Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hmx3

Gene Name Gene ID Reads Annotation
hmx3 hmx3 510










Genes with expression patterns similar to hmx3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hmx3 hmx3 510 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. ntrk2a ENSDARG00000059897 185 1.888 - 0.958 - - - 0.930 - - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
3. CRIP2 ENSDARG00000070670 323 1.85 - 1.000 - - - 0.850 - - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
4. CNTNAP3 ENSDARG00000067824 25 1.799 - 0.885 - - - 0.914 - - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
5. plekho1a ENSDARG00000061191 98 1.791 - 0.885 - - - 0.906 - - - pleckstrin homology domain containing, family O member 1a [Source:ZFIN;Acc:ZDB-GENE-060503-433]
6. SLITRK4 ENSDARG00000079781 54 1.755 - 0.885 - - - 0.870 - - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
7. BAI1 BAI1 173 1.722 - 0.942 - - - 0.780 - - -
8. bai3 bai3 92 1.721 - 0.885 - - - 0.836 - - -
9. ATP6AP1L ATP6AP1L 164 1.683 - 0.885 - - - 0.798 - - -
10. necab2 ENSDARG00000056745, ENSDARG00000110976 304 1.676 - 0.885 - - - 0.791 - - - N-terminal EF-hand calcium binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-167]
11. APBB3 ENSDARG00000053771 654 1.637 0.739 - - - - 0.898 - - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
12. gng3 ENSDARG00000009553 2530 1.635 0.705 - - - - 0.930 - - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
13. BSN BSN 463 1.622 - 0.813 - - - 0.809 - - -
14. vamp2 ENSDARG00000056877 2158 1.616 0.734 - - - - 0.882 - - - vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
15. NPTXR NPTXR 241 1.613 0.708 - - - - 0.905 - - -
16. map1aa ENSDARG00000059601 599 1.607 - 0.733 - - - 0.874 - - - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
17. nr5a1b ENSDARG00000023362 54 1.599 - 0.885 - - - 0.714 - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
18. CABZ01090303.1 CABZ01090303.1 2 1.599 - 0.885 - - - 0.714 - - -
19. pcsk2 ENSDARG00000019451 442 1.596 0.711 0.885 - - - - - - - proprotein convertase subtilisin/kexin type 2 [Source:ZFIN;Acc:ZDB-GENE-090608-1]
20. cenpi ENSDARG00000052565 482 1.591 - - - - - 0.847 0.744 - - centromere protein I [Source:ZFIN;Acc:ZDB-GENE-060810-127]
21. syngr3a ENSDARG00000014871 405 1.591 0.702 - - - - 0.889 - - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
22. syt11b ENSDARG00000056105 578 1.589 - - - - - 0.734 0.855 - - synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
23. NPBWR2 NPBWR2 132 1.55 - - - - - 0.810 0.740 - -
24. pax6a ENSDARG00000103379 3061 1.546 0.734 - - - - 0.812 - - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
25. nefmb ENSDARG00000043697 2052 1.542 0.708 - - - - 0.834 - - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
26. C8H1orf106 C8H1orf106 2690 1.529 0.766 - - - - 0.763 - - -
27. vamp1 ENSDARG00000031283 3094 1.51 0.704 - - - - 0.806 - - - vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
28. si:ch211-152f6.6 si:ch211-152f6.6 278 1.504 0.709 - - - - 0.795 - - -
29. bcl2l10 ENSDARG00000026766 1426 1.5 - - - - - 0.704 0.796 - - BCL2 like 10 [Source:ZFIN;Acc:ZDB-GENE-030825-2]
30. SYT2 ENSDARG00000014169 265 1.488 0.704 - - - - 0.784 - - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
31. MAPK8IP1_1 MAPK8IP1_1 186 1.485 0.739 - - - - 0.746 - - -
32. si:dkey-19e4.5 ENSDARG00000089886 2562 1.484 0.758 - - - - 0.726 - - - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
33. TUBB8P7_1 TUBB8P7_1 2722 1.472 0.721 - - - - 0.751 - - -
34. CDK5R1 CDK5R1 562 1.468 - 0.751 - - - 0.717 - - -
35. rusc1 ENSDARG00000078125 617 1.467 0.705 - - - - 0.762 - - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
36. whsc1l1 8544 1.466 0.761 - - - - - 0.705 - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
37. mllt11 ENSDARG00000071026 2518 1.459 0.755 - - - - 0.704 - - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
38. pop7 ENSDARG00000036394 1684 1.456 - - - - - 0.740 0.716 - - POP7 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-041010-88]
39. snap25a ENSDARG00000020609 4537 1.453 0.713 - - - - 0.740 - - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
40. scn8aa ENSDARG00000005775 792 1.443 0.729 - - - - 0.714 - - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
41. limk1a ENSDARG00000103467 97 1.439 - - - - - 0.721 0.718 - - LIM domain kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061212-3]
42. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.422 0.711 0.711 - - - - - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
43. SCN1B SCN1B 191 1 - 1.000 - - - - - - -
44. npsn ENSDARG00000010423 768 1 - 1.000 - - - - - - - nephrosin [Source:ZFIN;Acc:ZDB-GENE-040420-2]
45. TMEM196 ENSDARG00000114159 80 1 - 1.000 - - - - - - - transmembrane protein 196 [Source:HGNC Symbol;Acc:HGNC:22431]
46. si:dkey-238f9.1 ENSDARG00000079446 51 0.951 - - - - - 0.951 - - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
47. tbx6l 87 0.944 - 0.944 - - - - - - - T-box 6, like, transcript variant X2
48. pgls ENSDARG00000021233 264 0.944 - 0.944 - - - - - - - 6-phosphogluconolactonase [Source:ZFIN;Acc:ZDB-GENE-040822-9]
49. rdh8b ENSDARG00000105060 183 0.942 - 0.942 - - - - - - - retinol dehydrogenase 8b [Source:ZFIN;Acc:ZDB-GENE-040426-1759]
50. FAM69A FAM69A 28 0.942 - 0.942 - - - - - - -
51. nudt18 ENSDARG00000041576 61 0.942 - 0.942 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 18 [Source:ZFIN;Acc:ZDB-GENE-050417-388]
52. cx45.6 cx45.6 26 0.942 - 0.942 - - - - - - -
53. cntnap5b ENSDARG00000075189 16 0.942 - 0.942 - - - - - - - contactin associated protein-like 5b [Source:ZFIN;Acc:ZDB-GENE-070705-209]
54. trpa1b ENSDARG00000031875 39 0.942 - 0.942 - - - - - - - transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]
55. INTS4 ENSDARG00000102953 38 0.942 - 0.942 - - - - - - - integrator complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-120215-81]
56. syt12 ENSDARG00000101776 215 0.942 - 0.942 - - - - - - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
57. zgc:113162 ENSDARG00000052923 62 0.942 - 0.942 - - - - - - - zgc:113162 [Source:ZFIN;Acc:ZDB-GENE-050522-530]
58. zgc:174573 ENSDARG00000079035 89 0.942 - 0.942 - - - - - - - zgc:174573 [Source:ZFIN;Acc:ZDB-GENE-030131-2123]
59. mdm1 ENSDARG00000045675 64 0.942 - 0.942 - - - - - - - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
60. stk19 ENSDARG00000086628 85 0.942 - 0.942 - - - - - - - serine/threonine kinase 19 [Source:ZFIN;Acc:ZDB-GENE-000616-11]
61. lss ENSDARG00000061274 68 0.942 - 0.942 - - - - - - - lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [Source:ZFIN;Acc:ZDB-GENE-050119-7]
62. zswim7 ENSDARG00000067608 179 0.942 - 0.942 - - - - - - - zinc finger, SWIM-type containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-4255]
63. myha ENSDARG00000095930 143 0.942 - 0.942 - - - - - - - myosin, heavy chain a [Source:ZFIN;Acc:ZDB-GENE-060531-50]
64. chico ENSDARG00000019588 77 0.942 - 0.942 - - - - - - - chico [Source:ZFIN;Acc:ZDB-GENE-000210-28]
65. mthfd1a ENSDARG00000018266 286 0.942 - 0.942 - - - - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1a, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase [Source:ZFIN;Acc:ZDB-GENE-041001-127]
66. glt8d2 ENSDARG00000057942, ENSDARG00000111260 34 0.942 - 0.942 - - - - - - - glycosyltransferase 8 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041210-98]
67. zgc:194659 ENSDARG00000079347 17 0.942 - 0.942 - - - - - - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
68. GPR180 73 0.942 - 0.942 - - - - - - - G protein-coupled receptor 180, transcript variant X2
69. si:dkey-14o18.1 si:dkey-14o18.1 108 0.942 - 0.942 - - - - - - -
70. SNORD88 SNORD88 232 0.942 - 0.942 - - - - - - -
71. gdf11 ENSDARG00000044924 534 0.942 - 0.942 - - - - - - - growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
72. si:ch211-149b19.4 ENSDARG00000095911 49 0.942 - 0.942 - - - - - - - si:ch211-149b19.4 [Source:ZFIN;Acc:ZDB-GENE-110411-90]
73. si:dkey-225n22.4 ENSDARG00000077245 86 0.942 - 0.942 - - - - - - - si:dkey-225n22.4 [Source:ZFIN;Acc:ZDB-GENE-120709-30]
74. EIF4G3 EIF4G3 24 0.942 - 0.942 - - - - - - -
75. si:dkey-23a23.2 ENSDARG00000023036 123 0.939 - 0.939 - - - - - - - si:dkey-23a23.2 [Source:ZFIN;Acc:ZDB-GENE-060503-158]
76. lbx1b ENSDARG00000018611 399 0.937 - - - - - 0.937 - - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
77. GRM8_1 GRM8_1 85 0.933 - - - - - 0.933 - - -
78. mapk10 ENSDARG00000102730 108 0.932 - - - - - 0.932 - - - mitogen-activated protein kinase 10 [Source:ZFIN;Acc:ZDB-GENE-051120-117]
79. mapk8a ENSDARG00000031888 44 0.932 - 0.932 - - - - - - - mitogen-activated protein kinase 8a [Source:ZFIN;Acc:ZDB-GENE-080218-17]
80. neto1l ENSDARG00000071596 57 0.931 - - - - - 0.931 - - - neuropilin (NRP) and tolloid (TLL)-like 1, like [Source:ZFIN;Acc:ZDB-GENE-091207-1]
81. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 0.93 - - - - - 0.930 - - - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
82. GALNT16 ENSDARG00000053190 250 0.928 - - - - - 0.928 - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-131120-189]
83. amigo3 ENSDARG00000074469 39 0.928 - - - - - 0.928 - - - adhesion molecule with Ig-like domain 3 [Source:ZFIN;Acc:ZDB-GENE-050208-449]
84. sprn ENSDARG00000056004 128 0.926 - - - - - 0.926 - - - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
85. RAB39B RAB39B 482 0.923 - - - - - 0.923 - - -
86. prdm14 ENSDARG00000045371 106 0.923 - - - - - 0.923 - - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
87. gpr173 ENSDARG00000042922 238 0.922 - - - - - 0.922 - - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
88. actr8 ENSDARG00000103610 367 0.921 - 0.921 - - - - - - - ARP8 actin related protein 8 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-5065]
89. mpnd ENSDARG00000061989 817 0.921 0.921 - - - - - - - - MPN domain containing [Source:ZFIN;Acc:ZDB-GENE-060929-1162]
90. her8.2 ENSDARG00000069675 315 0.918 - - - - - 0.918 - - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
91. gdf10a ENSDARG00000095378 12 0.916 - - - - - 0.916 - - - growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
92. rtel1 ENSDARG00000035074 17 0.916 - - - - - 0.916 - - - regulator of telomere elongation helicase 1 [Source:ZFIN;Acc:ZDB-GENE-050306-11]
93. p2rx3b ENSDARG00000029718 105 0.916 - - - - - 0.916 - - - purinergic receptor P2X, ligand-gated ion channel, 3b [Source:ZFIN;Acc:ZDB-GENE-030319-3]
94. mlphb ENSDARG00000062481 14 0.916 - - - - - 0.916 - - - melanophilin b [Source:ZFIN;Acc:ZDB-GENE-070803-2]
95. si:dkey-70p6.1 ENSDARG00000092039, ENSDARG00000114631 19 0.915 - - - - - 0.915 - - - si:dkey-70p6.1 [Source:ZFIN;Acc:ZDB-GENE-040724-140]
96. actl6b ENSDARG00000034107 9 0.915 - - - - - 0.915 - - - actin-like 6B [Source:ZFIN;Acc:ZDB-GENE-050522-191]
97. lactbl1b ENSDARG00000070467 1 0.915 - - - - - 0.915 - - - lactamase, beta-like 1b [Source:ZFIN;Acc:ZDB-GENE-061207-53]
98. SNORA42 SNORA42 24 0.915 - - - - - 0.915 - - -
99. NRG3 NRG3 22 0.915 - - - - - 0.915 - - -
100. SEMA6B SEMA6B 35 0.915 - - - - - 0.915 - - -

There are 1191 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA