Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for hmga1b

Gene Name Gene ID Reads Annotation
hmga1b ENSDARG00000070951 377 high mobility group AT-hook 1b [Source:ZFIN;Acc:ZDB-GENE-061013-204]










Genes with expression patterns similar to hmga1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hmga1b ENSDARG00000070951 377 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 high mobility group AT-hook 1b [Source:ZFIN;Acc:ZDB-GENE-061013-204]
2. si:ch211-152f6.6 si:ch211-152f6.6 278 2.382 - - - - - 0.880 - 0.763 0.739
3. MCAM MCAM 1765 2.348 0.758 - - - - 0.849 - - 0.741
4. marcksa ENSDARG00000004049 2518 2.28 - - - - - 0.790 0.710 - 0.780 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
5. zgc:136791 97 1.814 0.908 0.906 - - - - - - - zgc:136791, transcript variant X3
6. znf804a ENSDARG00000027079 121 1.794 - 0.897 - - - 0.897 - - - zinc finger protein 804A [Source:ZFIN;Acc:ZDB-GENE-070912-632]
7. cdkn2d ENSDARG00000094176 190 1.779 - 0.873 - - - 0.906 - - - cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-110316-1]
8. dtnbp1b ENSDARG00000055206 64 1.767 - 0.844 - - - 0.923 - - - dystrobrevin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-889]
9. si:dkey-228i19.32 si:dkey-228i19.32 9 1.752 - 0.847 - - - 0.905 - - -
10. nxt2 ENSDARG00000061527, ENSDARG00000113656 277 1.731 0.790 0.941 - - - - - - - nuclear transport factor 2-like export factor 2 [Source:ZFIN;Acc:ZDB-GENE-050521-1]
11. reep2 ENSDARG00000031382, ENSDARG00000112622 563 1.711 - - - - - 0.814 0.897 - - receptor accessory protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-125]
12. ppp1r14ab ENSDARG00000017710, ENSDARG00000110779 3296 1.705 - - - - - 0.914 0.791 - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ab [Source:ZFIN;Acc:ZDB-GENE-040426-1783]
13. chrna5 ENSDARG00000003420 137 1.696 - - - - - 0.801 0.895 - - cholinergic receptor, nicotinic, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-050417-440]
14. PRRT2 ENSDARG00000103588 913 1.692 - - - - - 0.904 0.788 - - proline-rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-121210-3]
15. akap17a ENSDARG00000104768 275 1.682 0.852 0.830 - - - - - - - A kinase (PRKA) anchor protein 17A [Source:ZFIN;Acc:ZDB-GENE-040426-1460]
16. si:dkey-199m13.9 si:dkey-199m13.9 20 1.681 - 0.847 - - - 0.834 - - -
17. KCNA1 KCNA1 268 1.68 - 0.911 - - - 0.769 - - -
18. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 1.678 - 0.875 - - - 0.803 - - - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
19. rheb ENSDARG00000090213 1432 1.671 - - - - - 0.939 0.732 - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
20. evx2 ENSDARG00000059255 317 1.67 - 0.847 - - - 0.823 - - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
21. phactr3a ENSDARG00000058243 150 1.653 - - - - - 0.906 - 0.747 - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
22. lgi1a ENSDARG00000020493 1218 1.652 - 0.821 - - - 0.831 - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
23. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 1.646 - - - - - 0.929 0.717 - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
24. scn2b ENSDARG00000101713 796 1.645 - - - - - 0.940 0.705 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
25. si:dkey-227h16.2 si:dkey-227h16.2 98 1.644 - 0.884 - - - 0.760 - - -
26. gabrg2 ENSDARG00000053665 434 1.639 - - - - - 0.904 - - 0.735 gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
27. exosc7 ENSDARG00000100060 190 1.636 0.850 - - - - 0.786 - - - exosome component 7 [Source:ZFIN;Acc:ZDB-GENE-050417-47]
28. RAB33A ENSDARG00000057394, ENSDARG00000115279 380 1.629 - - - - - 0.782 0.847 - - RAB33A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-283]
29. insm1b ENSDARG00000053301 2032 1.627 - - - - - 0.904 - - 0.723 insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
30. eml1 ENSDARG00000042840 569 1.617 - 0.726 - - - - 0.891 - - echinoderm microtubule associated protein like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-156]
31. dync1i1 ENSDARG00000060948 554 1.617 - - - - - 0.892 - - 0.725 dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
32. BX470149.1 BX470149.1 235 1.608 0.860 - - - - 0.748 - - -
33. inab ENSDARG00000053248 3239 1.608 - - - - - 0.869 - - 0.739 internexin neuronal intermediate filament protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-83]
34. st3gal2 ENSDARG00000112898 370 1.607 - - - - - 0.751 - 0.856 - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050419-181]
35. ENSDARG00000023499 ENSDARG00000023499 395 1.606 0.901 - - - - - - 0.705 -
36. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 1.597 - - - - - 0.811 - 0.786 - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
37. her4.1 ENSDARG00000056732 1264 1.595 - - - - - 0.777 0.818 - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
38. smarcc1a ENSDARG00000017397 2957 1.592 - - - - - - 0.820 0.772 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1a [Source:ZFIN;Acc:ZDB-GENE-080514-3]
39. fam188a 275 1.587 0.851 - - - - 0.736 - - - family with sequence similarity 188, member A
40. zgc:113019 ENSDARG00000099743 994 1.584 0.808 0.776 - - - - - - - zgc:113019 [Source:ZFIN;Acc:ZDB-GENE-050417-449]
41. rbm4.1 ENSDARG00000036386 625 1.584 - - - - - 0.865 - - 0.719 RNA binding motif protein 4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3902]
42. sept5a ENSDARG00000013843 1206 1.582 - - - - - 0.781 - 0.801 - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
43. pax3a ENSDARG00000010192 626 1.581 - 0.865 - - - - - 0.716 - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
44. mark4a ENSDARG00000023914, ENSDARG00000112220 445 1.58 - - - - - 0.862 - 0.718 - MAP/microtubule affinity-regulating kinase 4a [Source:ZFIN;Acc:ZDB-GENE-060531-156]
45. pcdh19 ENSDARG00000034344 2378 1.578 - - - - - 0.800 - - 0.778 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
46. tmcc2 ENSDARG00000046007 148 1.577 - 0.811 - - - 0.766 - - - transmembrane and coiled-coil domain family 2 [Source:ZFIN;Acc:ZDB-GENE-091202-2]
47. prr14 ENSDARG00000089232 495 1.575 - 0.844 - - - - 0.731 - - proline rich 14 [Source:ZFIN;Acc:ZDB-GENE-030131-3785]
48. celf4 ENSDARG00000070045 1537 1.572 - - - - - 0.871 0.701 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
49. ATP6AP1L_1 ATP6AP1L_1 508 1.566 - - - - - 0.855 - 0.711 -
50. stmn4l ENSDARG00000043932 654 1.557 - - - - - 0.745 - 0.812 - stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
51. usp42 ENSDARG00000077300 926 1.555 - - - - - - 0.784 0.771 - ubiquitin specific peptidase 42 [Source:ZFIN;Acc:ZDB-GENE-030131-5739]
52. calm1a ENSDARG00000021811 4791 1.552 - - - - - 0.842 0.710 - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
53. fgf12b ENSDARG00000113525 261 1.547 - 0.826 - - - 0.721 - - - fibroblast growth factor 12b [Source:ZFIN;Acc:ZDB-GENE-060825-134]
54. runx1t1 ENSDARG00000003680 633 1.547 - - - - - 0.833 0.714 - - runt-related transcription factor 1; translocated to, 1 (cyclin D-related) [Source:ZFIN;Acc:ZDB-GENE-060929-164]
55. cacng3b ENSDARG00000076401 91 1.546 - - - - - 0.844 0.702 - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
56. pom121 ENSDARG00000055113 1063 1.543 0.805 - - - - - - 0.738 - POM121 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-6557]
57. UBE2QL1 ENSDARG00000079276 3474 1.543 - - - - - 0.814 0.729 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
58. igsf9ba ENSDARG00000033845 158 1.543 - 0.719 - - - 0.824 - - - immunoglobulin superfamily, member 9Ba [Source:ZFIN;Acc:ZDB-GENE-060503-729]
59. hoxa5a ENSDARG00000102501 1667 1.539 - - - - - 0.730 0.809 - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
60. snap25a ENSDARG00000020609 4537 1.539 - - - - - 0.771 0.768 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
61. dnaja2l ENSDARG00000010745 2367 1.537 - - - - - 0.722 0.815 - - DnaJ (Hsp40) homolog, subfamily A, member 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-2884]
62. C21H5orf24 C21H5orf24 333 1.53 - - - - - 0.779 - 0.751 -
63. ARHGAP22 ENSDARG00000076434 1406 1.525 - - - - - 0.824 - - 0.701 Rho GTPase activating protein 22 [Source:HGNC Symbol;Acc:HGNC:30320]
64. CR847998.1 ENSDARG00000104784 518 1.52 - - - - - 0.783 - 0.737 -
65. sall3a ENSDARG00000079613 257 1.519 - - - - - 0.761 - 0.758 - spalt-like transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-020228-4]
66. cdc16 ENSDARG00000055470, ENSDARG00000111307 347 1.518 - 0.809 - - - - 0.709 - - cell division cycle 16 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-051113-132]
67. hmgb3a ENSDARG00000056725 15668 1.512 - - - - - 0.770 0.742 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
68. AKT3 AKT3 1729 1.51 - 0.778 - - - 0.732 - - -
69. fzd3a ENSDARG00000021664 1958 1.507 - - - - - 0.792 - - 0.715 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
70. ptprsb 1085 1.503 - - - - - 0.785 - 0.718 - protein tyrosine phosphatase, receptor type, s, b
71. srek1 ENSDARG00000009764, ENSDARG00000114600 319 1.502 - 0.782 - - - 0.720 - - - splicing regulatory glutamine/lysine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-040801-132]
72. tox ENSDARG00000032317 9126 1.501 - - - - - - 0.770 - 0.731 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
73. adnpb ENSDARG00000074293 796 1.498 0.794 - - - - 0.704 - - - activity-dependent neuroprotector homeobox b [Source:ZFIN;Acc:ZDB-GENE-030131-6385]
74. map7d2b ENSDARG00000045316 702 1.496 - - - - - 0.792 0.704 - - MAP7 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091118-82]
75. SMG9 ENSDARG00000076627 525 1.494 - 0.788 - - - - - 0.706 - smg9 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9385]
76. hoxa9b ENSDARG00000056819 3081 1.489 - - - - - 0.780 0.709 - - homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
77. celf3a ENSDARG00000034668 2432 1.488 - - - - - 0.733 - - 0.755 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
78. pou3f2a ENSDARG00000070220 817 1.488 - - - - - 0.775 - - 0.713 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
79. cuedc1a ENSDARG00000068716 232 1.485 - - - - - 0.769 0.716 - - CUE domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061027-344]
80. tuba1c ENSDARG00000055216 8384 1.485 - - - - - 0.769 - - 0.716 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
81. IGLON5 ENSDARG00000022176 1353 1.482 0.707 - - - - 0.775 - - - IgLON family member 5 [Source:HGNC Symbol;Acc:HGNC:34550]
82. b3gat2 ENSDARG00000030733 348 1.478 - - - - - 0.745 - 0.733 - beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:ZFIN;Acc:ZDB-GENE-040801-191]
83. slc32a1 ENSDARG00000059775 1092 1.478 - - - - - 0.757 0.721 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
84. TNRC6C_2 TNRC6C_2 2444 1.478 - - - - - 0.712 0.766 - -
85. rab3c ENSDARG00000014462, ENSDARG00000042803 508 1.477 - - - - - 0.746 0.731 - - RAB3C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-263]
86. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.471 - - - - - 0.765 - 0.706 - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
87. Sep-03 Sep-03 1124 1.47 - - - - - 0.752 - - 0.718
88. kifap3a ENSDARG00000008639 721 1.47 - 0.746 - - - - - 0.724 - kinesin-associated protein 3a [Source:ZFIN;Acc:ZDB-GENE-040912-74]
89. sall1a ENSDARG00000074319, ENSDARG00000111696 1486 1.467 - - - - - 0.701 0.766 - - spalt-like transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-020228-2]
90. LDLRAD4 LDLRAD4 1237 1.463 - - - - - - 0.724 - 0.739
91. znf770 ENSDARG00000070786 796 1.455 - - - - - 0.705 - 0.750 - zinc finger protein 770 [Source:ZFIN;Acc:ZDB-GENE-030131-1505]
92. aldocb ENSDARG00000019702 2111 1.449 - - - - - 0.715 0.734 - - aldolase C, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-030821-1]
93. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 1.449 - - - - - - 0.726 - 0.723 family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
94. rtn1b ENSDARG00000021143 1682 1.449 - - - - - - 0.709 0.740 - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
95. AL844567.1 AL844567.1 1605 1.447 0.704 - - - - 0.743 - - -
96. nmnat2 ENSDARG00000004580 370 1.444 - - - - - 0.718 - 0.726 - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
97. RPH3A_1 RPH3A_1 399 1.438 - - - - - 0.719 - 0.719 -
98. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 1.436 - - - - - 0.710 0.726 - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
99. sin3b ENSDARG00000062472 2025 1.435 - - - - - 0.701 - - 0.734 SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
100. SLC22A23_1 SLC22A23_1 308 1.434 - 0.734 - - - - - - 0.700

There are 1542 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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