Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hmx2

Gene Name Gene ID Reads Annotation
hmx2 ENSDARG00000070954, ENSDARG00000115364 396 H6 family homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-080506-2]










Genes with expression patterns similar to hmx2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hmx2 ENSDARG00000070954, ENSDARG00000115364 396 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 H6 family homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-080506-2]
2. SLC22A23_1 SLC22A23_1 308 2.498 0.852 - - - - 0.744 0.902 - -
3. adam11 ENSDARG00000079204 298 1.559 - - - - - 0.758 0.801 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
4. KCNA3 KCNA3 748 1.541 - - - - - 0.730 0.811 - -
5. wu:fb63a08 38 1.536 0.806 - - - - - 0.730 - - wu:fb63a08
6. si:ch211-152f6.6 si:ch211-152f6.6 278 1.532 - - 0.769 - - - 0.763 - -
7. mir34 176 1.519 0.766 - - - - 0.753 - - - microRNA 34
8. TDG TDG 1191 1.512 - - - - - 0.729 0.783 - -
9. mhc1zca ENSDARG00000069471 21 1.508 - - - - - 0.746 0.762 - - major histocompatibility complex class I ZCA [Source:ZFIN;Acc:ZDB-GENE-070424-4]
10. kif17 ENSDARG00000055238 12 1.494 - - 0.764 - - - 0.730 - - kinesin family member 17 [Source:ZFIN;Acc:ZDB-GENE-080724-12]
11. rtn1b ENSDARG00000021143 1682 1.465 - - - - - 0.760 0.705 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
12. si:ch211-11c15.3 si:ch211-11c15.3 1279 1.457 - - - - - 0.735 0.722 - -
13. slc4a11 ENSDARG00000075532, ENSDARG00000115789 20 1.457 - - - - - - 0.730 0.727 - solute carrier family 4, sodium borate transporter, member 11 [Source:ZFIN;Acc:ZDB-GENE-090313-183]
14. eng1b eng1b 2544 1.455 - - - - - 0.701 0.754 - -
15. zgc:101731 ENSDARG00000040965 27 1.448 - - - - 0.718 - 0.730 - - zgc:101731 [Source:ZFIN;Acc:ZDB-GENE-040912-57]
16. tmem47 ENSDARG00000057322 4691 1.438 - - - - - 0.730 0.708 - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
17. ppm1ba ENSDARG00000001888 319 1.434 - - 0.712 - - - 0.722 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Ba [Source:ZFIN;Acc:ZDB-GENE-991102-16]
18. cenpp ENSDARG00000044135 96 1.434 0.731 - - - - - 0.703 - - centromere protein P [Source:ZFIN;Acc:ZDB-GENE-040801-74]
19. frmd4bb ENSDARG00000076496 18 1.432 - - - 0.702 - - 0.730 - - FERM domain containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-100921-74]
20. slc1a2b ENSDARG00000102453 3136 1.429 - - - - - 0.728 0.701 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
21. zgc:195245 ENSDARG00000078917, ENSDARG00000115812 49 0.934 - - - - - - 0.934 - - zgc:195245 [Source:ZFIN;Acc:ZDB-GENE-081022-200]
22. thap3 ENSDARG00000041080, ENSDARG00000114392 220 0.896 0.896 - - - - - - - - THAP domain containing, apoptosis associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-050327-4]
23. ptgdsb.2 ENSDARG00000071626 105 0.894 0.894 - - - - - - - - prostaglandin D2 synthase b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030911-3]
24. DNER ENSDARG00000061031 123 0.893 - - - - - - 0.893 - - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
25. C5H9orf172 C5H9orf172 65 0.892 - - - - - - 0.892 - -
26. CCDC89 CCDC89 40 0.892 - - - - - - 0.892 - -
27. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 0.892 - - - - - - 0.892 - -
28. cdk5r2b ENSDARG00000078671 20 0.892 - - - - - - 0.892 - - cyclin-dependent kinase 5, regulatory subunit 2b (p39) [Source:ZFIN;Acc:ZDB-GENE-040801-251]
29. cacna1ab ENSDARG00000006923 12 0.892 - - - - - - 0.892 - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-3]
30. BX571853.2 ENSDARG00000110441 21 0.892 - - - - - - 0.892 - -
31. hcrtr2 ENSDARG00000023722 70 0.892 - - - - - - 0.892 - - hypocretin (orexin) receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070228-3]
32. si:dkey-202n8.1 si:dkey-202n8.1 35 0.892 - - - - - - 0.892 - -
33. nr4a2a ENSDARG00000017007 140 0.892 - - - - - - 0.892 - - nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
34. COX5B ENSDARG00000015978 70 0.892 - - - - - - 0.892 - - cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
35. plekho1a ENSDARG00000061191 98 0.892 - - - - - - 0.892 - - pleckstrin homology domain containing, family O member 1a [Source:ZFIN;Acc:ZDB-GENE-060503-433]
36. mir219-1 101 0.892 - - - - - - 0.892 - - microRNA 219-1
37. si:dkey-175m17.7 ENSDARG00000078317 115 0.892 - - - - - - 0.892 - - si:dkey-175m17.7 [Source:ZFIN;Acc:ZDB-GENE-091204-18]
38. si:dkey-253d23.9 ENSDARG00000074820 24 0.892 - - - - - - 0.892 - - si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
39. pih1d2 ENSDARG00000014849 389 0.892 - - - - - - 0.892 - - PIH1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041212-54]
40. trh ENSDARG00000006868 31 0.892 - - - - - - 0.892 - - thyrotropin-releasing hormone [Source:ZFIN;Acc:ZDB-GENE-020930-1]
41. fam43b ENSDARG00000070222 92 0.892 - - - - - - 0.892 - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
42. rpz3 ENSDARG00000069728 11 0.892 - - - - - - 0.892 - - rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
43. mpp2a ENSDARG00000053453 68 0.892 - - - - - - 0.892 - - membrane protein, palmitoylated 2a (MAGUK p55 subfamily member 2) [Source:ZFIN;Acc:ZDB-GENE-071004-82]
44. BAIAP2 BAIAP2 88 0.892 - - - - - - 0.892 - -
45. vcpip1 ENSDARG00000060177 56 0.892 - - - - - - 0.892 - - valosin containing protein (p97)/p47 complex interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070912-613]
46. camkvl ENSDARG00000057000 40 0.889 - - - - - - 0.889 - - CaM kinase-like vesicle-associated, like [Source:ZFIN;Acc:ZDB-GENE-090311-58]
47. si:dkey-208k4.7 si:dkey-208k4.7 14 0.887 - - - - - - 0.887 - -
48. foxd5 ENSDARG00000042485, ENSDARG00000109712 216 0.887 - - - - - - 0.887 - - forkhead box D5 [Source:ZFIN;Acc:ZDB-GENE-980605-4]
49. ponzr4 ENSDARG00000087440, ENSDARG00000114845 193 0.887 - - - - - - 0.887 - - plac8 onzin related protein 4 [Source:ZFIN;Acc:ZDB-GENE-050411-6]
50. HDX ENSDARG00000079382 513 0.887 - - - - - - 0.887 - - highly divergent homeobox [Source:ZFIN;Acc:ZDB-GENE-140106-165]
51. scamp5 scamp5 797 0.879 - - - - - - 0.879 - -
52. CCDC88A CCDC88A 90 0.875 - - - - - - 0.875 - -
53. nrgna ENSDARG00000039626 50 0.873 - - - - - - 0.873 - - neurogranin (protein kinase C substrate, RC3) a [Source:ZFIN;Acc:ZDB-GENE-090710-4]
54. si:ch73-167f18.4 si:ch73-167f18.4 9 0.873 - - - - - - 0.873 - -
55. asic2 ENSDARG00000006849 18 0.873 - - - - - - 0.873 - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
56. plcd3b ENSDARG00000079572 64 0.873 - - - - - - 0.873 - - phospholipase C, delta 3b [Source:ZFIN;Acc:ZDB-GENE-081222-2]
57. herpud2 ENSDARG00000021033 1800 0.87 0.870 - - - - - - - - HERPUD family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-868]
58. stap2a ENSDARG00000092810 591 0.868 - - - - - - 0.868 - - signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
59. DNAJB14 ENSDARG00000069996 144 0.868 - - - - - - 0.868 - - DnaJ (Hsp40) homolog, subfamily B, member 14 [Source:ZFIN;Acc:ZDB-GENE-061110-138]
60. nrxn3a ENSDARG00000043746 54 0.859 - - - - - - 0.859 - - neurexin 3a [Source:ZFIN;Acc:ZDB-GENE-070206-9]
61. FRRS1L ENSDARG00000103940 224 0.859 - - - - - - 0.859 - - ferric-chelate reductase 1-like [Source:ZFIN;Acc:ZDB-GENE-120827-1]
62. syt9a ENSDARG00000003994 298 0.859 - - - - - - 0.859 - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
63. CHRNB4 ENSDARG00000101677 128 0.855 - - - - - - 0.855 - - cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-120809-1]
64. dscamb ENSDARG00000028118 82 0.854 - - - - - - 0.854 - - Down syndrome cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-031118-67]
65. HMGXB4_1 HMGXB4_1 1122 0.854 - - - - - - 0.854 - -
66. bai3 bai3 92 0.851 - - - - - - 0.851 - -
67. apba1b ENSDARG00000074328 254 0.844 - - - - - - 0.844 - - amyloid beta (A4) precursor protein-binding, family A, member 1b [Source:ZFIN;Acc:ZDB-GENE-070925-3]
68. stx6 ENSDARG00000042742, ENSDARG00000115635 1208 0.844 - - - - - 0.844 - - - syntaxin 6 [Source:ZFIN;Acc:ZDB-GENE-030131-858]
69. xpr1 xpr1 840 0.841 - - - - - - 0.841 - -
70. tnip1 ENSDARG00000015653 94 0.841 0.841 - - - - - - - - TNFAIP3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1502]
71. PPP2R2B PPP2R2B 257 0.839 - - - - - - 0.839 - -
72. KCNAB2 KCNAB2 129 0.839 - - - - - - 0.839 - -
73. CABZ01073417.1 CABZ01073417.1 232 0.835 0.835 - - - - - - - -
74. hnrnpa3 ENSDARG00000059351 453 0.835 - - - - - - 0.835 - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
75. lin7b ENSDARG00000037932 150 0.834 - - - - - - 0.834 - - lin-7 homolog B (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-1]
76. tsen2 ENSDARG00000091851 1467 0.833 0.833 - - - - - - - - TSEN2 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-060929-918]
77. kcnj11l ENSDARG00000031438 369 0.831 - - - - - - 0.831 - - potassium inwardly-rectifying channel, subfamily J, member 11, like [Source:ZFIN;Acc:ZDB-GENE-050222-2]
78. prdm8b ENSDARG00000054683, ENSDARG00000112649 270 0.831 - - - - - - 0.831 - - PR domain containing 8b [Source:ZFIN;Acc:ZDB-GENE-060526-174]
79. limk1a ENSDARG00000103467 97 0.83 - - - - - 0.830 - - - LIM domain kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061212-3]
80. si:ch211-198c19.2 si:ch211-198c19.2 165 0.828 - - - - - - 0.828 - -
81. pcdh2ac ENSDARG00000099783 325 0.827 - - - - - - 0.827 - - protocadherin 2 alpha c [Source:ZFIN;Acc:ZDB-GENE-041118-12]
82. PRKAR2B ENSDARG00000036446 812 0.826 - - - - - - 0.826 - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
83. rcor2 ENSDARG00000008278 1678 0.825 - - - - - - 0.825 - - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
84. mettl16 ENSDARG00000055838 818 0.825 0.825 - - - - - - - - methyltransferase like 16 [Source:ZFIN;Acc:ZDB-GENE-040801-130]
85. MYO5C ENSDARG00000104235 1285 0.824 - - - - - 0.824 - - - myosin VC [Source:ZFIN;Acc:ZDB-GENE-131127-196]
86. MAPK8IP1_1 MAPK8IP1_1 186 0.824 - - - - - 0.824 - - -
87. ehmt1a ENSDARG00000068157 855 0.824 - - - - - 0.824 - - - euchromatic histone-lysine N-methyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-040724-44]
88. C8H17orf59 C8H17orf59 494 0.824 0.824 - - - - - - - -
89. elp4 ENSDARG00000008852 253 0.819 0.819 - - - - - - - - elongator acetyltransferase complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-050417-114]
90. zgc:112001 ENSDARG00000078034 93 0.819 - - - - - - 0.819 - - zgc:112001 [Source:ZFIN;Acc:ZDB-GENE-050417-178]
91. RBPMS ENSDARG00000099396 61 0.817 - - - - - - 0.817 - - RNA binding protein, mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-161017-145]
92. si:dkey-26c10.5 ENSDARG00000088023 9 0.817 - - - - - - 0.817 - - si:dkey-26c10.5 [Source:ZFIN;Acc:ZDB-GENE-060607-13]
93. rnf165a ENSDARG00000077906 133 0.817 - - - - - - 0.817 - - ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
94. C20H1orf198 C20H1orf198 246 0.817 0.817 - - - - - - - -
95. si:dkey-284e7.2 si:dkey-284e7.2 14 0.817 - - - - - - 0.817 - -
96. si:ch211-39a7.1 ENSDARG00000037427 31 0.817 - - - - - - 0.817 - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
97. si:dkey-238f9.1 ENSDARG00000079446 51 0.817 - - - - - - 0.817 - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
98. si:ch211-237c9.3 si:ch211-237c9.3 17 0.817 - - - - - - 0.817 - -
99. tmem91 ENSDARG00000068456 81 0.817 - - - - - - 0.817 - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
100. brf1a ENSDARG00000017835 206 0.817 - - - - - - 0.817 - - BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]

There are 638 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA