Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for hmg20b

Gene Name Gene ID Reads Annotation
hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]










Genes with expression patterns similar to hmg20b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
2. eif3ja ENSDARG00000012603 6324 2.568 - 0.708 0.956 - 0.904 - - - - eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
3. rpf2 ENSDARG00000043960 2719 2.557 - 0.778 0.966 0.813 - - - - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
4. CU467832.1 CU467832.1 635 2.549 - 0.721 0.989 - - 0.839 - - -
5. lpl ENSDARG00000087697 2578 2.457 - 0.712 0.955 - 0.790 - - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
6. ankib1b ENSDARG00000076829 677 2.415 0.784 0.779 - 0.852 - - - - - ankyrin repeat and IBR domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-100920-6]
7. rae1 ENSDARG00000007196, ENSDARG00000113905 3321 2.344 - - - 0.812 0.780 0.752 - - - ribonucleic acid export 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1029]
8. CR548630.1 CR548630.1 3301 1.976 - - 0.976 - - - 1.000 - -
9. lrp12 ENSDARG00000098845 999 1.877 - - 0.991 - 0.886 - - - - low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]
10. rela ENSDARG00000098696 889 1.867 - - 0.976 0.891 - - - - - v-rel avian reticuloendotheliosis viral oncogene homolog A [Source:ZFIN;Acc:ZDB-GENE-040825-4]
11. smg5 ENSDARG00000041481 1286 1.853 - - 0.991 - 0.862 - - - - SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
12. tbx2a ENSDARG00000018025, ENSDARG00000109541 1183 1.846 - - 0.986 - 0.860 - - - - T-box 2a [Source:ZFIN;Acc:ZDB-GENE-990917-4]
13. eva1ba ENSDARG00000102701 1480 1.846 - - 0.980 - 0.866 - - - - eva-1 homolog Ba (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-8941]
14. si:ch211-238e22.1 si:ch211-238e22.1 1032 1.822 - 0.838 0.984 - - - - - -
15. nrg1 ENSDARG00000104314 1081 1.808 - - 0.989 0.819 - - - - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
16. SGPP1 ENSDARG00000060534 1802 1.804 0.804 - - - - - 1.000 - - sphingosine-1-phosphate phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-090319-2]
17. tm2d3 ENSDARG00000076618 2310 1.8 - - 0.968 - 0.832 - - - - TM2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070620-20]
18. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 1.799 - - 0.984 0.815 - - - - - zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
19. LPHN2 LPHN2 1971 1.797 - - 0.972 - 0.825 - - - -
20. vrk1 ENSDARG00000018006 1759 1.786 0.811 - 0.975 - - - - - - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
21. flot2a ENSDARG00000004830 5276 1.777 0.791 - 0.986 - - - - - - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
22. dek ENSDARG00000070108 2262 1.773 - - 0.915 - 0.858 - - - - DEK proto-oncogene [Source:ZFIN;Acc:ZDB-GENE-060512-191]
23. tmem248 ENSDARG00000018825 1560 1.771 - 0.781 0.990 - - - - - - transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
24. TMEM261 TMEM261 6529 1.771 0.790 - 0.981 - - - - - -
25. si:dkey-256i11.1 si:dkey-256i11.1 3373 1.756 - - 0.955 - - 0.801 - - -
26. fam133b ENSDARG00000013863 5070 1.751 - - - - 0.751 - 1.000 - - family with sequence similarity 133, member B [Source:ZFIN;Acc:ZDB-GENE-060503-229]
27. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 1.745 - 0.763 0.982 - - - - - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
28. vbp1 ENSDARG00000030241 10619 1.744 - 0.745 - - - - 0.999 - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
29. fignl1 ENSDARG00000016427 636 1.743 - - 0.989 - - 0.754 - - - fidgetin-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1862]
30. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 1.736 0.752 - 0.984 - - - - - - APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
31. hnrpkl ENSDARG00000007034 4660 1.734 - 0.783 0.951 - - - - - - heterogeneous nuclear ribonucleoprotein K, like [Source:ZFIN;Acc:ZDB-GENE-040426-1923]
32. gdi1 ENSDARG00000056122 4106 1.732 - - 0.969 - 0.763 - - - - GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
33. max ENSDARG00000024844 6035 1.731 - - 0.896 - 0.835 - - - - myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
34. rnf113a ENSDARG00000037930 849 1.73 - - 0.981 0.749 - - - - - ring finger protein 113A [Source:ZFIN;Acc:ZDB-GENE-040825-1]
35. phc2b_1 ENSDARG00000013224 1316 1.729 - - 0.989 - - 0.740 - - - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
36. actr10 ENSDARG00000038432 1598 1.725 - - 0.984 - - 0.741 - - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
37. yy1a ENSDARG00000042796 4982 1.722 - 0.765 0.957 - - - - - - YY1 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-1117]
38. strn3 ENSDARG00000001729 4608 1.721 - - 0.959 - 0.762 - - - - striatin, calmodulin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-405]
39. mettl3 ENSDARG00000012827 728 1.72 - - 0.984 0.736 - - - - - methyltransferase like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9498]
40. pycr1 pycr1 1258 1.718 - - 0.991 - - 0.727 - - -
41. fzd7b ENSDARG00000027589 2562 1.715 0.815 0.900 - - - - - - - frizzled class receptor 7b [Source:ZFIN;Acc:ZDB-GENE-990415-229]
42. orc1 ENSDARG00000039217, ENSDARG00000115400 795 1.71 - - 0.988 0.722 - - - - - origin recognition complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6960]
43. rnaseh2a ENSDARG00000018891 1979 1.709 0.816 - - - 0.893 - - - - ribonuclease H2, subunit A [Source:ZFIN;Acc:ZDB-GENE-040426-976]
44. pkib ENSDARG00000053110 527 1.702 - - 0.989 - - 0.713 - - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
45. smyd2b ENSDARG00000005629 8181 1.701 - 0.701 - - - - 1.000 - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
46. SNX19 SNX19 350 1.699 - - 0.989 - - 0.710 - - -
47. dyrk1ab ENSDARG00000023814 1769 1.694 - - 0.989 - - 0.705 - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
48. crb2a ENSDARG00000060106 1307 1.692 - 0.702 0.990 - - - - - - crumbs family member 2a [Source:ZFIN;Acc:ZDB-GENE-060612-1]
49. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 1.69 - - 0.954 - 0.736 - - - - LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
50. thoc3 ENSDARG00000056517 909 1.69 0.852 - - - 0.838 - - - - THO complex 3 [Source:ZFIN;Acc:ZDB-GENE-040808-14]
51. polb ENSDARG00000003749 2049 1.681 - - 0.978 - - 0.703 - - - polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
52. strada ENSDARG00000037929 1614 1.676 0.851 - - - 0.825 - - - - ste20-related kinase adaptor alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6482]
53. CU570681.1 CU570681.1 512 1.673 - - - 0.777 0.896 - - - -
54. TSG101 TSG101 1686 1.671 0.789 - - - 0.882 - - - -
55. rspry1 ENSDARG00000062558 1424 1.665 0.800 - - - 0.865 - - - - ring finger and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061026-2]
56. patl1 ENSDARG00000017423 2744 1.663 0.872 - - - 0.791 - - - - protein associated with topoisomerase II homolog 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-070209-83]
57. mad2l1 ENSDARG00000004713 3398 1.663 - - 0.922 - - 0.741 - - - MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]
58. kifc1 ENSDARG00000001558 6658 1.654 0.795 - 0.859 - - - - - - kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
59. dip2ba ENSDARG00000005350, ENSDARG00000111011, ENSDARG00000111214 1640 1.652 0.811 - - - 0.841 - - - - disco-interacting protein 2 homolog Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2305]
60. cpt1a cpt1a 674 1.648 0.759 - - - 0.889 - - - -
61. impdh1b ENSDARG00000029524 7472 1.645 - 0.725 0.920 - - - - - - IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
62. TMEM185A TMEM185A 5505 1.645 - - 0.943 - - 0.702 - - -
63. tmem5 1630 1.643 - - - - 0.887 0.756 - - - transmembrane protein 5
64. PLEKHH3 ENSDARG00000070174 2117 1.643 0.865 - - 0.778 - - - - - pleckstrin homology, MyTH4 and FERM domain containing H3 [Source:HGNC Symbol;Acc:HGNC:26105]
65. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.637 - 0.704 0.933 - - - - - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
66. itpkcb ENSDARG00000067741 2370 1.636 0.811 - - - 0.825 - - - - inositol-trisphosphate 3-kinase Cb [Source:ZFIN;Acc:ZDB-GENE-080225-27]
67. wdr59 ENSDARG00000088817 1005 1.635 - - - 0.762 0.873 - - - - WD repeat domain 59 [Source:ZFIN;Acc:ZDB-GENE-120215-187]
68. r3hcc1l ENSDARG00000089243 1254 1.631 - 0.750 - - 0.881 - - - - R3H domain and coiled-coil containing 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-4156]
69. si:ch211-288g17.3 ENSDARG00000070959 2425 1.627 - 0.731 - - 0.896 - - - - si:ch211-288g17.3 [Source:ZFIN;Acc:ZDB-GENE-030131-461]
70. PIK3CA_1 PIK3CA_1 4065 1.627 0.833 - - - 0.794 - - - -
71. C1H4orf27 C1H4orf27 1961 1.625 0.845 - - - 0.780 - - - -
72. ube2nb ENSDARG00000045877 4583 1.624 - 0.854 - - 0.770 - - - - ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
73. papolg ENSDARG00000012141 1445 1.624 - 0.759 - - 0.865 - - - - poly(A) polymerase gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1256]
74. kif5bb 1645 1.622 - 0.710 0.912 - - - - - - kinesin family member 5B, b
75. fmnl3 ENSDARG00000004372 821 1.621 - 0.723 - - 0.898 - - - - formin-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1571]
76. actl6a ENSDARG00000070828, ENSDARG00000115348 1961 1.621 - 0.743 - - 0.878 - - - - actin-like 6A [Source:ZFIN;Acc:ZDB-GENE-020419-36]
77. setd3 ENSDARG00000016513 1507 1.616 - 0.786 - - - 0.830 - - - SET domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9137]
78. fam203a fam203a 570 1.614 - 0.732 - 0.882 - - - - -
79. lmx1ba ENSDARG00000104815 376 1.614 - - - 0.873 - 0.741 - - - LIM homeobox transcription factor 1, beta a [Source:ZFIN;Acc:ZDB-GENE-050114-3]
80. casc4 ENSDARG00000074490 2019 1.603 - 0.733 - - 0.870 - - - - cancer susceptibility candidate 4 [Source:ZFIN;Acc:ZDB-GENE-091130-1]
81. mafba ENSDARG00000017121 1215 1.602 0.832 0.770 - - - - - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Ba [Source:ZFIN;Acc:ZDB-GENE-980526-515]
82. ENSDARG00000086878 ENSDARG00000086878 332 1.602 - - - - 0.896 0.706 - - -
83. GRIN2B GRIN2B 140 1.601 - - - - 0.898 0.703 - - -
84. cds2 ENSDARG00000035577 1475 1.599 0.800 0.799 - - - - - - - CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-4]
85. ddx42 ENSDARG00000037928 1659 1.597 - - - - 0.842 0.755 - - - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
86. leo1 ENSDARG00000055357 1644 1.596 - 0.758 - - 0.838 - - - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
87. CU855694.1 ENSDARG00000098513 402 1.593 - - - 0.853 - 0.740 - - -
88. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 1.592 - - 0.888 - - - - - 0.704 RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
89. vgll4l ENSDARG00000068409, ENSDARG00000110132 844 1.591 - 0.733 - - 0.858 - - - - vestigial like 4 like [Source:ZFIN;Acc:ZDB-GENE-070112-1682]
90. phax ENSDARG00000044298 2302 1.59 - 0.764 - - 0.826 - - - - phosphorylated adaptor for RNA export [Source:ZFIN;Acc:ZDB-GENE-040822-42]
91. nup210 ENSDARG00000063333 995 1.589 - - - - 0.879 0.710 - - - nucleoporin 210 [Source:ZFIN;Acc:ZDB-GENE-050208-132]
92. si:ch211-133l11.10 ENSDARG00000005626 381 1.588 - - - 0.872 - 0.716 - - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
93. C8H5orf51 C8H5orf51 1199 1.586 - 0.719 - - 0.867 - - - -
94. wasf3 wasf3 3287 1.582 - - 0.716 - 0.866 - - - -
95. C25H12orf73 C25H12orf73 2031 1.577 0.804 0.773 - - - - - - -
96. smarcb1a ENSDARG00000033647, ENSDARG00000111561 3528 1.577 - - 0.778 - 0.799 - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1a [Source:ZFIN;Acc:ZDB-GENE-041114-5]
97. rab6bb ENSDARG00000031343 1381 1.575 0.808 - - - - 0.767 - - - RAB6B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-050320-28]
98. FP236812.4 FP236812.4 1244 1.575 - 0.720 - - 0.855 - - - -
99. smim8 ENSDARG00000071040 622 1.575 0.850 0.725 - - - - - - - small integral membrane protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-423]
100. ppp4r2a ENSDARG00000026540 1782 1.573 0.834 - - - - 0.739 - - - protein phosphatase 4, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4922]

There are 2139 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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