 0.761 - - - 0.807 0.806 - - calcyphosine-like a [Source:ZFIN;Acc:ZDB-GENE-030131-7291]
8. cdh17 ENSDARG00000005112 3816 2.323 - 0.823 - - - 0.718 0.782 - - cadherin 17, LI cadherin (liver-intestine) [Source:ZFIN;Acc:ZDB-GENE-030910-3]
9. ndufa4 ENSDARG00000056108, ENSDARG00000116304 2355 1.834 - 0.860 - - 0.974 - - - - NADH:ubiquinone oxidoreductase subunit A4 [Source:ZFIN;Acc:ZDB-GENE-040426-1962]
10. CASKIN2_1 CASKIN2_1 2299 1.738 - - - - 0.965 - 0.773 - -
11. pmela ENSDARG00000091298 5179 1.717 - - - - 0.859 - 0.858 - - premelanosome protein a [Source:ZFIN;Acc:ZDB-GENE-030131-9818]
12. hmga2 ENSDARG00000069912 20402 1.701 - - - - 0.919 - 0.782 - - high mobility group AT-hook 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3148]
13. anxa4 ENSDARG00000036456 3332 1.698 - 0.742 - - 0.956 - - - - annexin A4 [Source:ZFIN;Acc:ZDB-GENE-030707-1]
14. mboat2a ENSDARG00000031845 1255 1.688 - 0.736 - - 0.952 - - - - membrane bound O-acyltransferase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-041210-257]
15. ranbp9 ENSDARG00000061048 2687 1.67 - 0.746 - - 0.924 - - - - RAN binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-021030-5]
16. hgs ENSDARG00000020960 3574 1.665 - 0.737 - - 0.928 - - - - hepatocyte growth factor-regulated tyrosine kinase substrate [Source:ZFIN;Acc:ZDB-GENE-030131-6107]
17. sgk1 ENSDARG00000025522, ENSDARG00000115600 1650 1.664 - 0.775 - - - - 0.889 - - serum/glucocorticoid regulated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2860]
18. ponzr1 ENSDARG00000090444 540 1.661 - 0.836 - - - - 0.825 - - plac8 onzin related protein 1 [Source:ZFIN;Acc:ZDB-GENE-070727-1]
19. clcnk ENSDARG00000022560 355 1.654 - 0.780 - - - - 0.874 - - chloride channel K [Source:ZFIN;Acc:ZDB-GENE-040426-1379]
20. foxo3b ENSDARG00000042904 5046 1.653 - 0.783 - - 0.870 - - - - forkhead box O3b [Source:ZFIN;Acc:ZDB-GENE-990708-6]
21. mal 906 1.642 - 0.786 - - - - 0.856 - - mal, T-cell differentiation protein
22. mier1a ENSDARG00000041072 1690 1.637 - 0.701 - - 0.936 - - - - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
23. nt5dc2 ENSDARG00000059646 3878 1.637 - - - - 0.901 - 0.736 - - 5'-nucleotidase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060810-17]
24. CR559945.3 CR559945.3 1029 1.63 - 0.768 - - - 0.862 - - -
25. si:dkey-39a18.1 ENSDARG00000045669 599 1.604 - 0.711 - - - - 0.893 - - si:dkey-39a18.1 [Source:ZFIN;Acc:ZDB-GENE-041210-127]
26. hsd20b2 ENSDARG00000031336, ENSDARG00000111087 246 1.601 - - - - - 0.863 0.738 - - hydroxysteroid (20-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030804-21]
27. nav2b ENSDARG00000001879 1121 1.597 - - - - - 0.839 0.758 - - neuron navigator 2b [Source:ZFIN;Acc:ZDB-GENE-061207-13]
28. si:dkey-95p16.2 ENSDARG00000093484 3413 1.595 - 0.760 - - 0.835 - - - - si:dkey-95p16.2 [Source:ZFIN;Acc:ZDB-GENE-081105-65]
29. cxcl-c5c cxcl-c5c 182 1.595 - 0.733 - - - - 0.862 - -
30. sdc4 ENSDARG00000059906 10105 1.579 - 0.710 - - 0.869 - - - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
31. atp1a1a.4 ENSDARG00000001870 1864 1.575 - - - - - 0.791 0.784 - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-001212-4]
32. hook1 ENSDARG00000042946 452 1.561 - 0.740 - - - - 0.821 - - hook microtubule-tethering protein 1 [Source:ZFIN;Acc:ZDB-GENE-041001-159]
33. cldnh ENSDARG00000069503 2410 1.56 - 0.720 - - - - 0.840 - - claudin h [Source:ZFIN;Acc:ZDB-GENE-010328-8]
34. clic5b_1 ENSDARG00000070584 149 1.558 - - - - - 0.764 0.794 - - chloride intracellular channel 5b [Source:ZFIN;Acc:ZDB-GENE-040426-2542]
35. si:ch211-218d20.13 si:ch211-218d20.13 5488 1.557 - 0.824 - - - - 0.733 - -
36. si:ch211-270n8.4 87 1.556 - - - - - 0.751 0.805 - - si:ch211-270n8.4
37. slc12a3 ENSDARG00000013855 990 1.544 - 0.754 - - - - 0.790 - - solute carrier family 12 (sodium/chloride transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9505]
38. tnfaip8l3 ENSDARG00000088709 345 1.543 - 0.708 - - - - 0.835 - - tumor necrosis factor, alpha-induced protein 8-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1313]
39. mtx2 ENSDARG00000029415 2205 1.527 - 0.730 - - - - 0.797 - - metaxin 2 [Source:ZFIN;Acc:ZDB-GENE-021210-2]
40. gem ENSDARG00000029112 138 1.527 - 0.763 - - - - 0.764 - - GTP binding protein overexpressed in skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-060825-251]
41. RBM47 ENSDARG00000061985 2498 1.519 0.771 - - - - - 0.748 - - RNA binding motif protein 47 [Source:ZFIN;Acc:ZDB-GENE-030131-9612]
42. rbpms2a ENSDARG00000045930 234 1.517 - 0.751 - - - 0.766 - - - RNA binding protein, mRNA processing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040718-106]
43. SLC47A1_1 SLC47A1_1 130 1.511 - - - - - 0.740 0.771 - -
44. si:dkey-261h17.1 ENSDARG00000095268 11403 1.509 - - - - - 0.768 0.741 - - si:dkey-261h17.1 [Source:ZFIN;Acc:ZDB-GENE-030829-14]
45. emx1 ENSDARG00000039569 787 1.509 - 0.750 - - - - 0.759 - - empty spiracles homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-031007-7]
46. slc9a3r1 slc9a3r1 743 1.498 - - - - - 0.731 0.767 - -
47. nrp1a ENSDARG00000102153 4154 1.496 - - - - - 0.703 0.793 - - neuropilin 1a [Source:ZFIN;Acc:ZDB-GENE-030519-2]
48. tmx2b ENSDARG00000007786 3151 1.494 - 0.793 - - - - 0.701 - - thioredoxin-related transmembrane protein 2b [Source:ZFIN;Acc:ZDB-GENE-040625-105]
49. tmem88b ENSDARG00000069388 501 1.479 - - - - - 0.751 0.728 - - transmembrane protein 88 b [Source:ZFIN;Acc:ZDB-GENE-060929-644]
50. hoxb6a ENSDARG00000010630 1106 1.475 - 0.711 - - - - 0.764 - - homeobox B6a [Source:ZFIN;Acc:ZDB-GENE-990415-106]
51. idh3b ENSDARG00000044753, ENSDARG00000110992 3965 1.471 - 0.755 - - - - 0.716 - - isocitrate dehydrogenase 3 (NAD+) beta [Source:ZFIN;Acc:ZDB-GENE-040625-174]
52. aifm1 ENSDARG00000058088, ENSDARG00000117164 2038 1.47 - 0.727 - - - 0.743 - - - apoptosis-inducing factor, mitochondrion-associated 1 [Source:ZFIN;Acc:ZDB-GENE-030826-11]
53. zgc:64022 ENSDARG00000070705 364 1.465 - 0.752 - - - 0.713 - - - zgc:64022 [Source:ZFIN;Acc:ZDB-GENE-040426-1340]
54. tmem88a ENSDARG00000056920 536 1.461 0.710 - - - - - 0.751 - - transmembrane protein 88 a [Source:ZFIN;Acc:ZDB-GENE-040426-1808]
55. alox5 alox5 406 1.45 - 0.713 - - - 0.737 - - -
56. vsg1 1870 1.436 - 0.710 - - - 0.726 - - - vessel-specific 1
57. gucy2c ENSDARG00000014320, ENSDARG00000116238 322 1.429 - 0.705 - - - - 0.724 - - guanylate cyclase 2C [Source:ZFIN;Acc:ZDB-GENE-091118-67]
58. snx18a ENSDARG00000067713, ENSDARG00000109647 765 1.406 - 0.703 - - - 0.703 - - - sorting nexin 18a [Source:ZFIN;Acc:ZDB-GENE-070705-339]
59. alpl ENSDARG00000015546 334 0.975 - - - - 0.975 - - - - alkaline phosphatase, liver/bone/kidney [Source:ZFIN;Acc:ZDB-GENE-040420-1]
60. Mar-01 Mar-01 176 0.975 - - - - 0.975 - - - -
61. tmem135 ENSDARG00000069157 918 0.975 - - - - 0.975 - - - - transmembrane protein 135 [Source:ZFIN;Acc:ZDB-GENE-070424-70]
62. BX294434.1 ENSDARG00000061272 6493 0.975 - - - - 0.975 - - - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
63. lrrfip2 ENSDARG00000010400 2633 0.974 - - - - 0.974 - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
64. espn ENSDARG00000076414 343 0.974 - - - - 0.974 - - - - espin [Source:ZFIN;Acc:ZDB-GENE-081105-173]
65. tpcn1 ENSDARG00000062362 563 0.973 - - - - 0.973 - - - - two pore segment channel 1 [Source:ZFIN;Acc:ZDB-GENE-060526-199]
66. tbx19 ENSDARG00000079187 133 0.973 - - - - 0.973 - - - - T-box 19 [Source:ZFIN;Acc:ZDB-GENE-110411-5]
67. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 0.973 - - - - 0.973 - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
68. invs ENSDARG00000002213 261 0.973 - - - - 0.973 - - - - inversin [Source:ZFIN;Acc:ZDB-GENE-020507-2]
69. slc39a13 ENSDARG00000000442 1367 0.973 - - - - 0.973 - - - - solute carrier family 39 (zinc transporter), member 13 [Source:ZFIN;Acc:ZDB-GENE-030616-17]
70. CR933820.2 CR933820.2 152 0.973 - - - - 0.973 - - - -
71. myo9al1 myo9al1 1194 0.973 - - - - 0.973 - - - -
72. CHD6 ENSDARG00000017244 219 0.972 - - - - 0.972 - - - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
73. aatkb ENSDARG00000104442 392 0.972 - - - - 0.972 - - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
74. paqr3b ENSDARG00000044253, ENSDARG00000110049 381 0.972 - - - - 0.972 - - - - progestin and adipoQ receptor family member IIIb [Source:ZFIN;Acc:ZDB-GENE-050913-128]
75. BX548000.3 BX548000.3 241 0.972 - - - - 0.972 - - - -
76. znf362 znf362 869 0.972 - - - - 0.972 - - - -
77. kat2a ENSDARG00000104734 802 0.972 - - - - 0.972 - - - - K(lysine) acetyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080403-11]
78. wfikkn2a ENSDARG00000013460 859 0.971 - - - - 0.971 - - - - info WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-120914-1]
79. farp1 ENSDARG00000074381 406 0.971 - - - - 0.971 - - - - FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) [Source:ZFIN;Acc:ZDB-GENE-070424-163]
80. C8H1orf174 C8H1orf174 372 0.971 - - - - 0.971 - - - -
81. nol8 ENSDARG00000044143 425 0.971 - - - - 0.971 - - - - nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
82. rassf10a 417 0.971 - - - - 0.971 - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
83. si:ch211-282k23.2 ENSDARG00000093591 447 0.971 - - - - 0.971 - - - - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
84. minpp1a ENSDARG00000057058, ENSDARG00000110567, ENSDARG00000116432 496 0.97 - - - - 0.970 - - - - multiple inositol-polyphosphate phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-060929-1194]
85. mettl16 ENSDARG00000055838 818 0.97 - - - - 0.970 - - - - methyltransferase like 16 [Source:ZFIN;Acc:ZDB-GENE-040801-130]
86. slc38a4 ENSDARG00000018149 2344 0.97 - - - - 0.970 - - - - solute carrier family 38, member 4 [Source:ZFIN;Acc:ZDB-GENE-041010-14]
87. gpr161 ENSDARG00000055659 454 0.97 - - - - 0.970 - - - - G protein-coupled receptor 161 [Source:ZFIN;Acc:ZDB-GENE-030616-58]
88. arhgap29b ENSDARG00000017748 812 0.969 - - - - 0.969 - - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
89. pole3 ENSDARG00000008551, ENSDARG00000111677, ENSDARG00000114995 485 0.969 - - - - 0.969 - - - - polymerase (DNA directed), epsilon 3 (p17 subunit) [Source:ZFIN;Acc:ZDB-GENE-040426-1773]
90. gsto2 ENSDARG00000033285 583 0.969 - - - - 0.969 - - - - glutathione S-transferase omega 2 [Source:ZFIN;Acc:ZDB-GENE-041114-67]
91. pcdh18a ENSDARG00000089805 1096 0.969 - - - - 0.969 - - - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
92. C1H3orf70 C1H3orf70 634 0.969 - - - - 0.969 - - - -
93. pdcd2l ENSDARG00000002754 417 0.969 - - - - 0.969 - - - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
94. sh3bp5lb 1090 0.969 - - - - 0.969 - - - - SH3-binding domain protein 5-like, b
95. sepsecs ENSDARG00000033861 478 0.968 - - - - 0.968 - - - - Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase [Source:ZFIN;Acc:ZDB-GENE-040426-859]
96. ikbkb ENSDARG00000079123 498 0.968 - - - - 0.968 - - - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
97. gas5 279 0.968 - - - - 0.968 - - - - growth arrest-specific 5, transcript variant X4
98. azi1 azi1 507 0.968 - - - - 0.968 - - - -
99. gon4l ENSDARG00000005867 982 0.967 - - - - 0.967 - - - - gon-4-like (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-070117-2447]
100. frem1b ENSDARG00000062402 750 0.967 - - - - 0.967 - - - - Fras1 related extracellular matrix 1b [Source:ZFIN;Acc:ZDB-GENE-050208-783]

There are 696 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA