Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hlx1

Gene Name Gene ID Reads Annotation
hlx1 ENSDARG00000009134 484 H2.0-like homeo box 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5304]










Genes with expression patterns similar to hlx1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hlx1 ENSDARG00000009134 484 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 H2.0-like homeo box 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5304]
2. fam212aa 1132 2.24 0.770 - - - - 0.736 0.734 - - family with sequence similarity 212, member Aa, transcript variant X1
3. TSHZ2 ENSDARG00000079201 301 1.736 - 0.933 - - - - 0.803 - - teashirt zinc finger homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-100322-2]
4. dnajc12 ENSDARG00000086691 260 1.667 - 0.850 - - - - 0.817 - - DnaJ (Hsp40) homolog, subfamily C, member 12 [Source:ZFIN;Acc:ZDB-GENE-070801-3]
5. rbp7b ENSDARG00000070486, ENSDARG00000111858 449 1.665 0.749 - - - - - 0.916 - - retinol binding protein 7b, cellular [Source:ZFIN;Acc:ZDB-GENE-081022-134]
6. NDNF ENSDARG00000062936 7287 1.611 0.826 - - - - - 0.785 - - neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
7. frya ENSDARG00000013921 506 1.609 - 0.826 0.783 - - - - - - furry homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060510-4]
8. clec14a ENSDARG00000103533 718 1.559 0.749 - - - - - 0.810 - - C-type lectin domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-030131-5536]
9. CU915778.2 CU915778.2 194 1.543 - - - - - 0.754 0.789 - -
10. ngdn ENSDARG00000045372 782 1.538 0.749 - - - - - 0.789 - - neuroguidin, EIF4E binding protein [Source:ZFIN;Acc:ZDB-GENE-031030-13]
11. cept1b ENSDARG00000021177 675 1.504 - 0.718 - - - - 0.786 - - choline/ethanolamine phosphotransferase 1b [Source:ZFIN;Acc:ZDB-GENE-071004-33]
12. uqcrc2a ENSDARG00000014794 3949 1.495 - - - - 0.721 - 0.774 - - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
13. DUSP27 ENSDARG00000099889 1197 1.488 0.713 - - - - 0.775 - - - dual specificity phosphatase 27 [Source:ZFIN;Acc:ZDB-GENE-140513-1]
14. exosc10 ENSDARG00000037708, ENSDARG00000115953 1121 1.483 - - - - - 0.758 0.725 - - exosome component 10 [Source:ZFIN;Acc:ZDB-GENE-040426-781]
15. nop16 ENSDARG00000044402 3645 1.482 - - - - - 0.748 0.734 - - NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
16. si:dkey-148f10.4 ENSDARG00000094627, ENSDARG00000109786 236 1.467 - - - - - 0.722 0.745 - - si:dkey-148f10.4 [Source:ZFIN;Acc:ZDB-GENE-060503-292]
17. aqp8b ENSDARG00000089749 108 1.466 0.741 - - - 0.725 - - - - aquaporin 8b [Source:ZFIN;Acc:ZDB-GENE-080220-47]
18. arhgef28 ENSDARG00000060415 142 1.452 - 0.739 - - - - 0.713 - - Rho guanine nucleotide exchange factor (GEF) 28 [Source:ZFIN;Acc:ZDB-GENE-060531-28]
19. CU855815.2 CU855815.2 80 0.897 - 0.897 - - - - - - -
20. arv1 ENSDARG00000074757 227 0.881 - 0.881 - - - - - - - ARV1 homolog, fatty acid homeostasis modulator [Source:ZFIN;Acc:ZDB-GENE-080204-35]
21. cyba ENSDARG00000018283 702 0.88 - - - - - - 0.880 - - cytochrome b-245, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-1526]
22. aqp8b_1 ENSDARG00000089749 586 0.878 0.878 - - - - - - - - aquaporin 8b [Source:ZFIN;Acc:ZDB-GENE-080220-47]
23. fscn2b ENSDARG00000074396 177 0.864 0.864 - - - - - - - - fascin actin-bundling protein 2b, retinal [Source:ZFIN;Acc:ZDB-GENE-040426-1740]
24. si:dkey-154b15.1 ENSDARG00000057010 85 0.864 - 0.864 - - - - - - - si:dkey-154b15.1 [Source:ZFIN;Acc:ZDB-GENE-060503-52]
25. artnb ENSDARG00000093714 107 0.862 - - - - - - 0.862 - - artemin b [Source:ZFIN;Acc:ZDB-GENE-070705-129]
26. meox1 ENSDARG00000007891, ENSDARG00000115382 1584 0.86 - - - - - 0.860 - - - mesenchyme homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-149]
27. KDM4A KDM4A 372 0.854 - - - - - - 0.854 - -
28. ezh1 ENSDARG00000037894 294 0.853 - 0.853 - - - - - - - enhancer of zeste 1 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-050114-1]
29. si:ch211-127i16.2 ENSDARG00000092976, ENSDARG00000116049 152 0.849 - - - - - - 0.849 - - si:ch211-127i16.2 [Source:ZFIN;Acc:ZDB-GENE-091204-54]
30. CU694324.1 CU694324.1 257 0.847 0.847 - - - - - - - -
31. ccdc102a ENSDARG00000003872 791 0.846 - - - - - 0.846 - - - coiled-coil domain containing 102A [Source:ZFIN;Acc:ZDB-GENE-030131-4044]
32. chrnb2b ENSDARG00000017790 155 0.846 - 0.846 - - - - - - - cholinergic receptor, nicotinic, beta 2b [Source:ZFIN;Acc:ZDB-GENE-070821-3]
33. mcm5_2 ENSDARG00000019507 66 0.844 - - - - - - 0.844 - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
34. eif4a2 ENSDARG00000016477 665 0.842 - - - - - - 0.842 - - eukaryotic translation initiation factor 4A, isoform 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2802]
35. ZNF784_2 ZNF784_2 181 0.841 - 0.841 - - - - - - -
36. si:ch211-51h9.7 ENSDARG00000074720 227 0.837 - - - - - 0.837 - - - si:ch211-51h9.7 [Source:ZFIN;Acc:ZDB-GENE-081104-235]
37. ift27 ENSDARG00000099279 393 0.83 - - - - - - 0.830 - - intraflagellar transport 27 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-041212-9]
38. zgc:162967 zgc:162967 2132 0.83 - - - - - 0.830 - - -
39. tbx15 ENSDARG00000002582 755 0.827 0.827 - - - - - - - - T-box 15 [Source:ZFIN;Acc:ZDB-GENE-020529-1]
40. SLC41A2 SLC41A2 202 0.826 - - - - - - 0.826 - -
41. ARAP2 ARAP2 428 0.824 - - - - - - 0.824 - -
42. UBN2 UBN2 557 0.823 - - - - - 0.823 - - -
43. si:dkey-18j14.4 si:dkey-18j14.4 60 0.82 - 0.820 - - - - - - -
44. raraa ENSDARG00000056783 1404 0.818 - - - 0.818 - - - - - retinoic acid receptor, alpha a [Source:ZFIN;Acc:ZDB-GENE-980526-284]
45. rwdd2b ENSDARG00000055426 294 0.817 - - - - - 0.817 - - - RWD domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041001-119]
46. C12H17orf89 C12H17orf89 474 0.817 - 0.817 - - - - - - -
47. cilp ENSDARG00000053362 1429 0.817 - - - - - 0.817 - - - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
48. ube2q2 ENSDARG00000013990 1064 0.816 - - - - - 0.816 - - - ubiquitin-conjugating enzyme E2Q family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1919]
49. plod3_1 ENSDARG00000076317 80 0.816 - 0.816 - - - - - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-021031-4]
50. ube2d4 ENSDARG00000015057 1089 0.814 0.814 - - - - - - - - ubiquitin-conjugating enzyme E2D 4 (putative) [Source:ZFIN;Acc:ZDB-GENE-070424-86]
51. map7d3 ENSDARG00000060771 1739 0.814 - - - - - 0.814 - - - MAP7 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-121129-3]
52. si:dkey-285e18.8 si:dkey-285e18.8 170 0.812 - - - - - 0.812 - - -
53. si:dkey-46m10.3 si:dkey-46m10.3 246 0.81 - - - - - - 0.810 - -
54. alpk2 ENSDARG00000079637 1483 0.809 0.809 - - - - - - - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
55. diexf 520 0.809 - - - - - 0.809 - - - digestive organ expansion factor homolog
56. trps1 ENSDARG00000104082 918 0.809 - 0.809 - - - - - - - trichorhinophalangeal syndrome I [Source:ZFIN;Acc:ZDB-GENE-030131-8404]
57. pcmtl ENSDARG00000042848, ENSDARG00000110149 301 0.808 - 0.808 - - - - - - - l-isoaspartyl protein carboxyl methyltransferase, like [Source:ZFIN;Acc:ZDB-GENE-040426-1738]
58. prickle1a ENSDARG00000040649 700 0.807 - - - - - - 0.807 - - prickle homolog 1a [Source:ZFIN;Acc:ZDB-GENE-030724-5]
59. galns ENSDARG00000051853, ENSDARG00000113387 347 0.807 - - - - - - 0.807 - - galactosamine (N-acetyl)-6-sulfatase [Source:ZFIN;Acc:ZDB-GENE-070112-1152]
60. gnaq ENSDARG00000011487 123 0.805 - 0.805 - - - - - - - guanine nucleotide binding protein (G protein), q polypeptide [Source:ZFIN;Acc:ZDB-GENE-081104-25]
61. mmp13a ENSDARG00000012395, ENSDARG00000114451 178 0.804 - - - - - - 0.804 - - matrix metallopeptidase 13a [Source:ZFIN;Acc:ZDB-GENE-031202-2]
62. mirlet7i 192 0.801 - - - - - - 0.801 - - microRNA let-7i
63. CU075695.3 CU075695.3 253 0.8 - - - - - - 0.800 - -
64. tal1 ENSDARG00000019930 523 0.8 - - - - - 0.800 - - - T-cell acute lymphocytic leukemia 1 [Source:ZFIN;Acc:ZDB-GENE-980526-501]
65. zgc:173556 82 0.799 - - - 0.799 - - - - - zgc:173556
66. PARL 2511 0.799 - - - - - 0.799 - - - presenilin associated rhomboid like
67. hemk1 ENSDARG00000078894 397 0.799 0.799 - - - - - - - - HemK methyltransferase family member 1 [Source:ZFIN;Acc:ZDB-GENE-050208-185]
68. MSANTD2 ENSDARG00000079474 121 0.799 - - - - - - 0.799 - - Myb/SANT DNA binding domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26266]
69. si:dkey-253d23.2 ENSDARG00000071589 143 0.799 - - - - - - 0.799 - - si:dkey-253d23.2 [Source:ZFIN;Acc:ZDB-GENE-050208-410]
70. si:dkey-238o14.5 si:dkey-238o14.5 450 0.799 - 0.799 - - - - - - -
71. fxr1 ENSDARG00000022968 2831 0.798 - - - - - 0.798 - - - fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
72. spata2l ENSDARG00000068814 152 0.797 - - - - - - 0.797 - - spermatogenesis associated 2-like [Source:ZFIN;Acc:ZDB-GENE-070705-402]
73. CU306817.2 CU306817.2 406 0.797 0.797 - - - - - - - -
74. ugp2a ENSDARG00000005578 2835 0.797 - - - - - 0.797 - - - UDP-glucose pyrophosphorylase 2a [Source:ZFIN;Acc:ZDB-GENE-090311-46]
75. si:ch1073-184j22.2 ENSDARG00000078598 707 0.794 - - - - - 0.794 - - - si:ch1073-184j22.2 [Source:ZFIN;Acc:ZDB-GENE-081104-32]
76. NOG NOG 324 0.793 - - - - - 0.793 - - -
77. MON1B_1 MON1B_1 697 0.792 - 0.792 - - - - - - -
78. limch1a ENSDARG00000074275 2981 0.792 0.792 - - - - - - - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
79. TNFRSF14_3 TNFRSF14_3 135 0.792 - - - - - - 0.792 - -
80. si:dkey-119g10.4 si:dkey-119g10.4 7 0.791 - - - - - - 0.791 - -
81. gpr126 gpr126 51 0.79 - - - - - - 0.790 - -
82. zgc:66433 ENSDARG00000071697 688 0.79 0.790 - - - - - - - - zgc:66433 [Source:ZFIN;Acc:ZDB-GENE-030131-9832]
83. slc1a9 ENSDARG00000098269 12 0.79 - - - - - - 0.790 - - solute carrier family 1 (glutamate transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-101111-9]
84. purbb ENSDARG00000103546 4983 0.788 - - - - - 0.788 - - - purine-rich element binding protein Bb [Source:ZFIN;Acc:ZDB-GENE-040426-1478]
85. nmd3 ENSDARG00000015676 303 0.788 - - - - - - 0.788 - - NMD3 ribosome export adaptor [Source:ZFIN;Acc:ZDB-GENE-050320-149]
86. igfbp1a ENSDARG00000099351 1717 0.788 - 0.788 - - - - - - - insulin-like growth factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-021231-1]
87. CR954145.1 CR954145.1 327 0.787 - - - - - - 0.787 - -
88. rnf123 ENSDARG00000031269 519 0.787 - - - - - 0.787 - - - ring finger protein 123 [Source:ZFIN;Acc:ZDB-GENE-050208-529]
89. IGFN1 IGFN1 5030 0.786 0.786 - - - - - - - -
90. gcc1 ENSDARG00000045541 1821 0.786 - 0.786 - - - - - - - GRIP and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-118]
91. CU928083.1 ENSDARG00000097907 1279 0.786 - 0.786 - - - - - - -
92. si:dkey-13m3.1 si:dkey-13m3.1 45 0.785 - - - - - 0.785 - - -
93. CABZ01080457.1 CABZ01080457.1 445 0.785 - - - - - - 0.785 - -
94. ints2 ENSDARG00000069085, ENSDARG00000101876 1249 0.785 - - - - - - 0.785 - - integrator complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-148]
95. ccdc19 ccdc19 495 0.785 - - - - - 0.785 - - -
96. fli1a ENSDARG00000054632 330 0.785 0.785 - - - - - - - - Fli-1 proto-oncogene, ETS transcription factor a [Source:ZFIN;Acc:ZDB-GENE-980526-426]
97. wrap53 ENSDARG00000086150 975 0.785 - - - - - - 0.785 - - WD repeat containing, antisense to TP53 [Source:ZFIN;Acc:ZDB-GENE-030131-515]
98. ehd2 ehd2 1089 0.785 0.785 - - - - - - - -
99. mrps6 ENSDARG00000039543 1892 0.784 - - - - - - 0.784 - - mitochondrial ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-060825-59]
100. pax9 ENSDARG00000053829 1193 0.784 0.784 - - - - - - - - paired box 9 [Source:ZFIN;Acc:ZDB-GENE-980526-399]

There are 499 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA