Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for hmgcra

Gene Name Gene ID Reads Annotation
hmgcra ENSDARG00000052734, ENSDARG00000109336 45 3-hydroxy-3-methylglutaryl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-040401-2]










Genes with expression patterns similar to hmgcra

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hmgcra ENSDARG00000052734, ENSDARG00000109336 45 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 3-hydroxy-3-methylglutaryl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-040401-2]
2. GMIP ENSDARG00000077249 43 2.432 - - - - - 0.951 0.728 0.753 - GEM interacting protein [Source:ZFIN;Acc:ZDB-GENE-130530-823]
3. wu:fe38f03 wu:fe38f03 22 2 - - - - - 1.000 1.000 - -
4. pm20d1.1 ENSDARG00000037551 11 1.904 - - - - - 0.904 1.000 - - peptidase M20 domain containing 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-051120-102]
5. si:ch211-277p15.1 2 1.868 - - - - - 0.868 1.000 - - si:ch211-277p15.1, transcript variant X5
6. kitb ENSDARG00000056133, ENSDARG00000113747 10 1.826 - - 0.826 - - 1.000 - - - v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050916-2]
7. cdc14aa ENSDARG00000013858 18 1.817 - - - - - 1.000 0.817 - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
8. rpap3 ENSDARG00000087962 22 1.773 - - - 0.773 - 1.000 - - - RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]
9. CCDC74B CCDC74B 8 1.716 - - - 0.716 - 1.000 - - -
10. zgc:172131 ENSDARG00000076269 32 1.695 - - - 0.825 - - - - 0.870 zgc:172131 [Source:ZFIN;Acc:ZDB-GENE-080204-47]
11. cdx4 ENSDARG00000036292 1225 1.688 - - - - - - 0.899 0.789 - caudal type homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-980526-330]
12. ctgfb ENSDARG00000104292 69 1.669 - - - - - - - 0.707 0.962 connective tissue growth factor b [Source:ZFIN;Acc:ZDB-GENE-070705-82]
13. znhit3 ENSDARG00000023950 61 1.635 - - - - - 0.837 0.798 - - zinc finger, HIT-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1114]
14. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1.614 - - - 0.773 - 0.841 - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
15. tbata ENSDARG00000067831 193 1.554 - - - - - - 0.747 - 0.807 thymus, brain and testes associated [Source:ZFIN;Acc:ZDB-GENE-121030-4]
16. FUT9 FUT9 91 1.554 - - - 0.713 - - 0.841 - -
17. micall2a ENSDARG00000102366 173 1.548 - - - - - 0.799 - - 0.749 mical-like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5409]
18. ZNF76 ENSDARG00000013279 260 1.501 - - - - - 0.731 - - 0.770 zinc finger protein 76 [Source:ZFIN;Acc:ZDB-GENE-061027-379]
19. blk ENSDARG00000007783 10 1.492 - - - 0.767 - 0.725 - - - BLK proto-oncogene, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-040724-106]
20. spon2b ENSDARG00000002732 115 1.428 - - - - - - - 0.705 0.723 spondin 2b, extracellular matrix protein [Source:ZFIN;Acc:ZDB-GENE-990415-161]
21. zbtb38 ENSDARG00000100607 17 1 - - - - - - 1.000 - - zinc finger and BTB domain containing 38 [Source:ZFIN;Acc:ZDB-GENE-091204-308]
22. CIT_1 CIT_1 6 1 - - - - - - 1.000 - -
23. NOTCH2NL NOTCH2NL 5 1 - - - - - - 1.000 - -
24. tbc1d22b ENSDARG00000026988 18 1 - - - - - - 1.000 - - TBC1 domain family, member 22B [Source:ZFIN;Acc:ZDB-GENE-091118-28]
25. xrra1 ENSDARG00000089578 18 1 - - - - - - 1.000 - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
26. or103-4 ENSDARG00000003090 1 1 - - - - - 1.000 - - - odorant receptor, family C, subfamily 103, member 4 [Source:ZFIN;Acc:ZDB-GENE-000329-12]
27. CU468012.1 ENSDARG00000077794 3 1 - - - - - 1.000 - - -
28. clock clock 32 1 - - - - - - 1.000 - -
29. RNF222 24 1 - - - - - 1.000 - - - ring finger protein 222
30. CMA1_4 CMA1_4 23 1 - - - - - - 1.000 - -
31. gpr19 ENSDARG00000102226 17 1 - - - - - - 1.000 - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
32. calml4a ENSDARG00000075800 14 1 - - - - - 1.000 - - - calmodulin-like 4a [Source:ZFIN;Acc:ZDB-GENE-081022-9]
33. traf1 ENSDARG00000069482 50 1 - - - - - 1.000 - - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
34. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1 - - - - - - 1.000 - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
35. MAP3K2 ENSDARG00000062884 34 1 - - - - - - 1.000 - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
36. BX936386.1 ENSDARG00000097166 5 1 - - - - - 1.000 - - -
37. si:dkey-126g1.6 si:dkey-126g1.6 1 1 - - - - - 1.000 - - -
38. si:dkey-258f14.3 ENSDARG00000075974 9 1 - - - - - - 1.000 - - si:dkey-258f14.3 [Source:ZFIN;Acc:ZDB-GENE-050809-43]
39. gabrr2a ENSDARG00000052982 21 1 - - - - - 1.000 - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
40. itga11b ENSDARG00000007950 17 1 - - - - - 1.000 - - - integrin, alpha 11b [Source:ZFIN;Acc:ZDB-GENE-071009-4]
41. sp5l ENSDARG00000115868 361 1 - - - - - - 1.000 - - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
42. zap70 ENSDARG00000015752 1 1 - - - - - 1.000 - - - zeta chain of T cell receptor associated protein kinase 70 [Source:ZFIN;Acc:ZDB-GENE-050522-257]
43. ZNF512B ENSDARG00000071055 7 1 - - - - - - 1.000 - - zinc finger protein 512B [Source:HGNC Symbol;Acc:HGNC:29212]
44. igf3 ENSDARG00000058058 19 1 - - - - - 1.000 - - - insulin-like growth factor 3 [Source:ZFIN;Acc:ZDB-GENE-080611-1]
45. ttr ENSDARG00000037191 11 1 - - - - - 1.000 - - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
46. BX005421.3 ENSDARG00000114309 7 1 - - - - - - 1.000 - -
47. polr3b ENSDARG00000062915, ENSDARG00000113895 144 1 - - - - - 1.000 - - - polymerase (RNA) III (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-030131-2887]
48. ciz1a ENSDARG00000089781 20 1 - - - - - - 1.000 - - cdkn1a interacting zinc finger protein 1a [Source:ZFIN;Acc:ZDB-GENE-100922-222]
49. si:dkey-199m13.8 si:dkey-199m13.8 61 1 - - - - - - 1.000 - -
50. CNTNAP3 ENSDARG00000067824 25 1 - - - - - - 1.000 - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
51. cyp2k6 ENSDARG00000009874, ENSDARG00000098995 2 1 - - - - - - 1.000 - - cytochrome P450, family 2, subfamily K, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1571]
52. KCNA2 KCNA2 66 1 - - - - - 1.000 - - -
53. MFAP4_7 MFAP4_7 43 1 - - - - - 1.000 - - -
54. ZNF135_4 ZNF135_4 3 1 - - - - - 1.000 - - -
55. FNDC7_1 FNDC7_1 3 1 - - - - - - 1.000 - -
56. DBNDD1 DBNDD1 43 1 - - - - - - 1.000 - -
57. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 1 - - - - - 1.000 - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
58. rag2 ENSDARG00000052121 15 1 - - - - - - 1.000 - - recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
59. GPR82 GPR82 127 1 - - - - - 1.000 - - -
60. PRR12 PRR12 38 1 - - - - - - 1.000 - -
61. si:ch211-281p14.2 22 1 - - - - - - 1.000 - - si:ch211-281p14.2, transcript variant X2
62. tshb tshb 7 1 - - - - - 1.000 - - -
63. akap1a ENSDARG00000089802 5 1 - - - - - 1.000 - - - A kinase (PRKA) anchor protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5980]
64. cnrip1b ENSDARG00000037337 39 1 - - - - - - 1.000 - - cannabinoid receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-080722-33]
65. tlx1 ENSDARG00000003965 67 1 - - - - - 1.000 - - - T cell leukemia homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-021021-2]
66. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - - - - - 1.000 - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
67. SNORD65_1 SNORD65_1 25 1 - - - - - 1.000 - - -
68. fam228a ENSDARG00000042936, ENSDARG00000114092 30 1 - - - - - - 1.000 - - family with sequence similarity 228, member A [Source:ZFIN;Acc:ZDB-GENE-041014-83]
69. CABZ01036418.1 CABZ01036418.1 0 1 - - - - - - 1.000 - -
70. agrn_1 ENSDARG00000079388, ENSDARG00000110127 47 1 - - - - - - 1.000 - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
71. zgc:195633_1 142 1 - - - - - - 1.000 - - zgc:195633
72. MYO9B ENSDARG00000078313 97 1 - - - - - - 1.000 - - myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
73. wu:fd60c08 wu:fd60c08 35 1 - - - - - - 1.000 - -
74. or111-3 ENSDARG00000086633 1 1 - - - - - 1.000 - - - odorant receptor, family D, subfamily 111, member 3 [Source:ZFIN;Acc:ZDB-GENE-010308-17]
75. si:ch211-255g12.5 si:ch211-255g12.5 7 1 - - - - - - 1.000 - -
76. pnp6 ENSDARG00000040942, ENSDARG00000114753 10 1 - - - - - 1.000 - - - purine nucleoside phosphorylase 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1800]
77. rassf2b ENSDARG00000044044, ENSDARG00000110241 26 1 - - - - - 1.000 - - - Ras association (RalGDS/AF-6) domain family member 2b [Source:ZFIN;Acc:ZDB-GENE-041221-6]
78. tbkbp1 ENSDARG00000061473 24 1 - - - - - - 1.000 - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
79. cntn2 ENSDARG00000000472, ENSDARG00000110222 3 1 - - - - - - 1.000 - - contactin 2 [Source:ZFIN;Acc:ZDB-GENE-990630-12]
80. si:ch1073-525h16.1 si:ch1073-525h16.1 1 1 - - - - - - 1.000 - -
81. racgap1 ENSDARG00000015460 38 1 - - - - - 1.000 - - - Rac GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1917]
82. TBC1D10C ENSDARG00000037408 18 1 - - - - - - 1.000 - - TBC1 domain family, member 10C [Source:ZFIN;Acc:ZDB-GENE-130125-1]
83. uvssa ENSDARG00000100916 73 1 - - - - - 1.000 - - - UV-stimulated scaffold protein A [Source:ZFIN;Acc:ZDB-GENE-091204-111]
84. si:dkey-271j15.3 ENSDARG00000091627 88 1 - - - - - - 1.000 - - si:dkey-271j15.3 [Source:ZFIN;Acc:ZDB-GENE-100921-27]
85. TGFBR3L TGFBR3L 16 1 - - - - - 1.000 - - -
86. FAM150B FAM150B 29 1 - - - - - 1.000 - - -
87. C20H2orf71 C20H2orf71 2 1 - - - - - 1.000 - - -
88. LARS2 ENSDARG00000075337 181 1 - - - - - 1.000 - - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
89. si:ch211-113a14.19_4 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 18 1 - - - - - - 1.000 - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
90. si:dkey-20j10.2 si:dkey-20j10.2 8 1 - - - - - - 1.000 - -
91. ptk2ba ENSDARG00000022841 19 1 - - - - - - 1.000 - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
92. FASN ENSDARG00000087657 18 1 - - - - - 1.000 - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
93. BX649314.1 BX649314.1 3 1 - - - - - 1.000 - - -
94. si:ch211-261n9.2 si:ch211-261n9.2 4 1 - - - - - 1.000 - - -
95. rnasekb ENSDARG00000104458 13 1 - - - - - - 1.000 - - ribonuclease, RNase K b [Source:ZFIN;Acc:ZDB-GENE-060825-160]
96. si:ch1073-307h15.1 si:ch1073-307h15.1 2 1 - - - - - - 1.000 - -
97. itga6l ENSDARG00000056018 1 1 - - - - - - 1.000 - - integrin, alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-040914-57]
98. ANGEL1 ENSDARG00000077567 38 1 - - - - - - 1.000 - - angel homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-111020-12]
99. SNORD65 SNORD65 35 1 - - - - - 1.000 - - -
100. gtf3c2 ENSDARG00000004574 153 1 - - - - - 1.000 - - - general transcription factor IIIC, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-041014-349]

There are 1006 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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