Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for hmbsb

Gene Name Gene ID Reads Annotation
hmbsb ENSDARG00000055991 3037 hydroxymethylbilane synthase, b [Source:ZFIN;Acc:ZDB-GENE-050522-491]










Genes with expression patterns similar to hmbsb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hmbsb ENSDARG00000055991 3037 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 hydroxymethylbilane synthase, b [Source:ZFIN;Acc:ZDB-GENE-050522-491]
2. cahz ENSDARG00000011166 5771 4.284 - 0.867 0.797 0.971 0.845 - - - 0.804 carbonic anhydrase [Source:ZFIN;Acc:ZDB-GENE-980526-39]
3. hbae1_1 37308 3.251 - 0.904 0.818 - 0.799 - - - 0.730 hemoglobin, alpha embryonic 1
4. hbae1 14666 3.225 - 0.862 0.783 0.814 0.766 - - - - hemoglobin, alpha embryonic 1
5. epb41b ENSDARG00000029019 1472 3.2 - 0.840 0.810 - 0.779 - - - 0.771 erythrocyte membrane protein band 4.1b [Source:ZFIN;Acc:ZDB-GENE-030130-1]
6. si:busm1-118j2.5 si:busm1-118j2.5 10462 2.611 - 0.873 0.867 - 0.871 - - - -
7. slc4a1a ENSDARG00000012881 8972 2.548 - 0.862 0.888 - - - - - 0.798 solute carrier family 4 (anion exchanger), member 1a (Diego blood group) [Source:ZFIN;Acc:ZDB-GENE-010525-1]
8. gpd1l ENSDARG00000040024 2182 2.527 - 0.819 - - - - 0.773 0.935 - glycerol-3-phosphate dehydrogenase 1 like [Source:ZFIN;Acc:ZDB-GENE-041010-220]
9. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 2.515 - 0.871 0.779 - - - - - 0.865 hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
10. si:dkey-25o16.2 1990 2.504 - 0.835 0.849 - - - - - 0.820 si:dkey-25o16.2, transcript variant X1
11. hbbe3 ENSDARG00000038147, ENSDARG00000109344 102871 2.481 - 0.825 0.874 - 0.782 - - - - hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
12. hbbe1.1 ENSDARG00000113599 64815 2.458 - 0.825 - - 0.796 - - - 0.837 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
13. hbae3 ENSDARG00000079305 100050 2.374 - 0.713 - - 0.854 - - - 0.807 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
14. klf4b klf4b 533 2.325 - 0.750 0.767 - 0.808 - - - -
15. gata1a ENSDARG00000013477, ENSDARG00000117116 902 2.307 - - 0.827 - 0.724 - - - 0.756 GATA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-980526-268]
16. HBQ1 HBQ1 413 2.301 - 0.739 0.775 - 0.787 - - - -
17. AL935210.1 ENSDARG00000088330 24618 2.3 - - 0.786 - 0.711 - - - 0.803 hemoglobin, alpha embryonic 1.3 [Source:NCBI gene;Acc:572729]
18. klfd klfd 625 2.267 - - 0.755 - 0.702 - - - 0.810
19. nup155 ENSDARG00000001777 3417 1.866 - - - 0.966 - - - 0.900 - nucleoporin 155 [Source:ZFIN;Acc:ZDB-GENE-040426-711]
20. rab23 ENSDARG00000004151 1077 1.817 - 0.857 - - - - - 0.960 - RAB23, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050522-328]
21. tbl3 ENSDARG00000052344 1530 1.794 - 0.831 - - - - - 0.963 - transducin (beta)-like 3 [Source:ZFIN;Acc:ZDB-GENE-041114-104]
22. ptrhd1 ENSDARG00000016122 2705 1.79 - 0.851 - - - - - 0.939 - peptidyl-tRNA hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081110-2]
23. sulf1 ENSDARG00000038428 2748 1.784 - 0.839 - - - - - 0.945 - sulfatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9242]
24. chtopa ENSDARG00000057234 3287 1.772 - 0.807 - 0.965 - - - - - chromatin target of PRMT1a [Source:ZFIN;Acc:ZDB-GENE-030131-210]
25. CASKIN2_1 CASKIN2_1 2299 1.77 - 0.804 - - - - - 0.966 -
26. lrpprc ENSDARG00000043970 3847 1.769 - 0.821 - 0.948 - - - - - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
27. drap1 ENSDARG00000041203 6749 1.756 - 0.785 - 0.971 - - - - - DR1-associated protein 1 (negative cofactor 2 alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-400]
28. mast4 1164 1.744 - 0.796 - - - - - 0.948 - microtubule associated serine/threonine kinase family member 4, transcript variant X6
29. TMEM218 ENSDARG00000027129 716 1.734 - - - - - - 0.772 0.962 - transmembrane protein 218 [Source:ZFIN;Acc:ZDB-GENE-040426-1232]
30. cbll1 ENSDARG00000015222 995 1.728 - 0.759 - - - - - 0.969 - Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-691]
31. PHB2 PHB2 3755 1.713 - 0.854 - - - - - 0.859 -
32. mybbp1a ENSDARG00000078214 2458 1.707 - 0.745 - - - - - 0.962 - MYB binding protein (P160) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9864]
33. papola ENSDARG00000009585 9567 1.705 - 0.744 - 0.961 - - - - - poly(A) polymerase alpha [Source:ZFIN;Acc:ZDB-GENE-030131-3507]
34. ZNF335 ENSDARG00000076920 456 1.7 - - - - - - 0.783 0.917 - zinc finger protein 335 [Source:HGNC Symbol;Acc:HGNC:15807]
35. phax ENSDARG00000044298 2302 1.693 - 0.726 - 0.967 - - - - - phosphorylated adaptor for RNA export [Source:ZFIN;Acc:ZDB-GENE-040822-42]
36. ACVR2B 6615 1.691 - 0.736 - 0.955 - - - - - activin A receptor, type IIB
37. yy1a ENSDARG00000042796 4982 1.683 - 0.716 - 0.967 - - - - - YY1 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-1117]
38. mrpl11 ENSDARG00000013075 2927 1.67 - - - - - 0.724 - 0.946 - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
39. fzd7b ENSDARG00000027589 2562 1.667 - 0.811 - - - - - 0.856 - frizzled class receptor 7b [Source:ZFIN;Acc:ZDB-GENE-990415-229]
40. rdh14b ENSDARG00000002467 991 1.657 - 0.702 - - - - - 0.955 - retinol dehydrogenase 14b [Source:ZFIN;Acc:ZDB-GENE-030131-6605]
41. alas2 ENSDARG00000038643, ENSDARG00000113125 4935 1.648 - 0.867 - - 0.781 - - - - aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
42. kri1 ENSDARG00000075380 1463 1.645 - 0.719 - - - - - 0.926 - KRI1 homolog [Source:ZFIN;Acc:ZDB-GENE-040915-3]
43. cct8 ENSDARG00000008243 6843 1.639 - 0.840 - - - - - 0.799 - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
44. nelfe ENSDARG00000004343 1647 1.636 - 0.715 - - - - - 0.921 - negative elongation factor complex member E [Source:ZFIN;Acc:ZDB-GENE-040718-69]
45. fdx1 ENSDARG00000056410, ENSDARG00000115831 3463 1.63 - - - - - 0.729 - 0.901 - ferredoxin 1 [Source:ZFIN;Acc:ZDB-GENE-071015-2]
46. nt5c2l1 ENSDARG00000034852 1014 1.618 - 0.805 - - - - - - 0.813 5'-nucleotidase, cytosolic II, like 1 [Source:ZFIN;Acc:ZDB-GENE-031006-8]
47. CREBZF ENSDARG00000089787 4261 1.612 - 0.719 - - - - - 0.893 - CREB/ATF bZIP transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-8015]
48. cbx3a ENSDARG00000003860 4922 1.602 - - - - - - 0.737 0.865 - chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
49. urod ENSDARG00000006818 856 1.591 - 0.797 0.794 - - - - - - uroporphyrinogen decarboxylase [Source:ZFIN;Acc:ZDB-GENE-000208-18]
50. alad ENSDARG00000100372 1711 1.568 - 0.851 - - - - - - 0.717 aminolevulinate dehydratase [Source:ZFIN;Acc:ZDB-GENE-050417-123]
51. hmbsa ENSDARG00000008840 2601 1.563 - 0.838 0.725 - - - - - - hydroxymethylbilane synthase a [Source:ZFIN;Acc:ZDB-GENE-040426-1375]
52. hbbe1.1_1 ENSDARG00000113599 31704 1.553 - - 0.701 - 0.852 - - - - hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
53. mrps16 ENSDARG00000098972, ENSDARG00000115452 2085 1.542 - 0.777 - - - - 0.765 - - mitochondrial ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-041010-123]
54. aqp1a.1 ENSDARG00000023713 3237 1.542 - 0.707 - - - - - 0.835 - aquaporin 1a (Colton blood group), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7764]
55. blf ENSDARG00000043126 433 1.537 - 0.799 - - 0.738 - - - - bloody fingers [Source:ZFIN;Acc:ZDB-GENE-050721-1]
56. MEX3C 476 1.534 - - - - - 0.798 0.736 - - mex-3 RNA binding family member C
57. cth ENSDARG00000074301 3860 1.534 - 0.705 - - - - - 0.829 - cystathionase (cystathionine gamma-lyase) [Source:ZFIN;Acc:ZDB-GENE-030131-774]
58. epor_1 ENSDARG00000090834 366 1.529 - 0.758 - - - - - - 0.771 erythropoietin receptor [Source:ZFIN;Acc:ZDB-GENE-071116-1]
59. ehd1b ENSDARG00000014793, ENSDARG00000110243, ENSDARG00000110919 2496 1.527 - 0.773 - - - 0.754 - - - EH-domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2069]
60. foxn2b ENSDARG00000045105, ENSDARG00000112523 525 1.518 - 0.734 - - - - 0.784 - - forkhead box N2b [Source:ZFIN;Acc:ZDB-GENE-050417-1]
61. tmpob ENSDARG00000022978 8121 1.506 - 0.720 - - - - - 0.786 - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
62. mycn ENSDARG00000006837 1616 1.502 - 0.758 - - - - 0.744 - - MYCN proto-oncogene, bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-020711-1]
63. pwp2h ENSDARG00000037109 1395 1.499 - 0.748 - - - - 0.751 - - PWP2 periodic tryptophan protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-021031-3]
64. g3bp1 ENSDARG00000017741 7622 1.497 - 0.709 - - - - - 0.788 - GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
65. ppox ENSDARG00000102167 929 1.496 - 0.790 - - - - - - 0.706 protoporphyrinogen oxidase [Source:ZFIN;Acc:ZDB-GENE-051120-90]
66. khsrp ENSDARG00000026489 15738 1.485 - - - 0.774 - - - 0.711 - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
67. nmt1b ENSDARG00000057206 654 1.479 - 0.717 - - - - - - 0.762 N-myristoyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-081222-3]
68. ccdc12 ENSDARG00000023003, ENSDARG00000113770 1731 1.475 - 0.706 - - - - - 0.769 - coiled-coil domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-040801-108]
69. fam46c 1913 1.468 - 0.751 - - - 0.717 - - - family with sequence similarity 46, member C
70. tamm41 ENSDARG00000100157 1116 1.461 - 0.745 - - - 0.716 - - - TAM41 mitochondrial translocator assembly and maintenance homolog [Source:ZFIN;Acc:ZDB-GENE-051030-99]
71. afap1l1b ENSDARG00000056453 583 1.456 - 0.734 - - - 0.722 - - - actin filament associated protein 1-like 1b [Source:ZFIN;Acc:ZDB-GENE-061013-428]
72. BX511086.1 BX511086.1 8308 1.453 - 0.743 - - - - - 0.710 -
73. uros ENSDARG00000027491 1147 1.445 - 0.740 0.705 - - - - - - uroporphyrinogen III synthase [Source:ZFIN;Acc:ZDB-GENE-040323-2]
74. C10H8orf4 C10H8orf4 361 1.412 - 0.709 - - - - - - 0.703
75. ZBTB39 ENSDARG00000019265 687 0.979 - - - - - - - 0.979 - zinc finger and BTB domain containing 39 [Source:ZFIN;Acc:ZDB-GENE-130822-1]
76. FRMPD1_1 FRMPD1_1 1589 0.978 - - - 0.978 - - - - -
77. lpp ENSDARG00000023578 3581 0.977 - - - 0.977 - - - - - LIM domain containing preferred translocation partner in lipoma [Source:ZFIN;Acc:ZDB-GENE-040426-918]
78. CU633999.1 ENSDARG00000098197 2880 0.977 - - - 0.977 - - - - -
79. slc1a5 ENSDARG00000099186 7580 0.977 - - - 0.977 - - - - - solute carrier family 1 (neutral amino acid transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-070501-4]
80. dip2ba ENSDARG00000005350, ENSDARG00000111011, ENSDARG00000111214 1640 0.977 - - - 0.977 - - - - - disco-interacting protein 2 homolog Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2305]
81. ndrg2 ENSDARG00000011170 11442 0.977 - - - 0.977 - - - - - NDRG family member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-15]
82. KRT23 KRT23 1443 0.976 - - - 0.976 - - - - -
83. ccdc25 ENSDARG00000021753 3837 0.975 - - - 0.975 - - - - - coiled-coil domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1389]
84. kcnk1a ENSDARG00000045067 743 0.975 - - - 0.975 - - - - - potassium channel, subfamily K, member 1a [Source:ZFIN;Acc:ZDB-GENE-070620-26]
85. mphosph10 ENSDARG00000012495 1679 0.975 - - - 0.975 - - - - - M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-2146]
86. rab18b ENSDARG00000098344 1154 0.974 - - - 0.974 - - - - - RAB18B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040801-185]
87. pcnxl2 610 0.974 - - - 0.974 - - - - - pecanex-like 2 (Drosophila), transcript variant X2
88. PLD5 PLD5 496 0.974 - - - 0.974 - - - - -
89. OLFML2A ENSDARG00000005648 1658 0.974 - - - 0.974 - - - - - olfactomedin-like 2A [Source:ZFIN;Acc:ZDB-GENE-081105-107]
90. zgc:154055 ENSDARG00000103924 452 0.974 - - - 0.974 - - - - - zgc:154055 [Source:ZFIN;Acc:ZDB-GENE-060929-612]
91. hrsp12 3981 0.974 - - - 0.974 - - - - - heat-responsive protein 12, transcript variant 1
92. slc16a9b ENSDARG00000104687 826 0.973 - - - 0.973 - - - - - solute carrier family 16, member 9b [Source:ZFIN;Acc:ZDB-GENE-040801-69]
93. hopx ENSDARG00000089368 2342 0.973 - - - 0.973 - - - - - HOP homeobox [Source:ZFIN;Acc:ZDB-GENE-031016-2]
94. C5H9orf41 C5H9orf41 789 0.973 - - - 0.973 - - - - -
95. fam204a ENSDARG00000039699, ENSDARG00000114877 1178 0.973 - - - 0.973 - - - - - family with sequence similarity 204, member A [Source:ZFIN;Acc:ZDB-GENE-040718-271]
96. ccar1 ENSDARG00000074759, ENSDARG00000114899 1329 0.973 - - - 0.973 - - - - - cell division cycle and apoptosis regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-146]
97. ephb4b ENSDARG00000027112 633 0.973 - - - 0.973 - - - - - eph receptor B4b [Source:ZFIN;Acc:ZDB-GENE-990415-65]
98. tspan18b ENSDARG00000015015 1433 0.973 - - - 0.973 - - - - - tetraspanin 18b [Source:ZFIN;Acc:ZDB-GENE-040718-137]
99. arf6b ENSDARG00000052928 4585 0.973 - - - 0.973 - - - - - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
100. si:ch211-113p18.3 ENSDARG00000087835 377 0.972 - - - - - - - 0.972 - si:ch211-113p18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4983]

There are 1107 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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