Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for hmgcra

Gene Name Gene ID Reads Annotation
hmgcra ENSDARG00000052734, ENSDARG00000109336 45 3-hydroxy-3-methylglutaryl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-040401-2]










Genes with expression patterns similar to hmgcra

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hmgcra ENSDARG00000052734, ENSDARG00000109336 45 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 3-hydroxy-3-methylglutaryl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-040401-2]
2. GMIP ENSDARG00000077249 43 2.432 - - - - - 0.951 0.728 0.753 - GEM interacting protein [Source:ZFIN;Acc:ZDB-GENE-130530-823]
3. wu:fe38f03 wu:fe38f03 22 2 - - - - - 1.000 1.000 - -
4. pm20d1.1 ENSDARG00000037551 11 1.904 - - - - - 0.904 1.000 - - peptidase M20 domain containing 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-051120-102]
5. si:ch211-277p15.1 2 1.868 - - - - - 0.868 1.000 - - si:ch211-277p15.1, transcript variant X5
6. kitb ENSDARG00000056133, ENSDARG00000113747 10 1.826 - - 0.826 - - 1.000 - - - v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050916-2]
7. cdc14aa ENSDARG00000013858 18 1.817 - - - - - 1.000 0.817 - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
8. rpap3 ENSDARG00000087962 22 1.773 - - - 0.773 - 1.000 - - - RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]
9. CCDC74B CCDC74B 8 1.716 - - - 0.716 - 1.000 - - -
10. zgc:172131 ENSDARG00000076269 32 1.695 - - - 0.825 - - - - 0.870 zgc:172131 [Source:ZFIN;Acc:ZDB-GENE-080204-47]
11. cdx4 ENSDARG00000036292 1225 1.688 - - - - - - 0.899 0.789 - caudal type homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-980526-330]
12. ctgfb ENSDARG00000104292 69 1.669 - - - - - - - 0.707 0.962 connective tissue growth factor b [Source:ZFIN;Acc:ZDB-GENE-070705-82]
13. znhit3 ENSDARG00000023950 61 1.635 - - - - - 0.837 0.798 - - zinc finger, HIT-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1114]
14. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1.614 - - - 0.773 - 0.841 - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
15. tbata ENSDARG00000067831 193 1.554 - - - - - - 0.747 - 0.807 thymus, brain and testes associated [Source:ZFIN;Acc:ZDB-GENE-121030-4]
16. FUT9 FUT9 91 1.554 - - - 0.713 - - 0.841 - -
17. micall2a ENSDARG00000102366 173 1.548 - - - - - 0.799 - - 0.749 mical-like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5409]
18. ZNF76 ENSDARG00000013279 260 1.501 - - - - - 0.731 - - 0.770 zinc finger protein 76 [Source:ZFIN;Acc:ZDB-GENE-061027-379]
19. blk ENSDARG00000007783 10 1.492 - - - 0.767 - 0.725 - - - BLK proto-oncogene, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-040724-106]
20. spon2b ENSDARG00000002732 115 1.428 - - - - - - - 0.705 0.723 spondin 2b, extracellular matrix protein [Source:ZFIN;Acc:ZDB-GENE-990415-161]
21. CU633740.1 CU633740.1 8 1 - - - - - - 1.000 - -
22. CU481774.2 CU481774.2 1 1 - - - - - - 1.000 - -
23. si:ch211-261n9.2 si:ch211-261n9.2 4 1 - - - - - 1.000 - - -
24. eomesa ENSDARG00000006640 257 1 - - - - - - 1.000 - - eomesodermin homolog a [Source:ZFIN;Acc:ZDB-GENE-001228-1]
25. fam136a ENSDARG00000098401 50 1 - - - - - 1.000 - - - family with sequence similarity 136, member A [Source:ZFIN;Acc:ZDB-GENE-040426-2729]
26. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 1 - - - - - 1.000 - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
27. si:dkey-15j16.3 ENSDARG00000042683 2 1 - - - - - 1.000 - - - si:dkey-15j16.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4680]
28. si:dkey-238o14.8 si:dkey-238o14.8 32 1 - - - - - 1.000 - - -
29. BX324215.3 BX324215.3 12 1 - - - - - 1.000 - - -
30. zbtb47a ENSDARG00000057751 1 1 - - - - - 1.000 - - - zinc finger and BTB domain containing 47a [Source:ZFIN;Acc:ZDB-GENE-081104-121]
31. TMC5 ENSDARG00000013252 22 1 - - - - - 1.000 - - - transmembrane channel like 5 [Source:ZFIN;Acc:ZDB-GENE-120411-6]
32. CU469531.1 ENSDARG00000067872 0 1 - - - - - - 1.000 - -
33. ftr43 ENSDARG00000076106 2 1 - - - - - - 1.000 - - finTRIM family, member 43 [Source:ZFIN;Acc:ZDB-GENE-090507-8]
34. FASN ENSDARG00000087657 18 1 - - - - - 1.000 - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
35. rhof ENSDARG00000054389, ENSDARG00000111798 15 1 - - - - - 1.000 - - - ras homolog family member F [Source:ZFIN;Acc:ZDB-GENE-050522-280]
36. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 1 - - - - - 1.000 - - - zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
37. BX004873.3 BX004873.3 59 1 - - - - - - 1.000 - -
38. zap70 ENSDARG00000015752 1 1 - - - - - 1.000 - - - zeta chain of T cell receptor associated protein kinase 70 [Source:ZFIN;Acc:ZDB-GENE-050522-257]
39. si:ch211-157l15.4 si:ch211-157l15.4 92 1 - - - - - 1.000 - - -
40. wu:fd60c08 wu:fd60c08 35 1 - - - - - - 1.000 - -
41. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - - - - - 1.000 - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
42. si:dkey-258p11.1 si:dkey-258p11.1 48 1 - - - - - - 1.000 - -
43. si:ch211-113a14.26_2 0 1 - - - - - - 1.000 - - si:ch211-113a14.26
44. si:ch211-204a13.1 si:ch211-204a13.1 6 1 - - - - - 1.000 - - -
45. mms22l ENSDARG00000074691 232 1 - - - - - 1.000 - - - MMS22-like, DNA repair protein [Source:ZFIN;Acc:ZDB-GENE-030131-3869]
46. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 1 - - - - - - 1.000 - -
47. si:ch211-255g12.5 si:ch211-255g12.5 7 1 - - - - - - 1.000 - -
48. agrn_1 ENSDARG00000079388, ENSDARG00000110127 47 1 - - - - - - 1.000 - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
49. cyp2k6 ENSDARG00000009874, ENSDARG00000098995 2 1 - - - - - - 1.000 - - cytochrome P450, family 2, subfamily K, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1571]
50. zfp64 ENSDARG00000061147 44 1 - - - - - - 1.000 - - zinc finger protein 64 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-031118-80]
51. EML4 7 1 - - - - - 1.000 - - - echinoderm microtubule associated protein like 4
52. WDR63 ENSDARG00000105093 13 1 - - - - - - 1.000 - - WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
53. CIT_1 CIT_1 6 1 - - - - - - 1.000 - -
54. pcdh2g8 2 1 - - - - - - 1.000 - - protocadherin 2 gamma 8
55. CMA1_4 CMA1_4 23 1 - - - - - - 1.000 - -
56. si:ch211-198c19.3 ENSDARG00000095533 5 1 - - - - - - 1.000 - - si:ch211-198c19.3 [Source:ZFIN;Acc:ZDB-GENE-100922-226]
57. or111-3 ENSDARG00000086633 1 1 - - - - - 1.000 - - - odorant receptor, family D, subfamily 111, member 3 [Source:ZFIN;Acc:ZDB-GENE-010308-17]
58. gtf3c2 ENSDARG00000004574 153 1 - - - - - 1.000 - - - general transcription factor IIIC, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-041014-349]
59. CABZ01015475.1 ENSDARG00000104841 6 1 - - - - - - 1.000 - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
60. BX936386.1 ENSDARG00000097166 5 1 - - - - - 1.000 - - -
61. fermt3b ENSDARG00000030938 17 1 - - - - - 1.000 - - - fermitin family member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1366]
62. CU638695.1 CU638695.1 90 1 - - - - - 1.000 - - -
63. si:dkey-222p3.1 ENSDARG00000071103, ENSDARG00000109854 16 1 - - - - - - 1.000 - - si:dkey-222p3.1 [Source:ZFIN;Acc:ZDB-GENE-050208-374]
64. TBC1D10C ENSDARG00000037408 18 1 - - - - - - 1.000 - - TBC1 domain family, member 10C [Source:ZFIN;Acc:ZDB-GENE-130125-1]
65. rag2 ENSDARG00000052121 15 1 - - - - - - 1.000 - - recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
66. FAM150B FAM150B 29 1 - - - - - 1.000 - - -
67. mstna ENSDARG00000042947 1 1 - - - - - 1.000 - - - myostatin a [Source:ZFIN;Acc:ZDB-GENE-050208-735]
68. polr3b ENSDARG00000062915, ENSDARG00000113895 144 1 - - - - - 1.000 - - - polymerase (RNA) III (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-030131-2887]
69. ZNF70 ZNF70 2 1 - - - - - - 1.000 - -
70. tbc1d22b ENSDARG00000026988 18 1 - - - - - - 1.000 - - TBC1 domain family, member 22B [Source:ZFIN;Acc:ZDB-GENE-091118-28]
71. zgc:113389 zgc:113389 123 1 - - - - - 1.000 - - -
72. CU693369.1 CU693369.1 2 1 - - - - - - 1.000 - -
73. si:dkey-43k4.4 si:dkey-43k4.4 4 1 - - - - - 1.000 - - -
74. si:dkeyp-68b7.5 ENSDARG00000079930 14 1 - - - - - 1.000 - - - si:dkeyp-68b7.5 [Source:ZFIN;Acc:ZDB-GENE-070912-670]
75. lama3 ENSDARG00000071462 1 1 - - - - - 1.000 - - - laminin, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050208-475]
76. si:dkeyp-104f11.5 si:dkeyp-104f11.5 30 1 - - - - - - 1.000 - -
77. CU468142.1 CU468142.1 6 1 - - - - - - 1.000 - -
78. MEX3D MEX3D 293 1 - - - - - - 1.000 - -
79. KCNA2 KCNA2 66 1 - - - - - 1.000 - - -
80. rhoh ENSDARG00000070121 1 1 - - - - - 1.000 - - - ras homolog family member H [Source:ZFIN;Acc:ZDB-GENE-060228-7]
81. BEGAIN BEGAIN 39 1 - - - - - - 1.000 - -
82. itga11b ENSDARG00000007950 17 1 - - - - - 1.000 - - - integrin, alpha 11b [Source:ZFIN;Acc:ZDB-GENE-071009-4]
83. chrna9 ENSDARG00000054680 4 1 - - - - - 1.000 - - - cholinergic receptor, nicotinic, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-090312-63]
84. MYO9B ENSDARG00000078313 97 1 - - - - - - 1.000 - - myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
85. nfatc1 ENSDARG00000036168 16 1 - - - - - - 1.000 - - nuclear factor of activated T cells 1 [Source:ZFIN;Acc:ZDB-GENE-060503-677]
86. si:ch1073-307h15.1 si:ch1073-307h15.1 2 1 - - - - - - 1.000 - -
87. DXO ENSDARG00000036852 16 1 - - - - - 1.000 - - - decapping exoribonuclease [Source:HGNC Symbol;Acc:HGNC:2992]
88. si:ch211-57m13.9 ENSDARG00000095884 10 1 - - - - - - 1.000 - - si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]
89. ENTPD5 ENTPD5 42 1 - - - - - 1.000 - - -
90. si:dkey-46g23.2 ENSDARG00000115817 11 1 - - - - - 1.000 - - - si:dkey-46g23.2 [Source:ZFIN;Acc:ZDB-GENE-070705-476]
91. CU468012.1 ENSDARG00000077794 3 1 - - - - - 1.000 - - -
92. PLCXD1_2 PLCXD1_2 9 1 - - - - - - 1.000 - -
93. drd2a ENSDARG00000056926 40 1 - - - - - - 1.000 - - dopamine receptor D2a [Source:ZFIN;Acc:ZDB-GENE-021119-2]
94. BX511021.2 ENSDARG00000097646 5 1 - - - - - 1.000 - - -
95. CST7 CST7 22 1 - - - - - 1.000 - - -
96. dis3 ENSDARG00000060559, ENSDARG00000110345 92 1 - - - - - 1.000 - - - DIS3 exosome endoribonuclease and 3'-5' exoribonuclease [Source:ZFIN;Acc:ZDB-GENE-080213-3]
97. si:dkey-271j15.3 ENSDARG00000091627 88 1 - - - - - - 1.000 - - si:dkey-271j15.3 [Source:ZFIN;Acc:ZDB-GENE-100921-27]
98. DYDC2 ENSDARG00000101848 2 1 - - - - - 1.000 - - - DPY30 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-121030-3]
99. si:dkey-40j3.1 si:dkey-40j3.1 1 1 - - - - - 1.000 - - -
100. zeb1a ENSDARG00000016788 48 1 - - - - - - 1.000 - - zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124]

There are 1006 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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