Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hmbsa

Gene Name Gene ID Reads Annotation
hmbsa ENSDARG00000008840 2601 hydroxymethylbilane synthase a [Source:ZFIN;Acc:ZDB-GENE-040426-1375]










Genes with expression patterns similar to hmbsa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hmbsa ENSDARG00000008840 2601 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 hydroxymethylbilane synthase a [Source:ZFIN;Acc:ZDB-GENE-040426-1375]
2. ndufs6 ENSDARG00000056583 7220 2.356 - 0.777 - - - 0.742 0.837 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:ZFIN;Acc:ZDB-GENE-040912-86]
3. hadhab ENSDARG00000060594 3664 2.3 0.768 - - - - 0.722 0.810 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-041111-204]
4. MRPS12_1 MRPS12_1 2714 2.285 0.745 0.790 - - - - 0.750 - -
5. mrpl37 ENSDARG00000062916 1600 2.28 0.792 0.719 - - - - 0.769 - - mitochondrial ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-050309-20]
6. trap1 ENSDARG00000024317, ENSDARG00000114173 2189 2.28 - 0.714 - - - 0.744 0.822 - - TNF receptor-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4257]
7. bag2 ENSDARG00000035005 1402 2.274 - 0.754 - - - 0.712 0.808 - - BCL2 associated athanogene 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1399]
8. slc4a1a ENSDARG00000012881 8972 2.223 - 0.755 0.758 0.710 - - - - - solute carrier family 4 (anion exchanger), member 1a (Diego blood group) [Source:ZFIN;Acc:ZDB-GENE-010525-1]
9. urod ENSDARG00000006818 856 2.215 - 0.770 0.712 0.733 - - - - - uroporphyrinogen decarboxylase [Source:ZFIN;Acc:ZDB-GENE-000208-18]
10. hbbe3 ENSDARG00000038147, ENSDARG00000109344 102871 2.184 - 0.710 0.759 0.715 - - - - - hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
11. mrpl36 ENSDARG00000070607 4069 1.679 - - - - - 0.838 0.841 - - mitochondrial ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-060503-821]
12. rab5if ENSDARG00000074790 8807 1.649 - 0.750 - - - - 0.899 - - RAB5 interacting factor [Source:ZFIN;Acc:ZDB-GENE-030131-5938]
13. tns1 tns1 5891 1.649 - 0.767 - - - - 0.882 - -
14. alg3 ENSDARG00000053155 1843 1.643 - 0.814 - - - - 0.829 - - asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-050522-334]
15. ncl ENSDARG00000002710 16951 1.639 - 0.846 - - - 0.793 - - - nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
16. aco2 ENSDARG00000007294, ENSDARG00000111879 5162 1.629 - 0.732 - - - - 0.897 - - aconitase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-1390]
17. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.629 - 0.723 - - - - 0.906 - -
18. cahz ENSDARG00000011166 5771 1.611 - 0.833 0.778 - - - - - - carbonic anhydrase [Source:ZFIN;Acc:ZDB-GENE-980526-39]
19. cct8 ENSDARG00000008243 6843 1.611 - 0.784 - - - - 0.827 - - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
20. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.608 - 0.801 - - - - 0.807 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
21. ATP5J_2 ATP5J_2 2381 1.598 - 0.757 - - - - 0.841 - -
22. mccc1 ENSDARG00000102538, ENSDARG00000115996 2069 1.595 - 0.783 - - - - 0.812 - - methylcrotonoyl-CoA carboxylase 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-050208-450]
23. COL22A1 COL22A1 4473 1.594 - 0.741 - - - - 0.853 - -
24. cd248b ENSDARG00000077938 2561 1.592 - 0.736 - - - - 0.856 - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
25. EHBP1L1 EHBP1L1 2500 1.591 - 0.798 - - - - 0.793 - -
26. klhl40a ENSDARG00000039052 2537 1.591 - 0.742 - - - - 0.849 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
27. si:busm1-118j2.5 si:busm1-118j2.5 10462 1.589 - 0.823 0.766 - - - - - -
28. ITGB1BP2 ENSDARG00000030176 2472 1.589 - 0.709 - - - - 0.880 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
29. txn2 ENSDARG00000034777 4071 1.588 - 0.760 - - - - 0.828 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
30. pdss1 ENSDARG00000017910 1290 1.587 - 0.774 - - - - 0.813 - - prenyl (decaprenyl) diphosphate synthase, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4430]
31. DEDD ENSDARG00000029783 530 1.584 0.813 - - - - 0.771 - - - death effector domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-386]
32. ZC3H12A_1 ZC3H12A_1 558 1.582 0.798 - - - - - - 0.784 -
33. par1 par1 564 1.579 - - - - - 0.774 0.805 - -
34. ndufab1b ENSDARG00000014915 12796 1.579 - 0.755 - - - - 0.824 - - NADH:ubiquinone oxidoreductase subunit AB1b [Source:ZFIN;Acc:ZDB-GENE-030131-4437]
35. fitm1 ENSDARG00000056464 1759 1.578 - 0.749 - - - - 0.829 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
36. ndufa8 ENSDARG00000058041, ENSDARG00000111900 5493 1.577 - - - - - 0.722 0.855 - - NADH:ubiquinone oxidoreductase subunit A8 [Source:ZFIN;Acc:ZDB-GENE-040426-1688]
37. setd3 ENSDARG00000016513 1507 1.576 - 0.736 - - - - 0.840 - - SET domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9137]
38. dnaja3a ENSDARG00000058494, ENSDARG00000111151 2497 1.574 0.778 0.796 - - - - - - - DnaJ (Hsp40) homolog, subfamily A, member 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7837]
39. sf3b5 ENSDARG00000016855 4015 1.572 0.750 0.822 - - - - - - - splicing factor 3b, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040718-181]
40. hbae1_1 37308 1.571 - 0.827 0.744 - - - - - - hemoglobin, alpha embryonic 1
41. znf106a ENSDARG00000016651 6049 1.571 - 0.713 - - - - 0.858 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
42. myod1 ENSDARG00000030110 6019 1.57 - 0.717 - - - - 0.853 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
43. txlnbb ENSDARG00000076241 6396 1.568 - 0.712 - - - - 0.856 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
44. hmbsb ENSDARG00000055991 3037 1.563 - 0.838 0.725 - - - - - - hydroxymethylbilane synthase, b [Source:ZFIN;Acc:ZDB-GENE-050522-491]
45. acsl1 acsl1 4216 1.558 - - - - - 0.747 0.811 - -
46. rwdd1 ENSDARG00000015930 2380 1.558 - 0.780 - - - - 0.778 - - RWD domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-270]
47. zgc:66479 ENSDARG00000008732 3347 1.557 - 0.738 - - - - 0.819 - - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
48. TRIM63 TRIM63 1600 1.554 - 0.730 - - - - 0.824 - -
49. tcp11l2 ENSDARG00000027316 1906 1.553 0.761 - - - - - 0.792 - - t-complex 11, testis-specific-like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1956]
50. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.552 - 0.754 - - - - 0.798 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
51. srl ENSDARG00000104587 11126 1.548 - 0.709 - - - - 0.839 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
52. sptb ENSDARG00000030490 7128 1.547 - 0.707 - - - - 0.840 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
53. st8sia6 ENSDARG00000021195 2244 1.545 0.811 0.734 - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-060322-9]
54. pcmt ENSDARG00000015201 5132 1.544 - 0.711 - - - - 0.833 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
55. aimp1 ENSDARG00000060036 5343 1.543 - - - - - 0.744 0.799 - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
56. eef2k ENSDARG00000035835 2906 1.542 - 0.721 - - - - 0.821 - - eukaryotic elongation factor 2 kinase [Source:ZFIN;Acc:ZDB-GENE-020916-2]
57. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.542 - 0.821 - - - - 0.721 - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
58. cap2 ENSDARG00000104478 3266 1.538 - 0.715 - - - - 0.823 - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
59. fam120c ENSDARG00000019205 1365 1.537 - - - - - 0.837 0.700 - - family with sequence similarity 120C [Source:ZFIN;Acc:ZDB-GENE-090313-228]
60. ntmt1 ENSDARG00000022399 5779 1.533 - 0.708 - - - - 0.825 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
61. BDP1 BDP1 2514 1.532 - 0.734 - - - - 0.798 - -
62. TMPO TMPO 3264 1.532 - 0.707 - - - - 0.825 - -
63. ppih ENSDARG00000041530 2085 1.532 0.746 0.786 - - - - - - - peptidylprolyl isomerase H (cyclophilin H) [Source:ZFIN;Acc:ZDB-GENE-040625-127]
64. nfe2 ENSDARG00000020606 224 1.529 - 0.709 - - - - - 0.820 - nuclear factor, erythroid 2 [Source:ZFIN;Acc:ZDB-GENE-030124-1]
65. vwde ENSDARG00000103443 5758 1.527 - 0.727 - - - - 0.800 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
66. chrna1 ENSDARG00000009021 2931 1.527 - 0.704 - - - - 0.823 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
67. cox17 ENSDARG00000069920, ENSDARG00000114117 5591 1.525 0.732 - - - - - 0.793 - - cytochrome c oxidase copper chaperone COX17 [Source:ZFIN;Acc:ZDB-GENE-040912-91]
68. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.525 - 0.704 - - - - 0.821 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
69. cox7c ENSDARG00000104537 12169 1.524 - - - - - 0.703 0.821 - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
70. alad ENSDARG00000100372 1711 1.524 0.775 0.749 - - - - - - - aminolevulinate dehydratase [Source:ZFIN;Acc:ZDB-GENE-050417-123]
71. FHOD3_1 FHOD3_1 983 1.52 - 0.725 - - - - 0.795 - -
72. aurkaip1 ENSDARG00000074985 2214 1.517 - 0.776 - - - - 0.741 - - aurora kinase A interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-24]
73. mccc2 ENSDARG00000017571 5635 1.517 0.780 - - - - - 0.737 - - methylcrotonoyl-CoA carboxylase 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040426-2493]
74. mef2aa ENSDARG00000031756 2699 1.513 - 0.749 - - - - 0.764 - - myocyte enhancer factor 2aa [Source:ZFIN;Acc:ZDB-GENE-990415-163]
75. ptpn21 ENSDARG00000062248 2010 1.512 0.797 0.715 - - - - - - - protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
76. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 1.511 - 0.755 0.756 - - - - - - hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
77. rrs1 ENSDARG00000003941 1257 1.509 - - - - - 0.801 0.708 - - RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-9345]
78. limch1a ENSDARG00000074275 2981 1.508 - 0.700 - - - - 0.808 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
79. jph1a ENSDARG00000058603 2852 1.505 - 0.720 - - - - 0.785 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
80. alpk2 ENSDARG00000079637 1483 1.505 - 0.725 - - - - 0.780 - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
81. mef2d ENSDARG00000040237 6144 1.503 - 0.708 - - - - 0.795 - - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
82. hdr ENSDARG00000004392 351 1.502 - - - 0.743 - - - 0.759 - hematopoietic death receptor [Source:ZFIN;Acc:ZDB-GENE-030826-5]
83. PPP1R8 PPP1R8 1897 1.501 - 0.763 - - - - 0.738 - -
84. DNAJA4 ENSDARG00000051762 5657 1.498 - 0.728 - - - - 0.770 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
85. si:ch1073-325m22.2 ENSDARG00000095921 8534 1.497 - - - - - 0.702 0.795 - - si:ch1073-325m22.2 [Source:NCBI gene;Acc:100333135]
86. mir133b_1 671 1.497 - 0.727 - - - - 0.770 - - microRNA 133b
87. pbxip1a ENSDARG00000071015 4960 1.497 - 0.734 - - - - 0.763 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
88. zgc:111974 zgc:111974 1386 1.495 0.754 - - - - 0.741 - - -
89. uqcrc2a ENSDARG00000014794 3949 1.494 - 0.723 - - - - 0.771 - - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
90. slc25a16 ENSDARG00000057287, ENSDARG00000109352 988 1.494 - 0.716 - - - 0.778 - - - solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 [Source:ZFIN;Acc:ZDB-GENE-030131-3299]
91. wu:fb15e04 wu:fb15e04 1713 1.493 0.792 - - - - - 0.701 - -
92. RBM6 ENSDARG00000077060 3521 1.493 0.778 0.715 - - - - - - - RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
93. hccs hccs 1758 1.491 - - - - - 0.752 0.739 - -
94. alpk3a ENSDARG00000078989 1992 1.491 - 0.735 - - - - 0.756 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
95. MRPL52 ENSDARG00000090568 4402 1.49 0.755 - - - - - 0.735 - - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
96. stxbp3 ENSDARG00000008142 2604 1.49 0.728 - - - - - 0.762 - - syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
97. prickle1a ENSDARG00000040649 700 1.489 0.785 0.704 - - - - - - - prickle homolog 1a [Source:ZFIN;Acc:ZDB-GENE-030724-5]
98. pomp ENSDARG00000032296 4439 1.489 - 0.781 - - - - 0.708 - - proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
99. spry2 ENSDARG00000078308 1200 1.488 - 0.740 - - - - 0.748 - - sprouty RTK signaling antagonist 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7038]
100. mrps15 ENSDARG00000109289 3258 1.488 - 0.782 - - - - 0.706 - - mitochondrial ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-040718-188]

There are 1528 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA