Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hmg20a

Gene Name Gene ID Reads Annotation
hmg20a ENSDARG00000031198 1763 high mobility group 20A [Source:ZFIN;Acc:ZDB-GENE-030131-5107]










Genes with expression patterns similar to hmg20a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hmg20a ENSDARG00000031198 1763 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 high mobility group 20A [Source:ZFIN;Acc:ZDB-GENE-030131-5107]
2. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 2.517 - - - - 0.895 - 0.793 - 0.829 family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
3. tmem35 ENSDARG00000052567 5685 2.474 - - - - 0.883 - 0.757 - 0.834 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
4. SENP1 SENP1 1122 2.449 - - - - 0.909 - 0.784 - 0.756
5. marcksa ENSDARG00000004049 2518 2.435 - - - - 0.866 - 0.748 - 0.821 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
6. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 2.418 - - - - 0.866 - 0.803 - 0.749 ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
7. C24H17orf96 C24H17orf96 1538 2.411 - - - - 0.885 - 0.719 - 0.807
8. sin3b ENSDARG00000062472 2025 2.405 - - - - 0.898 0.754 - - 0.753 SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
9. atp6v0cb ENSDARG00000036577 3472 2.403 - - - - 0.956 - 0.700 - 0.747 ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
10. znf865 ENSDARG00000036698 15532 2.391 - - - - 0.867 0.733 0.791 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
11. nxf1 ENSDARG00000055076 3251 2.345 - - - - 0.883 - 0.757 - 0.705 nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
12. nrarpb ENSDARG00000018958 6225 2.317 - - - - 0.821 - 0.723 - 0.773 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
13. snrpd3l ENSDARG00000076283 7655 2.296 - - - - 0.799 - 0.721 - 0.776 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
14. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.267 - - - - 0.724 - 0.726 - 0.817 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
15. cdc26 ENSDARG00000077815, ENSDARG00000115575 1460 2.182 - 0.740 - - - 0.711 0.731 - - cell division cycle 26 homolog [Source:ZFIN;Acc:ZDB-GENE-040822-18]
16. pank1b ENSDARG00000010098 3202 1.749 - - - - 0.961 - 0.788 - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
17. calm1a ENSDARG00000021811 4791 1.718 - - - - 0.947 - 0.771 - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
18. nefma ENSDARG00000021351 790 1.713 - 0.809 - - 0.904 - - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
19. kif22 ENSDARG00000102624 3694 1.701 - - - - 0.952 - - - 0.749 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
20. nr2f1a ENSDARG00000052695 5037 1.7 - - - - 0.887 - - - 0.813 nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
21. rpl7l1 ENSDARG00000042864 3256 1.695 - - - - 0.936 - - - 0.759 ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
22. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.684 - - - - 0.885 - - - 0.799 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
23. hnrnpub ENSDARG00000004735 16496 1.679 - - - - - - 0.828 - 0.851 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
24. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.67 - - - - 0.889 - 0.781 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
25. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.666 - - - - - - 0.827 - 0.839 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
26. htatip htatip 1553 1.665 - - - - 0.885 - - - 0.780
27. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 1.658 - - - - 0.934 - - - 0.724 down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
28. wdr24 ENSDARG00000025507 505 1.658 - - - - 0.899 - - 0.759 - WD repeat domain 24 [Source:ZFIN;Acc:ZDB-GENE-040426-2012]
29. mcts1 ENSDARG00000025972 4662 1.65 - - - - 0.866 - 0.784 - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
30. FP245444.1 FP245444.1 1922 1.649 - - - - 0.898 - - - 0.751
31. rbm15b ENSDARG00000078966, ENSDARG00000112832 1888 1.642 - - - - 0.886 - 0.756 - - RNA binding motif protein 15B [Source:ZFIN;Acc:ZDB-GENE-080204-91]
32. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.641 - - - - 0.796 - - - 0.845 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
33. prdm16 prdm16 1346 1.638 - - - - 0.902 - 0.736 - -
34. ago4 ENSDARG00000100854 496 1.637 - - - - 0.903 - - - 0.734 argonaute RISC catalytic component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5357]
35. fen1 ENSDARG00000011404 3358 1.637 - - - - 0.836 - 0.801 - - flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
36. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.636 - - - - - - 0.818 - 0.818 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
37. spag7 ENSDARG00000011555 3224 1.63 - - - - 0.903 - 0.727 - - sperm associated antigen 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1632]
38. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.629 - - - - - - 0.797 - 0.832 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
39. BX005008.2 BX005008.2 708 1.628 0.722 - - - 0.906 - - - -
40. lgi1a ENSDARG00000020493 1218 1.626 - - - - 0.913 - 0.713 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
41. CR936437.1 CR936437.1 6465 1.624 - - - - - - 0.815 - 0.809
42. UBE2QL1 ENSDARG00000079276 3474 1.624 - - - - 0.901 - 0.723 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
43. msxe msxe 362 1.623 - - - - 0.908 - - 0.715 -
44. lsm14ab ENSDARG00000100553 3837 1.604 - - - - 0.848 - 0.756 - - LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
45. supt6h ENSDARG00000006524 3221 1.599 - - - - 0.870 0.729 - - - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
46. wu:fc51f04 wu:fc51f04 7074 1.592 - - - - 0.835 - - - 0.757
47. rtca ENSDARG00000002215 3558 1.59 - - - - - - 0.799 - 0.791 RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
48. h2afva ENSDARG00000068820 16427 1.588 - - - - - 0.751 0.837 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
49. apc ENSDARG00000058868 2605 1.585 - - - - 0.876 0.709 - - - adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
50. sap30bp ENSDARG00000031261 1348 1.574 - 0.798 - - - - 0.776 - - SAP30 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-457]
51. smarca5 ENSDARG00000052348 15433 1.57 - - - - - 0.749 - - 0.821 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
52. sumo3a ENSDARG00000028119 13447 1.569 - - - - - - 0.792 - 0.777 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
53. tbl1xr1b ENSDARG00000008966 2203 1.569 - - - - - - 0.864 - 0.705 transducin (beta)-like 1 X-linked receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1192]
54. hmgb3a ENSDARG00000056725 15668 1.568 - - - - - - 0.799 - 0.769 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
55. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.565 - - - - - - 0.818 - 0.747 si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
56. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 1.565 - - - - 0.729 - - - 0.836 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
57. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.564 - - - - - - 0.744 - 0.820 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
58. dnaja2l ENSDARG00000010745 2367 1.563 - - - - - - 0.754 - 0.809 DnaJ (Hsp40) homolog, subfamily A, member 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-2884]
59. pik3r3b ENSDARG00000034409, ENSDARG00000113215, ENSDARG00000117028 3213 1.561 - - - - - 0.753 0.808 - - phosphoinositide-3-kinase, regulatory subunit 3b (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-743]
60. mxi1 ENSDARG00000040884, ENSDARG00000111950 3239 1.556 - - - - - - 0.804 - 0.752 max interactor 1, dimerization protein [Source:ZFIN;Acc:ZDB-GENE-990415-151]
61. hmgb2b ENSDARG00000053990 11519 1.554 - - - - - - 0.761 - 0.793 high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
62. skib ENSDARG00000008034 6518 1.553 - - - - - 0.774 0.779 - - v-ski avian sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-990715-10]
63. eif4h ENSDARG00000042252 6742 1.549 - - - - - - 0.768 - 0.781 eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
64. inab ENSDARG00000053248 3239 1.549 - 0.710 - - - - - - 0.839 internexin neuronal intermediate filament protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-83]
65. CABZ01086220.1 CABZ01086220.1 723 1.547 - - - - - - 0.818 - 0.729
66. bcl11ab ENSDARG00000063153 3032 1.546 - - - - - - 0.707 - 0.839 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
67. luc7l ENSDARG00000055903 3357 1.545 - - - - - 0.787 0.758 - - LUC7-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-111]
68. tox ENSDARG00000032317 9126 1.542 - - - - - - 0.733 - 0.809 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
69. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 1.542 - - - - 0.822 - 0.720 - - discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
70. ptbp2b ENSDARG00000015901 2458 1.541 - - - - - - 0.778 - 0.763 polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
71. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 1.54 - - - - - - 0.759 - 0.781 zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]
72. ELOVL4 ELOVL4 3026 1.534 - - - - - - 0.710 - 0.824
73. foxo3b ENSDARG00000042904 5046 1.528 - - - - - 0.720 0.808 - - forkhead box O3b [Source:ZFIN;Acc:ZDB-GENE-990708-6]
74. kdm1a ENSDARG00000060679 6152 1.526 - - - - 0.772 - 0.754 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
75. hoxd9a ENSDARG00000059274 3414 1.524 - - - - - 0.735 0.789 - - homeobox D9a [Source:ZFIN;Acc:ZDB-GENE-990415-121]
76. ddx39ab ENSDARG00000015111 11619 1.522 - - - - - - 0.787 - 0.735 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
77. LDLRAD4 LDLRAD4 1237 1.521 - - - - - - 0.720 - 0.801
78. golga7ba ENSDARG00000036295 1460 1.52 - - - - - - 0.705 - 0.815 golgin A7 family, member Ba [Source:ZFIN;Acc:ZDB-GENE-050417-14]
79. rassf2a ENSDARG00000029865, ENSDARG00000113625 1134 1.52 - - - - - - 0.778 - 0.742 Ras association (RalGDS/AF-6) domain family member 2a [Source:ZFIN;Acc:ZDB-GENE-040912-124]
80. si:ch211-10a23.2 ENSDARG00000060656 471 1.52 - 0.789 - - - - - - 0.731 si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
81. HNRNPAB HNRNPAB 22267 1.519 - - - - - - 0.750 - 0.769
82. brd3b ENSDARG00000100129 6387 1.519 - - - - 0.801 - 0.718 - - bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
83. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 1.517 - - - - - - 0.750 - 0.767 contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
84. creb1a ENSDARG00000053586 5068 1.517 - - - - - - 0.773 - 0.744 cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
85. fzd3a ENSDARG00000021664 1958 1.514 - - - - - - 0.742 - 0.772 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
86. uspl1 ENSDARG00000034825, ENSDARG00000109866 457 1.513 - 0.787 - - - - - - 0.726 ubiquitin specific peptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-040930-7]
87. KIF4A KIF4A 3322 1.512 0.705 - - - - - 0.807 - -
88. prpf40a ENSDARG00000058467 6565 1.508 - - - - - - 0.743 - 0.765 PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
89. snrpa ENSDARG00000018890 4593 1.507 0.739 - - - - - - - 0.768 small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]
90. tada3l ENSDARG00000058220, ENSDARG00000113214, ENSDARG00000115305 2257 1.504 - - - - - - 0.760 - 0.744 transcriptional adaptor 3 (NGG1 homolog, yeast)-like [Source:ZFIN;Acc:ZDB-GENE-030131-6725]
91. hnrpl 6412 1.504 - - - - - - 0.716 - 0.788 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
92. rtn1b ENSDARG00000021143 1682 1.503 - - - - - - 0.759 - 0.744 reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
93. sephs1 ENSDARG00000058292 3347 1.502 - - - - - 0.758 0.744 - - selenophosphate synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3670]
94. phf21ab ENSDARG00000021378 1706 1.499 0.766 - - - - - - - 0.733 PHD finger protein 21Ab [Source:ZFIN;Acc:ZDB-GENE-030131-6456]
95. mibp_1 ENSDARG00000101362 193 1.495 - 0.790 - - - - 0.705 - - muscle-specific beta 1 integrin binding protein [Source:ZFIN;Acc:ZDB-GENE-030404-1]
96. tmsb ENSDARG00000054911 6411 1.494 - - - - - - 0.758 - 0.736 thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
97. cdk2ap2 ENSDARG00000103145 8024 1.489 - - - - 0.725 - - - 0.764 cyclin-dependent kinase 2 associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040718-35]
98. kif11 ENSDARG00000010948 4973 1.487 - - - - - 0.701 - - 0.786 kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
99. CABZ01028287.1 CABZ01028287.1 626 1.485 - - - - - - 0.737 - 0.748
100. g3bp1 ENSDARG00000017741 7622 1.485 - - - - - - 0.715 - 0.770 GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]

There are 1417 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA