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Results for hmgb2b

Gene Name Gene ID Reads Annotation
hmgb2b ENSDARG00000053990 11519 high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]










Genes with expression patterns similar to hmgb2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hmgb2b ENSDARG00000053990 11519 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
2. sumo3a ENSDARG00000028119 13447 4.072 0.843 - - - 0.827 - 0.819 0.707 0.876 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
3. stmn1a ENSDARG00000004169 21169 3.412 0.827 - - 0.973 - - 0.785 - 0.827 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
4. dla ENSDARG00000010791 9281 3.347 0.739 - - 0.972 - - 0.773 - 0.863 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
5. hmgb3a ENSDARG00000056725 15668 3.336 0.788 0.813 - - - - 0.914 - 0.821 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
6. khsrp ENSDARG00000026489 15738 3.287 0.875 - - - - - 0.849 0.762 0.801 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
7. rrm1 ENSDARG00000014017 7296 3.224 0.841 - 0.702 - - - 0.876 - 0.805 ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
8. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 3.039 0.709 - - - 0.728 - 0.717 - 0.885 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
9. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 2.646 0.822 - - - - 0.987 - - 0.837 cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
10. snrpc ENSDARG00000009871 9567 2.639 - - - - - 0.968 0.781 - 0.890 small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
11. hnrnpub ENSDARG00000004735 16496 2.617 0.780 - - - - - 0.904 - 0.933 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
12. whsc1l1 8544 2.581 - - 0.871 - - - 0.857 - 0.853 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
13. HNRNPAB HNRNPAB 22267 2.561 - - - - - - 0.929 0.763 0.869
14. creb1a ENSDARG00000053586 5068 2.555 - - - 0.945 - - 0.731 - 0.879 cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
15. parp1 ENSDARG00000019529 6787 2.548 0.724 - - - - 0.973 - - 0.851 poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
16. wu:fc51f04 wu:fc51f04 7074 2.542 - - - - 0.706 0.984 - - 0.852
17. PSIP1 PSIP1 5252 2.539 - - 0.829 - - 0.972 0.738 - -
18. usp7 ENSDARG00000073710 7017 2.536 - - - - 0.902 - 0.805 - 0.829 ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
19. hoxa3a ENSDARG00000103862 2239 2.535 0.763 - - - - 0.968 0.804 - - homeobox A3a [Source:ZFIN;Acc:ZDB-GENE-000823-3]
20. tmpob ENSDARG00000022978 8121 2.533 0.812 - - - - - 0.854 - 0.867 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
21. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.525 - - - - - - 0.877 0.720 0.928 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
22. prmt1 ENSDARG00000010246 11311 2.491 0.728 - - 0.960 - - 0.803 - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
23. SNRPG ENSDARG00000099667 18697 2.482 - 0.722 - - - - 0.860 - 0.900 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
24. FP016176.1 FP016176.1 7030 2.445 - - 0.831 - - - 0.865 - 0.749
25. marcksa ENSDARG00000004049 2518 2.442 - - - - 0.716 - 0.824 - 0.902 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
26. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 2.44 - - - 0.965 - - 0.771 - 0.704 chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
27. kif22 ENSDARG00000102624 3694 2.439 - - - - 0.704 - 0.893 - 0.842 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
28. wdr5 ENSDARG00000016903 4834 2.435 0.725 - - - - 0.972 - - 0.738 WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082]
29. tmem35 ENSDARG00000052567 5685 2.421 0.760 - - - - - 0.779 - 0.882 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
30. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 2.415 0.726 - - 0.948 - - 0.741 - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
31. wu:fb17g07 wu:fb17g07 10567 2.406 - - - 0.956 0.721 - 0.729 - -
32. h3f3a 66671 2.404 0.771 - - - - - 0.922 0.711 - H3 histone, family 3A, transcript variant X1
33. tox ENSDARG00000032317 9126 2.402 0.730 - - - - - 0.800 - 0.872 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
34. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 2.395 - - - - 0.715 - 0.821 - 0.859 family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
35. sin3b ENSDARG00000062472 2025 2.389 - - - - 0.719 - 0.815 - 0.855 SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
36. tuba1c ENSDARG00000055216 8384 2.377 0.766 - - - - - 0.746 - 0.865 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
37. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.372 0.744 - - - - - 0.767 - 0.861 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
38. srsf11 ENSDARG00000098574 12801 2.371 - - 0.791 - - - 0.846 - 0.734 serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
39. fam60al 2846 2.368 0.736 - - - - - 0.865 - 0.767 family with sequence similarity 60, member A, like
40. nucks1a ENSDARG00000078473 28285 2.358 - - - 0.918 0.705 - - 0.735 - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
41. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.358 0.762 - - - - - 0.793 - 0.803 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
42. C24H17orf96 C24H17orf96 1538 2.357 - - - - 0.737 - 0.795 - 0.825
43. ELOVL4 ELOVL4 3026 2.347 0.765 - - - - - 0.748 - 0.834
44. stmn1b ENSDARG00000033655 9491 2.346 0.756 - - - - - 0.769 0.821 - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
45. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 2.341 - - 0.703 - - - - 0.727 0.911 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
46. Sep-06 Sep-06 5465 2.34 - 0.806 - - - - 0.772 - 0.762
47. h3f3b.1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 50840 2.338 - - - - 0.727 0.899 0.712 - - H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
48. fzd3a ENSDARG00000021664 1958 2.331 0.714 - - - - - 0.779 - 0.838 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
49. sdc3 3788 2.326 0.764 0.721 - - - - 0.841 - - syndecan 3
50. AGO1 ENSDARG00000092644 4521 2.325 0.756 - - - - - 0.799 - 0.770 argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
51. C8H1orf106 C8H1orf106 2690 2.324 0.752 - - - - - 0.744 - 0.828
52. atp6v0cb ENSDARG00000036577 3472 2.322 0.807 - - - - - 0.792 - 0.723 ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
53. hdac1 ENSDARG00000015427 19804 2.32 0.748 - - - - - - 0.745 0.827 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
54. nova2 ENSDARG00000017673 7685 2.315 0.780 - - - - - 0.782 - 0.753 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
55. myef2 ENSDARG00000059398 6050 2.315 - 0.744 - - - - 0.747 - 0.824 myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
56. dld ENSDARG00000020219 4928 2.312 0.753 - - - - - 0.792 - 0.767 deltaD [Source:ZFIN;Acc:ZDB-GENE-990415-47]
57. clvs2 ENSDARG00000053122 1390 2.308 0.739 - - - - - 0.758 - 0.811 clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
58. sox3 ENSDARG00000053569 12016 2.305 0.749 - - - - - - 0.768 0.788 SRY (sex determining region Y)-box 3 [Source:ZFIN;Acc:ZDB-GENE-980526-333]
59. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.303 0.756 - - - - - 0.756 - 0.791 SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
60. dpysl5a ENSDARG00000011141 1827 2.302 0.707 - - - - - 0.727 - 0.868 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
61. MKI67 ENSDARG00000091150 11038 2.3 0.766 - - - - - 0.784 - 0.750 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
62. gnao1a ENSDARG00000016676 8184 2.298 0.719 - - - - - 0.822 - 0.757 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
63. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.281 0.741 - - - 0.718 - 0.822 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
64. UBE2QL1 ENSDARG00000079276 3474 2.273 0.777 - - - 0.702 - 0.794 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
65. g3bp1 ENSDARG00000017741 7622 2.264 - 0.717 - - - - 0.759 - 0.788 GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
66. gap43 ENSDARG00000099744 4114 2.259 0.702 - - - - - 0.742 - 0.815 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
67. nbeaa ENSDARG00000070080 862 2.258 0.721 - - - - - 0.714 - 0.823 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
68. ctnnd2b ENSDARG00000003779 964 2.249 0.724 - - - - - 0.779 - 0.746 catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
69. pop7 ENSDARG00000036394 1684 2.247 0.734 - - - - - 0.719 - 0.794 POP7 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-041010-88]
70. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 2.243 - - - - - - 0.787 0.704 0.752 contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
71. vdac1 ENSDARG00000045132 8051 2.239 0.727 - - 0.785 - - 0.727 - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
72. psmb7 ENSDARG00000037962 11542 2.236 0.713 - - - - - 0.734 - 0.789 proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
73. negr1 ENSDARG00000021607 1051 2.228 0.740 - - - - - 0.743 - 0.745 neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
74. lgi1a ENSDARG00000020493 1218 2.211 - - - - 0.714 - 0.769 - 0.728 leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
75. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 2.204 0.752 - - - - - 0.708 - 0.744 cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
76. tshz1 ENSDARG00000005026 1948 2.203 0.717 0.718 - - - - 0.768 - - teashirt zinc finger homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030820-3]
77. ANKRD11 ENSDARG00000051886 10024 2.199 0.731 0.706 - - - - 0.762 - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
78. fen1 ENSDARG00000011404 3358 2.188 - - - - 0.716 - 0.738 - 0.734 flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
79. khdrbs1a ENSDARG00000052856 53666 2.18 0.757 - - - - 0.710 - 0.713 - KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
80. nxf1 ENSDARG00000055076 3251 2.163 - - - - 0.705 - 0.707 - 0.751 nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
81. CABZ01072954.1 CABZ01072954.1 2330 2.153 0.706 0.737 - - - - 0.710 - -
82. gabpa ENSDARG00000069289, ENSDARG00000110923 1536 2.144 0.720 - - - 0.720 - - - 0.704 GA binding protein transcription factor subunit alpha [Source:ZFIN;Acc:ZDB-GENE-011010-2]
83. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 1.907 - - - 0.930 - 0.977 - - - ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
84. hnrpdl 14288 1.896 - - - 0.968 - 0.928 - - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
85. nt5c2b ENSDARG00000058231 3822 1.881 - - - 0.927 - 0.954 - - - 5'-nucleotidase, cytosolic IIb [Source:ZFIN;Acc:ZDB-GENE-061013-522]
86. rps17 ENSDARG00000104011 27028 1.857 - - - 0.897 - 0.960 - - - ribosomal protein S17 [Source:ZFIN;Acc:ZDB-GENE-040426-1852]
87. mapre1b ENSDARG00000002659 9119 1.812 - - - 0.949 - - - - 0.863 microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
88. lmnb1 ENSDARG00000044299 9817 1.81 - - - 0.967 - - 0.843 - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
89. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.804 - - - - - - 0.878 - 0.926 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
90. top1l ENSDARG00000070545 40529 1.787 - - - - - 0.861 0.926 - - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
91. pdcd4a ENSDARG00000021702 7293 1.771 - 0.855 - 0.916 - - - - - programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
92. mllt10 ENSDARG00000045401 7557 1.756 - - - 0.959 - - 0.797 - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
93. smarca5 ENSDARG00000052348 15433 1.756 - - - - - - 0.861 - 0.895 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
94. eif1axb ENSDARG00000057912, ENSDARG00000111310 26395 1.75 - - - 0.776 - 0.974 - - - eukaryotic translation initiation factor 1A X-linked b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
95. nucks1b ENSDARG00000012777 4468 1.747 - - - 0.962 - - 0.785 - - nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
96. psmb4 ENSDARG00000054696 8100 1.743 - - - - - 0.976 0.767 - - proteasome subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-050417-333]
97. rbb4 rbb4 15541 1.737 - - - - - - 0.877 - 0.860
98. uba1 ENSDARG00000037559 11579 1.735 - - 0.875 - - - 0.860 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
99. SV2A ENSDARG00000059945 1278 1.731 - - - - - 0.973 - - 0.758 synaptic vesicle glycoprotein 2A [Source:ZFIN;Acc:ZDB-GENE-131001-1]
100. hnrpl 6412 1.73 - - - - - - 0.846 - 0.884 heterogeneous nuclear ribonucleoprotein L, transcript variant X1

There are 1994 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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