Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hmmr

Gene Name Gene ID Reads Annotation
hmmr ENSDARG00000021794, ENSDARG00000111088 2009 hyaluronan-mediated motility receptor (RHAMM) [Source:ZFIN;Acc:ZDB-GENE-030131-731]










Genes with expression patterns similar to hmmr

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hmmr ENSDARG00000021794, ENSDARG00000111088 2009 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 hyaluronan-mediated motility receptor (RHAMM) [Source:ZFIN;Acc:ZDB-GENE-030131-731]
2. rqcd1 2301 2.386 - 0.754 - - - - 0.716 - 0.916 RCD1 required for cell differentiation1 homolog (S. pombe)
3. CR354611.2 CR354611.2 2040 2.325 - 0.855 - - - 0.706 - - 0.764
4. ylpm1 ENSDARG00000043680 7676 2.254 - 0.705 - 0.730 - 0.819 - - - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
5. siah1 ENSDARG00000030871 1590 1.843 - 0.940 - - - - - - 0.903 siah E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-010319-31]
6. NAIF1 ENSDARG00000062753 696 1.838 - 0.939 - - - - - - 0.899 nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
7. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 1.836 - 0.956 - - - - - - 0.880 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
8. ttc3 ENSDARG00000086075 2157 1.806 - - - - 0.880 - - - 0.926 tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
9. ARHGEF15 ENSDARG00000100293 553 1.798 - 0.926 - - - - - - 0.872 Rho guanine nucleotide exchange factor (GEF) 15 [Source:ZFIN;Acc:ZDB-GENE-060526-292]
10. ttc9c ENSDARG00000007025 463 1.791 - 0.945 - - 0.846 - - - - tetratricopeptide repeat domain 9C [Source:ZFIN;Acc:ZDB-GENE-040426-1053]
11. nucb1 ENSDARG00000054833 2009 1.786 - 0.891 - - - - - - 0.895 nucleobindin 1 [Source:ZFIN;Acc:ZDB-GENE-060825-222]
12. wbscr16 wbscr16 791 1.781 - 0.899 - - 0.882 - - - -
13. mark3 mark3 1375 1.757 - 0.834 - - - - - - 0.923
14. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 1.746 - - - - 0.846 - - - 0.900 regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
15. eif3ja ENSDARG00000012603 6324 1.733 - - - - 0.878 - - - 0.855 eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
16. wu:fb54a03 wu:fb54a03 1722 1.727 - - - - 0.802 - - - 0.925
17. cxxc1 cxxc1 914 1.726 - 0.911 - - 0.815 - - - -
18. si:ch211-198b3.1 si:ch211-198b3.1 765 1.725 - 0.926 - - 0.799 - - - -
19. ftr67 ENSDARG00000098820 611 1.724 - 0.905 - - 0.819 - - - - finTRIM family, member 67 [Source:ZFIN;Acc:ZDB-GENE-060312-27]
20. TP53BP1 ENSDARG00000079000 997 1.718 - 0.816 - - - - - - 0.902 tumor protein p53 binding protein, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3695]
21. BX571949.1 BX571949.1 293 1.716 - - - - 0.821 - - - 0.895
22. ptgs2a ENSDARG00000004539 1207 1.71 - 0.885 - - - - - - 0.825 prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
23. KIAA0355 3250 1.705 - 0.848 - - - - - - 0.857 KIAA0355 ortholog, transcript variant X1
24. cnpy1 ENSDARG00000003757 1132 1.704 - 0.832 - - - - - - 0.872 canopy FGF signaling regulator 1 [Source:ZFIN;Acc:ZDB-GENE-060315-3]
25. ebp ENSDARG00000046098 502 1.701 - - - - 0.840 - - - 0.861 EBP, cholestenol delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-040718-12]
26. uck2b ENSDARG00000022213 1542 1.698 - 0.783 - - - - - - 0.915 uridine-cytidine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5265]
27. fam133b ENSDARG00000013863 5070 1.698 - - - - 0.775 - - - 0.923 family with sequence similarity 133, member B [Source:ZFIN;Acc:ZDB-GENE-060503-229]
28. ube2t ENSDARG00000063285 716 1.697 - - - - 0.802 - - - 0.895 ubiquitin-conjugating enzyme E2T (putative) [Source:ZFIN;Acc:ZDB-GENE-061013-547]
29. ilf3a ENSDARG00000058660, ENSDARG00000116860 3760 1.691 - 0.859 - - - - - - 0.832 interleukin enhancer binding factor 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3151]
30. ncapg ENSDARG00000070109, ENSDARG00000109474, ENSDARG00000113314, ENSDARG00000113623 2338 1.686 - 0.866 - - - - 0.820 - - non-SMC condensin I complex, subunit G [Source:ZFIN;Acc:ZDB-GENE-041111-282]
31. nucks1b ENSDARG00000012777 4468 1.68 - - - - - - 0.790 - 0.890 nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
32. usp5 ENSDARG00000014517, ENSDARG00000114598 1969 1.68 - 0.943 - - - 0.737 - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
33. cdc20 ENSDARG00000100741 3264 1.675 - - - - 0.781 - - - 0.894 cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
34. ATOX1 ENSDARG00000087693 4016 1.667 - 0.898 - - 0.769 - - - - antioxidant 1 copper chaperone [Source:ZFIN;Acc:ZDB-GENE-120720-2]
35. zfand2a ENSDARG00000103511 829 1.663 - 0.842 - - 0.821 - - - - zinc finger, AN1-type domain 2A [Source:ZFIN;Acc:ZDB-GENE-040426-1596]
36. vdac1 ENSDARG00000045132 8051 1.662 - 0.927 - - - 0.735 - - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
37. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.64 - 0.830 - - 0.810 - - - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
38. pcnp ENSDARG00000037713 2754 1.633 - 0.739 - - - - - - 0.894 PEST proteolytic signal containing nuclear protein [Source:ZFIN;Acc:ZDB-GENE-041010-130]
39. si:dkey-226l10.6 ENSDARG00000087483 1651 1.631 - - - - 0.875 - - - 0.756 si:dkey-226l10.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1550]
40. arid1aa ENSDARG00000101710 3644 1.626 - 0.887 - - - - - 0.739 - AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
41. fermt1 ENSDARG00000052652 2394 1.624 - 0.824 - - 0.800 - - - - fermitin family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3264]
42. sel1l ENSDARG00000004581 2246 1.619 - - - - - 0.721 - - 0.898 SEL1L, ERAD E3 ligase adaptor subunit [Source:ZFIN;Acc:ZDB-GENE-041001-122]
43. slbp ENSDARG00000100558 3405 1.619 - 0.856 - - 0.763 - - - - stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
44. gemin8 ENSDARG00000053496, ENSDARG00000115240 1214 1.618 - - - - - - 0.755 - 0.863 gem (nuclear organelle) associated protein 8 [Source:ZFIN;Acc:ZDB-GENE-041114-189]
45. atxn2l ENSDARG00000011597, ENSDARG00000112336 2104 1.618 - 0.905 - - - - 0.713 - - ataxin 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-3246]
46. snoU83B snoU83B 4666 1.616 - - - - 0.779 - - - 0.837
47. atf7b ENSDARG00000055481, ENSDARG00000114492, ENSDARG00000115171 2249 1.611 - - - - 0.821 - 0.790 - - activating transcription factor 7b [Source:ZFIN;Acc:ZDB-GENE-030131-3028]
48. hcls1 ENSDARG00000012729 1547 1.609 - - - - 0.735 - - - 0.874 hematopoietic cell-specific Lyn substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7191]
49. gipc1 ENSDARG00000104483 2913 1.608 - - - - - 0.735 - - 0.873 GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
50. kmt2e ENSDARG00000007523 1851 1.607 - 0.903 - - - - 0.704 - - lysine (K)-specific methyltransferase 2E [Source:ZFIN;Acc:ZDB-GENE-030131-4120]
51. lrp12 ENSDARG00000098845 999 1.606 - - - - 0.857 - - - 0.749 low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]
52. fam60al 2846 1.604 - - - - - 0.749 0.855 - - family with sequence similarity 60, member A, like
53. rfx2 ENSDARG00000013575 1275 1.603 - - - - - - 0.701 - 0.902 regulatory factor X, 2 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-050227-4]
54. wdfy2 ENSDARG00000040453 406 1.603 - - - - - - - 0.710 0.893 WD repeat and FYVE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041111-211]
55. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.599 - 0.816 - - 0.783 - - - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
56. PHLPP1 ENSDARG00000078694 2466 1.597 - - - 0.744 0.853 - - - - PH domain and leucine rich repeat protein phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-131127-271]
57. zgc:114045 ENSDARG00000069334, ENSDARG00000112063 991 1.597 - 0.727 - - - - - - 0.870 zgc:114045 [Source:ZFIN;Acc:ZDB-GENE-050913-119]
58. srrt ENSDARG00000017762, ENSDARG00000114824 2158 1.593 - - - - - 0.823 0.770 - - serrate RNA effector molecule homolog (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-020419-13]
59. gnao1b ENSDARG00000036058, ENSDARG00000112730 1951 1.589 - - - - - 0.794 0.795 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b [Source:ZFIN;Acc:ZDB-GENE-040426-1693]
60. FRMD4A ENSDARG00000042249 2883 1.58 - 0.851 - - - - 0.729 - - FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
61. dut ENSDARG00000106529 3120 1.579 - - - - 0.791 - 0.788 - - deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
62. aspm ENSDARG00000103754 5708 1.577 - - 0.735 - - - 0.842 - - abnormal spindle microtubule assembly [Source:ZFIN;Acc:ZDB-GENE-050208-620]
63. TUBGCP6 1991 1.575 - - - - 0.819 - - - 0.756 tubulin, gamma complex associated protein 6
64. wu:fq41a10 wu:fq41a10 7009 1.571 - - - 0.707 0.864 - - - -
65. si:ch211-106k21.5 ENSDARG00000086052 684 1.57 - 0.830 - - 0.740 - - - - si:ch211-106k21.5 [Source:ZFIN;Acc:ZDB-GENE-070912-7]
66. sdc3 3788 1.57 - - - - - - 0.822 - 0.748 syndecan 3
67. dlgap4a ENSDARG00000060849 1813 1.569 - 0.819 - - - - 0.750 - - discs, large (Drosophila) homolog-associated protein 4a [Source:ZFIN;Acc:ZDB-GENE-080219-51]
68. pak2b ENSDARG00000018476 4331 1.565 - - - - 0.858 - 0.707 - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
69. sap130a ENSDARG00000056924 3156 1.558 - 0.843 - 0.715 - - - - - Sin3A-associated protein a [Source:ZFIN;Acc:ZDB-GENE-070615-5]
70. slc2a8 ENSDARG00000104278 764 1.557 - 0.732 - - 0.825 - - - - solute carrier family 2 (facilitated glucose transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-030829-25]
71. brd3b ENSDARG00000100129 6387 1.555 - - - - - - 0.818 - 0.737 bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
72. abcf2a ENSDARG00000038785 2065 1.555 - - - - 0.850 - 0.705 - - ATP-binding cassette, sub-family F (GCN20), member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8714]
73. leo1 ENSDARG00000055357 1644 1.551 - - - - 0.849 0.702 - - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
74. ctdsp1 ENSDARG00000040674 2828 1.546 - - - - 0.705 - - - 0.841 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-523]
75. tmed7 ENSDARG00000046022 2435 1.544 - 0.768 - - - - 0.776 - - transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
76. znf292b ENSDARG00000043973 3791 1.54 - 0.765 - - - - 0.775 - - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
77. TNPO2 ENSDARG00000042887 2290 1.54 - 0.748 - - 0.792 - - - - transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
78. stt3b ENSDARG00000001890 1836 1.538 - - - - 0.764 - 0.774 - - STT3B, subunit of the oligosaccharyltransferase complex (catalytic) [Source:ZFIN;Acc:ZDB-GENE-030131-2638]
79. nutf2l ENSDARG00000014499 3927 1.534 - - - - - - 0.758 - 0.776 nuclear transport factor 2, like [Source:ZFIN;Acc:ZDB-GENE-020416-1]
80. atp5ia 4773 1.527 - - - - - 0.733 - - 0.794 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Ea
81. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 1.526 - 0.707 - - 0.819 - - - - structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
82. mgst3 mgst3 3982 1.522 - 0.800 - - 0.722 - - - -
83. foxk2 ENSDARG00000030583 2982 1.522 - - - - - 0.769 0.753 - - forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
84. sfxn1 ENSDARG00000019963 1689 1.521 - 0.715 - - 0.806 - - - - sideroflexin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-45]
85. dock7 ENSDARG00000078675 1995 1.52 - 0.792 - - 0.728 - - - - dedicator of cytokinesis 7 [Source:ZFIN;Acc:ZDB-GENE-050302-15]
86. ccnf ENSDARG00000105046 1790 1.52 - - - - 0.805 - 0.715 - - cyclin F [Source:ZFIN;Acc:ZDB-GENE-021030-2]
87. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 1.518 - - - - - - 0.762 - 0.756 immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
88. btg3 ENSDARG00000069065, ENSDARG00000115730 1632 1.516 - - - - 0.807 - 0.709 - - B-cell translocation gene 3 [Source:ZFIN;Acc:ZDB-GENE-031113-19]
89. efhd2 ENSDARG00000055759 7777 1.514 - 0.759 - - 0.755 - - - - EF-hand domain family, member D2 [Source:ZFIN;Acc:ZDB-GENE-060531-152]
90. strada ENSDARG00000037929 1614 1.51 - - - - 0.799 - 0.711 - - ste20-related kinase adaptor alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6482]
91. u2af2b ENSDARG00000011740 6946 1.509 - 0.783 - - - - 0.726 - - U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
92. psat1 ENSDARG00000016733 8084 1.498 - 0.791 - - - - 0.707 - - phosphoserine aminotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5723]
93. TNRC6B ENSDARG00000074161 2464 1.491 - - - - 0.781 - 0.710 - - trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
94. emc6 ENSDARG00000035282 4981 1.49 - - - - - 0.732 - - 0.758 ER membrane protein complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9164]
95. fam53b ENSDARG00000016156 2143 1.487 - - - - 0.722 - 0.765 - - family with sequence similarity 53, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2495]
96. npm1b ENSDARG00000037675 5448 1.486 - - - - - - 0.764 0.722 - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
97. ing4 ENSDARG00000030716 5908 1.484 - - - - 0.766 0.718 - - - inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
98. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.482 - - - - 0.721 - 0.761 - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
99. appbp2 ENSDARG00000007566 1961 1.479 - 0.713 - - - - - - 0.766 amyloid beta precursor protein (cytoplasmic tail) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1715]
100. tet3 ENSDARG00000062646 6672 1.474 - 0.750 - - - - 0.724 - - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]

There are 1457 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA