Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for hmx1

Gene Name Gene ID Reads Annotation
hmx1 ENSDARG00000095651, ENSDARG00000109725, ENSDARG00000111765 151 H6 family homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-080204-54]










Genes with expression patterns similar to hmx1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hmx1 ENSDARG00000095651, ENSDARG00000109725, ENSDARG00000111765 151 6 - - 1.000 1.000 1.000 - 1.000 1.000 1.000 H6 family homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-080204-54]
2. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 4.178 - - 0.856 0.921 0.769 - - 0.711 0.921 H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
3. cps1 ENSDARG00000020028 67 4.109 - - 0.728 0.825 0.910 - - 0.845 0.801 carbamoyl-phosphate synthase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-081105-17]
4. ahr1b ENSDARG00000023537 44 4.042 - - 0.760 0.725 0.877 - - 0.841 0.839 aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
5. fabp11b ENSDARG00000002311 354 3.464 - - 0.905 0.863 0.838 - - - 0.858 fatty acid binding protein 11b [Source:ZFIN;Acc:ZDB-GENE-050522-391]
6. prdm1b ENSDARG00000098925 440 3.348 - - 0.850 0.829 0.822 - - - 0.847 PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
7. rorb ENSDARG00000033498 544 3.263 - - 0.878 0.703 - - - 0.792 0.890 RAR-related orphan receptor B [Source:ZFIN;Acc:ZDB-GENE-061204-2]
8. pmelb ENSDARG00000033760 206 3.224 - - 0.711 - 0.817 - - 0.806 0.890 premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
9. prox2 ENSDARG00000041952, ENSDARG00000117137 112 3.087 - - 0.706 0.826 0.785 - - - 0.770 prospero homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-081003-3]
10. defbl1 ENSDARG00000075161 211 3.049 - - 0.784 - 0.737 - - 0.717 0.811 defensin, beta-like 1 [Source:ZFIN;Acc:ZDB-GENE-070207-1]
11. atoh7 ENSDARG00000069552 254 3.046 - - 0.723 0.728 - - - 0.701 0.894 atonal bHLH transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-000926-1]
12. cryba2a ENSDARG00000030349 1342 3.039 - - - 0.811 0.735 - - 0.757 0.736 crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
13. foxg1b ENSDARG00000032705 354 2.622 - - 0.831 0.813 - - - - 0.978 forkhead box G1b [Source:ZFIN;Acc:ZDB-GENE-040426-2437]
14. vsx2 ENSDARG00000005574 102 2.585 - - 0.849 0.862 - - - - 0.874 visual system homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001222-1]
15. rx1 ENSDARG00000071684 247 2.583 - - 0.805 - - - - 0.840 0.938 retinal homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-236]
16. pax6l pax6l 54 2.559 - - - - - - 1.000 0.785 0.774
17. cx44.1 cx44.1 799 2.494 - - - 0.864 - - - 0.792 0.838
18. rx2 ENSDARG00000040321 112 2.482 - - 0.828 0.821 - - - - 0.833 retinal homeobox gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-237]
19. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 2.471 - - 0.811 0.846 0.814 - - - - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
20. mipb ENSDARG00000013963 753 2.38 - - - 0.824 - - - 0.767 0.789 major intrinsic protein of lens fiber b [Source:ZFIN;Acc:ZDB-GENE-050706-86]
21. mipa ENSDARG00000037285, ENSDARG00000116133 507 2.362 - - - 0.800 - - - 0.770 0.792 major intrinsic protein of lens fiber a [Source:ZFIN;Acc:ZDB-GENE-040801-41]
22. cx23 ENSDARG00000054150 115 2.35 - - - 0.846 - - - 0.742 0.762 connexin 23 [Source:ZFIN;Acc:ZDB-GENE-050320-121]
23. msnb ENSDARG00000028740, ENSDARG00000109311, ENSDARG00000110190 24 2.349 - - 0.733 - - - - 0.718 0.898 moesin b [Source:ZFIN;Acc:ZDB-GENE-030717-7]
24. crygmx ENSDARG00000053862 482 2.33 - - - 0.826 - - - 0.702 0.802 crystallin, gamma MX [Source:ZFIN;Acc:ZDB-GENE-030131-7732]
25. foxg1a ENSDARG00000070769 928 2.326 - - - 0.863 0.709 - - - 0.754 forkhead box G1a [Source:ZFIN;Acc:ZDB-GENE-990415-267]
26. nrl ENSDARG00000100466 41 2.324 - - 0.707 - 0.796 - - - 0.821 neural retina leucine zipper [Source:ZFIN;Acc:ZDB-GENE-050729-1]
27. fabp7a ENSDARG00000007697 5211 2.314 - - 0.730 0.802 - - - - 0.782 fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
28. cryba1l2 ENSDARG00000014803 47 2.304 - - - 0.804 - - - 0.737 0.763 crystallin, beta A1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-40]
29. lim2.1 ENSDARG00000068974, ENSDARG00000114525 233 2.302 - - - 0.762 0.774 - - - 0.766 lens intrinsic membrane protein 2.1 [Source:ZFIN;Acc:ZDB-GENE-050522-398]
30. si:ch211-212n6.18 si:ch211-212n6.18 233 2.297 - - - 0.707 - - - 0.793 0.797
31. zgc:110053 zgc:110053 69 2.284 - - - 0.714 - - - 0.802 0.768
32. pax6a ENSDARG00000103379 3061 2.277 - - 0.767 - 0.736 - - 0.774 - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
33. grifin ENSDARG00000033382 141 2.275 - - - 0.733 - - - 0.783 0.759 galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
34. capn3a ENSDARG00000041864 89 2.273 - - - 0.776 - - - 0.721 0.776 calpain 3a, (p94) [Source:ZFIN;Acc:ZDB-GENE-040912-97]
35. lim2.4 ENSDARG00000015445 791 2.267 - - - 0.751 - - - 0.753 0.763 lens intrinsic membrane protein 2.4 [Source:ZFIN;Acc:ZDB-GENE-040718-104]
36. lim2.3 ENSDARG00000037402 302 2.245 - - - 0.810 0.702 - - 0.733 - lens intrinsic membrane protein 2.3 [Source:ZFIN;Acc:ZDB-GENE-040718-327]
37. cryba1l1 ENSDARG00000032929 1868 2.233 - - - 0.732 - - - 0.762 0.739 crystallin, beta A1, like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-249]
38. TMEM57 TMEM57 260 2.212 - - - 0.701 0.770 - - 0.741 -
39. crygm2d10 ENSDARG00000087765 358 2.14 - - - 0.706 - - - 0.726 0.708 crystallin, gamma M2d10 [Source:ZFIN;Acc:ZDB-GENE-071004-96]
40. colm colm 36 1.787 - - 0.787 - - - 1.000 - -
41. myhb ENSDARG00000001993 11 1.779 - - - - 0.779 - 1.000 - - myosin, heavy chain b [Source:ZFIN;Acc:ZDB-GENE-081124-1]
42. BX324132.5 BX324132.5 115 1.768 - - - - 0.768 - 1.000 - -
43. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.732 - - - - - - - 0.813 0.919 zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
44. CABZ01087025.1 ENSDARG00000117232 10 1.717 - - - - 0.717 - 1.000 - -
45. ndrg1b ENSDARG00000010420 116 1.714 - - - - - - - 0.824 0.890 N-myc downstream regulated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1648]
46. six3b ENSDARG00000054879 2416 1.711 - - - - - - - 0.859 0.852 SIX homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-990415-128]
47. cspg5b ENSDARG00000099793 67 1.697 - - - - - - - 0.769 0.928 chondroitin sulfate proteoglycan 5b [Source:ZFIN;Acc:ZDB-GENE-060503-368]
48. hes2.2 ENSDARG00000068168 197 1.696 - - - - - - - 0.762 0.934 hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
49. tnni1b ENSDARG00000052708 478 1.685 - - 0.869 - - - 0.816 - - troponin I type 1b (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-041212-37]
50. CU929052.1 CU929052.1 642 1.68 - - - 0.784 0.896 - - - -
51. si:dkey-21o19.2 ENSDARG00000088900 52 1.66 - - - - - - - 0.798 0.862 si:dkey-21o19.2 [Source:ZFIN;Acc:ZDB-GENE-090313-241]
52. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.653 - - - - - - - 0.792 0.861 visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
53. eomesa ENSDARG00000006640 257 1.638 - - - 0.801 0.837 - - - - eomesodermin homolog a [Source:ZFIN;Acc:ZDB-GENE-001228-1]
54. slc6a1a ENSDARG00000045944 260 1.623 - - - - - - - 0.823 0.800 solute carrier family 6 (neurotransmitter transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-060519-23]
55. otc ENSDARG00000062147 95 1.614 - - - - - - - 0.799 0.815 ornithine carbamoyltransferase [Source:ZFIN;Acc:ZDB-GENE-070912-422]
56. nbeaa ENSDARG00000070080 862 1.612 - - - 0.805 - - - 0.807 - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
57. cxxc4 ENSDARG00000077817 197 1.604 - - - - - - - 0.851 0.753 CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
58. CCDC88A_1 CCDC88A_1 12 1.593 - - - - - - - 0.776 0.817
59. neurod6b ENSDARG00000020794 164 1.593 - - - 0.818 0.775 - - - - neuronal differentiation 6b [Source:ZFIN;Acc:ZDB-GENE-010608-2]
60. cryaa ENSDARG00000053502, ENSDARG00000113469 80 1.593 - - - - - - - 0.819 0.774 crystallin, alpha A [Source:ZFIN;Acc:ZDB-GENE-020508-1]
61. foxq2 ENSDARG00000071394 3 1.591 - - - - - - - 0.766 0.825 forkhead box Q2 [Source:ZFIN;Acc:ZDB-GENE-050208-663]
62. cx50.5 cx50.5 15 1.585 - - - 0.778 - - - - 0.807
63. cnih2 ENSDARG00000043662, ENSDARG00000110467, ENSDARG00000113176 74 1.585 - - - - - - - 0.774 0.811 cornichon family AMPA receptor auxiliary protein 2 [Source:ZFIN;Acc:ZDB-GENE-050320-96]
64. pitx3 ENSDARG00000070069 363 1.581 - - - - 0.841 - - - 0.740 paired-like homeodomain 3 [Source:ZFIN;Acc:ZDB-GENE-041229-4]
65. sparcl1 ENSDARG00000074989 80 1.568 - - 0.706 - - - - 0.862 - SPARC-like 1 [Source:ZFIN;Acc:ZDB-GENE-060130-6]
66. crybb1l1 ENSDARG00000007576 1020 1.567 - - - - - - - 0.800 0.767 crystallin, beta B1, like 1 [Source:ZFIN;Acc:ZDB-GENE-100112-3]
67. EPHB6 ENSDARG00000057729 223 1.564 - - 0.775 0.789 - - - - - eph receptor B6 [Source:ZFIN;Acc:ZDB-GENE-100922-51]
68. si:ch211-145g9.7 32 1.557 - - - - 0.806 - - - 0.751 si:ch211-145g9.7, transcript variant X1
69. lingo2 lingo2 67 1.553 - - - - 0.761 - - - 0.792
70. pvalb5 ENSDARG00000032836 242 1.552 - - - 0.806 0.746 - - - - parvalbumin 5 [Source:ZFIN;Acc:ZDB-GENE-050417-336]
71. crygm2d8 ENSDARG00000116164 698 1.551 - - - - - - - 0.758 0.793 crystallin, gamma M2d8 [Source:ZFIN;Acc:ZDB-GENE-040718-321]
72. MLLT4 MLLT4 67 1.549 - - - - - - - 0.745 0.804
73. crybb1l3 ENSDARG00000007655 33 1.547 - - - - - - - 0.736 0.811 crystallin, beta B1, like 3 [Source:ZFIN;Acc:ZDB-GENE-070820-11]
74. foxe3 ENSDARG00000062892 44 1.544 - - 0.720 - 0.824 - - - - forkhead box E3 [Source:ZFIN;Acc:ZDB-GENE-061214-6]
75. si:ch211-152c2.3 ENSDARG00000045898 3448 1.537 - - - 0.741 0.796 - - - - si:ch211-152c2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9914]
76. cryba4 ENSDARG00000024548 111 1.535 - - - - - - - 0.732 0.803 crystallin, beta A4 [Source:ZFIN;Acc:ZDB-GENE-050522-143]
77. nr4a2a ENSDARG00000017007 140 1.535 - - - - 0.719 - - 0.816 - nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
78. sept4a ENSDARG00000010385 75 1.528 - - - - - - - 0.797 0.731 septin 4a [Source:ZFIN;Acc:ZDB-GENE-051120-87]
79. zgc:86723 zgc:86723 299 1.523 - - - - - - - 0.727 0.796
80. mybl1 ENSDARG00000030999 158 1.522 - - - - - - - 0.702 0.820 v-myb avian myeloblastosis viral oncogene homolog-like 1 [Source:ZFIN;Acc:ZDB-GENE-041111-281]
81. cryba2b ENSDARG00000041925 4329 1.52 - - - 0.735 - - - 0.785 - crystallin, beta A2b [Source:ZFIN;Acc:ZDB-GENE-040718-324]
82. RBM33_1 RBM33_1 7 1.516 - - - - - - - 0.711 0.805
83. myt1la ENSDARG00000008209 120 1.515 - - - 0.724 - - - - 0.791 myelin transcription factor 1-like, a [Source:ZFIN;Acc:ZDB-GENE-041001-172]
84. crygm2d6 ENSDARG00000073874 38 1.515 - - - - - - - 0.748 0.767 crystallin, gamma M2d6 [Source:ZFIN;Acc:ZDB-GENE-040625-145]
85. mir124-2 196 1.512 - - - 0.763 - - - - 0.749 microRNA 124-2
86. crygm2d16 ENSDARG00000076790 129 1.512 - - - - - - - 0.729 0.783 crystallin, gamma M2d16 [Source:ZFIN;Acc:ZDB-GENE-071004-53]
87. ggt1a ENSDARG00000023526 26 1.51 - - - - - - - 0.714 0.796 gamma-glutamyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1388]
88. crygm2d14 ENSDARG00000087301 66 1.508 - - - - 0.739 - - - 0.769 crystallin, gamma M2d14 [Source:ZFIN;Acc:ZDB-GENE-070822-20]
89. ephb2a ENSDARG00000037373, ENSDARG00000114174 104 1.506 - - 0.721 - - - - - 0.785 eph receptor B2a [Source:ZFIN;Acc:ZDB-GENE-070713-2]
90. crygm2d9 ENSDARG00000115701 28 1.505 - - - - - - - 0.723 0.782 crystallin, gamma M2d9 [Source:ZFIN;Acc:ZDB-GENE-081105-81]
91. lctla ENSDARG00000036139, ENSDARG00000116316 32 1.5 - - - - - - - 0.746 0.754 lactase-like a [Source:ZFIN;Acc:ZDB-GENE-040718-233]
92. gpr37l1b ENSDARG00000056774, ENSDARG00000114481 143 1.494 - - - 0.747 - - 0.747 - - G protein-coupled receptor 37 like 1b [Source:ZFIN;Acc:ZDB-GENE-081104-324]
93. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 1.494 - - - - 0.783 - - - 0.711 transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
94. ptf1a ENSDARG00000014479 349 1.487 - - - - - - - 0.748 0.739 pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
95. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.483 - - - 0.755 - - - - 0.728 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
96. nkx2.1b nkx2.1b 125 1.477 - - - - - - - 0.729 0.748
97. wu:fc51f04 wu:fc51f04 7074 1.476 - - - - - - - 0.719 0.757
98. crybb1 ENSDARG00000068507 2255 1.475 - - - 0.736 - - - 0.739 - crystallin, beta B1 [Source:ZFIN;Acc:ZDB-GENE-010813-1]
99. pax6b ENSDARG00000045936 349 1.475 - - 0.708 - - - - - 0.767 paired box 6b [Source:ZFIN;Acc:ZDB-GENE-001031-1]
100. si:ch211-212n6.16 si:ch211-212n6.16 314 1.467 - - - - - - - 0.760 0.707

There are 580 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA