Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for hmgcra

Gene Name Gene ID Reads Annotation
hmgcra ENSDARG00000052734, ENSDARG00000109336 45 3-hydroxy-3-methylglutaryl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-040401-2]










Genes with expression patterns similar to hmgcra

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hmgcra ENSDARG00000052734, ENSDARG00000109336 45 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 3-hydroxy-3-methylglutaryl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-040401-2]
2. GMIP ENSDARG00000077249 43 2.432 - - - - - 0.951 0.728 0.753 - GEM interacting protein [Source:ZFIN;Acc:ZDB-GENE-130530-823]
3. wu:fe38f03 wu:fe38f03 22 2 - - - - - 1.000 1.000 - -
4. pm20d1.1 ENSDARG00000037551 11 1.904 - - - - - 0.904 1.000 - - peptidase M20 domain containing 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-051120-102]
5. si:ch211-277p15.1 2 1.868 - - - - - 0.868 1.000 - - si:ch211-277p15.1, transcript variant X5
6. kitb ENSDARG00000056133, ENSDARG00000113747 10 1.826 - - 0.826 - - 1.000 - - - v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050916-2]
7. cdc14aa ENSDARG00000013858 18 1.817 - - - - - 1.000 0.817 - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
8. rpap3 ENSDARG00000087962 22 1.773 - - - 0.773 - 1.000 - - - RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]
9. CCDC74B CCDC74B 8 1.716 - - - 0.716 - 1.000 - - -
10. zgc:172131 ENSDARG00000076269 32 1.695 - - - 0.825 - - - - 0.870 zgc:172131 [Source:ZFIN;Acc:ZDB-GENE-080204-47]
11. cdx4 ENSDARG00000036292 1225 1.688 - - - - - - 0.899 0.789 - caudal type homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-980526-330]
12. ctgfb ENSDARG00000104292 69 1.669 - - - - - - - 0.707 0.962 connective tissue growth factor b [Source:ZFIN;Acc:ZDB-GENE-070705-82]
13. znhit3 ENSDARG00000023950 61 1.635 - - - - - 0.837 0.798 - - zinc finger, HIT-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1114]
14. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1.614 - - - 0.773 - 0.841 - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
15. tbata ENSDARG00000067831 193 1.554 - - - - - - 0.747 - 0.807 thymus, brain and testes associated [Source:ZFIN;Acc:ZDB-GENE-121030-4]
16. FUT9 FUT9 91 1.554 - - - 0.713 - - 0.841 - -
17. micall2a ENSDARG00000102366 173 1.548 - - - - - 0.799 - - 0.749 mical-like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5409]
18. ZNF76 ENSDARG00000013279 260 1.501 - - - - - 0.731 - - 0.770 zinc finger protein 76 [Source:ZFIN;Acc:ZDB-GENE-061027-379]
19. blk ENSDARG00000007783 10 1.492 - - - 0.767 - 0.725 - - - BLK proto-oncogene, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-040724-106]
20. spon2b ENSDARG00000002732 115 1.428 - - - - - - - 0.705 0.723 spondin 2b, extracellular matrix protein [Source:ZFIN;Acc:ZDB-GENE-990415-161]
21. si:ch211-103n10.5 ENSDARG00000077504, ENSDARG00000116548 8 1 - - - - - 1.000 - - - si:ch211-103n10.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5155]
22. ugt2a6 ENSDARG00000039501 5 1 - - - - - 1.000 - - - UDP glucuronosyltransferase 2 family, polypeptide A6 [Source:ZFIN;Acc:ZDB-GENE-081104-3]
23. si:ch211-113a14.26_2 0 1 - - - - - - 1.000 - - si:ch211-113a14.26
24. eomesa ENSDARG00000006640 257 1 - - - - - - 1.000 - - eomesodermin homolog a [Source:ZFIN;Acc:ZDB-GENE-001228-1]
25. sez6l ENSDARG00000100594 35 1 - - - - - - 1.000 - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
26. drd2a ENSDARG00000056926 40 1 - - - - - - 1.000 - - dopamine receptor D2a [Source:ZFIN;Acc:ZDB-GENE-021119-2]
27. CMA1_4 CMA1_4 23 1 - - - - - - 1.000 - -
28. MSH4 ENSDARG00000075826 37 1 - - - - - 1.000 - - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
29. cyp2x7 ENSDARG00000044002, ENSDARG00000109785 671 1 - - - - - 1.000 - - - cytochrome P450, family 2, subfamily X, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-110114-2]
30. RBM44 RBM44 25 1 - - - - - 1.000 - - -
31. dis3 ENSDARG00000060559, ENSDARG00000110345 92 1 - - - - - 1.000 - - - DIS3 exosome endoribonuclease and 3'-5' exoribonuclease [Source:ZFIN;Acc:ZDB-GENE-080213-3]
32. MEX3D MEX3D 293 1 - - - - - - 1.000 - -
33. si:ch211-57m13.9 ENSDARG00000095884 10 1 - - - - - - 1.000 - - si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]
34. BX649314.1 BX649314.1 3 1 - - - - - 1.000 - - -
35. si:dkeyp-104f11.5 si:dkeyp-104f11.5 30 1 - - - - - - 1.000 - -
36. BX324215.1 BX324215.1 2 1 - - - - - 1.000 - - -
37. CABZ01089980.1 ENSDARG00000117446 16 1 - - - - - - 1.000 - -
38. gabrr2a ENSDARG00000052982 21 1 - - - - - 1.000 - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
39. fabp7b ENSDARG00000034650 397 1 - - - - - - 1.000 - - fatty acid binding protein 7, brain, b [Source:ZFIN;Acc:ZDB-GENE-040614-4]
40. si:dkey-40j3.1 si:dkey-40j3.1 1 1 - - - - - 1.000 - - -
41. cyb561 ENSDARG00000038176 55 1 - - - - - 1.000 - - - cytochrome b561 [Source:ZFIN;Acc:ZDB-GENE-070713-3]
42. zfp64 ENSDARG00000061147 44 1 - - - - - - 1.000 - - zinc finger protein 64 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-031118-80]
43. si:ch211-198c19.3 ENSDARG00000095533 5 1 - - - - - - 1.000 - - si:ch211-198c19.3 [Source:ZFIN;Acc:ZDB-GENE-100922-226]
44. fzd8b ENSDARG00000038569, ENSDARG00000110687 52 1 - - - - - - 1.000 - - frizzled class receptor 8b [Source:ZFIN;Acc:ZDB-GENE-000328-4]
45. NUGGC_3 NUGGC_3 10 1 - - - - - 1.000 - - -
46. si:dkey-15j16.3 ENSDARG00000042683 2 1 - - - - - 1.000 - - - si:dkey-15j16.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4680]
47. adgra1a ENSDARG00000054177 19 1 - - - - - 1.000 - - - adhesion G protein-coupled receptor A1a [Source:ZFIN;Acc:ZDB-GENE-130603-101]
48. si:ch211-71k14.1 ENSDARG00000087061 48 1 - - - - - - 1.000 - - si:ch211-71k14.1 [Source:ZFIN;Acc:ZDB-GENE-110411-283]
49. cyp3c4 ENSDARG00000070021 95 1 - - - - - - 1.000 - - cytochrome P450, family 3, subfamily C, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-060929-96]
50. CAPG CAPG 17 1 - - - - - - 1.000 - -
51. FAM150B FAM150B 29 1 - - - - - 1.000 - - -
52. si:ch211-281p14.2 22 1 - - - - - - 1.000 - - si:ch211-281p14.2, transcript variant X2
53. prl ENSDARG00000037946 80 1 - - - - - - 1.000 - - prolactin [Source:ZFIN;Acc:ZDB-GENE-030513-1]
54. CABZ01036418.1 CABZ01036418.1 0 1 - - - - - - 1.000 - -
55. zdhhc18a ENSDARG00000069807 8 1 - - - - - - 1.000 - - zinc finger, DHHC-type containing 18a [Source:ZFIN;Acc:ZDB-GENE-060929-424]
56. clock clock 32 1 - - - - - - 1.000 - -
57. si:dkey-43k4.4 si:dkey-43k4.4 4 1 - - - - - 1.000 - - -
58. si:dkey-235h8.1 si:dkey-235h8.1 2457 1 - - - - - - 1.000 - -
59. si:ch211-223a21.3 ENSDARG00000104737 28 1 - - - - - - 1.000 - - si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]
60. zgc:174945 ENSDARG00000062057, ENSDARG00000112119 3 1 - - - - - 1.000 - - - zgc:174945 [Source:ZFIN;Acc:ZDB-GENE-080204-80]
61. PRPF6 ENSDARG00000091367 48 1 - - - - - - 1.000 - - PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]
62. si:dkey-258p11.1 si:dkey-258p11.1 48 1 - - - - - - 1.000 - -
63. CABZ01117575.1 CABZ01117575.1 1 1 - - - - - 1.000 - - -
64. FASN ENSDARG00000087657 18 1 - - - - - 1.000 - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
65. TMC5 ENSDARG00000013252 22 1 - - - - - 1.000 - - - transmembrane channel like 5 [Source:ZFIN;Acc:ZDB-GENE-120411-6]
66. BX936443.2 BX936443.2 28 1 - - - - - - 1.000 - -
67. si:ch211-106h4.5 ENSDARG00000095059 1 1 - - - - - 1.000 - - - si:ch211-106h4.5 [Source:ZFIN;Acc:ZDB-GENE-070705-15]
68. cart4 ENSDARG00000070142 55 1 - - - - - - 1.000 - - cocaine- and amphetamine-regulated transcript 4 [Source:ZFIN;Acc:ZDB-GENE-060503-863]
69. rassf2b ENSDARG00000044044, ENSDARG00000110241 26 1 - - - - - 1.000 - - - Ras association (RalGDS/AF-6) domain family member 2b [Source:ZFIN;Acc:ZDB-GENE-041221-6]
70. si:ch211-204a13.1 si:ch211-204a13.1 6 1 - - - - - 1.000 - - -
71. DYDC2 ENSDARG00000101848 2 1 - - - - - 1.000 - - - DPY30 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-121030-3]
72. NOTCH2NL NOTCH2NL 5 1 - - - - - - 1.000 - -
73. si:ch211-113a14.18 ENSDARG00000051735 1253 1 - - - - - - 1.000 - - si:ch211-113a14.18 [Source:ZFIN;Acc:ZDB-GENE-121214-116]
74. rhof ENSDARG00000054389, ENSDARG00000111798 15 1 - - - - - 1.000 - - - ras homolog family member F [Source:ZFIN;Acc:ZDB-GENE-050522-280]
75. polr3b ENSDARG00000062915, ENSDARG00000113895 144 1 - - - - - 1.000 - - - polymerase (RNA) III (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-030131-2887]
76. si:dkey-222p3.1 ENSDARG00000071103, ENSDARG00000109854 16 1 - - - - - - 1.000 - - si:dkey-222p3.1 [Source:ZFIN;Acc:ZDB-GENE-050208-374]
77. crygm3 ENSDARG00000078189, ENSDARG00000112851 6 1 - - - - - 1.000 - - - crystallin, gamma M3 [Source:ZFIN;Acc:ZDB-GENE-050516-6]
78. zbtb38 ENSDARG00000100607 17 1 - - - - - - 1.000 - - zinc finger and BTB domain containing 38 [Source:ZFIN;Acc:ZDB-GENE-091204-308]
79. BX323089.1 BX323089.1 0 1 - - - - - - 1.000 - -
80. si:dkey-46g23.2 ENSDARG00000115817 11 1 - - - - - 1.000 - - - si:dkey-46g23.2 [Source:ZFIN;Acc:ZDB-GENE-070705-476]
81. SNORD14 SNORD14 31 1 - - - - - - 1.000 - -
82. tbr1a ENSDARG00000076259 341 1 - - - - - - 1.000 - - T-box, brain, 1a [Source:ZFIN;Acc:ZDB-GENE-060810-93]
83. KSR1 KSR1 8 1 - - - - - 1.000 - - -
84. mif4gdb ENSDARG00000102578 31 1 - - - - - 1.000 - - - MIF4G domain containing b [Source:ZFIN;Acc:ZDB-GENE-050227-7]
85. si:ch211-255g12.5 si:ch211-255g12.5 7 1 - - - - - - 1.000 - -
86. or111-3 ENSDARG00000086633 1 1 - - - - - 1.000 - - - odorant receptor, family D, subfamily 111, member 3 [Source:ZFIN;Acc:ZDB-GENE-010308-17]
87. si:dkey-33i11.1 ENSDARG00000053027 2 1 - - - - - 1.000 - - - si:dkey-33i11.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4630]
88. CST7 CST7 22 1 - - - - - 1.000 - - -
89. zgc:56231 ENSDARG00000010332 0 1 - - - - - - 1.000 - - zgc:56231 [Source:ZFIN;Acc:ZDB-GENE-040426-1914]
90. si:dkey-57k2.6 ENSDARG00000095608 14 1 - - - - - 1.000 - - - si:dkey-57k2.6 [Source:ZFIN;Acc:ZDB-GENE-070912-558]
91. cnrip1b ENSDARG00000037337 39 1 - - - - - - 1.000 - - cannabinoid receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-080722-33]
92. BEGAIN BEGAIN 39 1 - - - - - - 1.000 - -
93. ptk2ba ENSDARG00000022841 19 1 - - - - - - 1.000 - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
94. si:ch1073-525h16.1 si:ch1073-525h16.1 1 1 - - - - - - 1.000 - -
95. SOWAHD ENSDARG00000087152, ENSDARG00000109642 24 1 - - - - - 1.000 - - - sosondowah ankyrin repeat domain family d [Source:ZFIN;Acc:ZDB-GENE-120215-42]
96. rag2 ENSDARG00000052121 15 1 - - - - - - 1.000 - - recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
97. CU459094.1 ENSDARG00000110517 17 1 - - - - - - 1.000 - - uncharacterized LOC108191666 [Source:NCBI gene;Acc:108191666]
98. bckdhb ENSDARG00000014676 17 1 - - - - - 1.000 - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
99. dao.3 ENSDARG00000035601 15 1 - - - - - 1.000 - - - D-amino-acid oxidase, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1894]
100. ZNF135_4 ZNF135_4 3 1 - - - - - 1.000 - - -

There are 1006 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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