Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for hira

Gene Name Gene ID Reads Annotation
hira ENSDARG00000013434 2204 histone cell cycle regulator a [Source:ZFIN;Acc:ZDB-GENE-030131-6296]










Genes with expression patterns similar to hira

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hira ENSDARG00000013434 2204 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 histone cell cycle regulator a [Source:ZFIN;Acc:ZDB-GENE-030131-6296]
2. lbr ENSDARG00000014013 4835 2.455 - - 0.937 0.772 0.746 - - - - lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
3. kansl2 ENSDARG00000056318, ENSDARG00000113311 4702 2.414 - - 0.914 - - - 0.782 - 0.718 KAT8 regulatory NSL complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041010-67]
4. polb ENSDARG00000003749 2049 1.781 - - 0.954 - - - 0.827 - - polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
5. phf12a ENSDARG00000074303 1025 1.708 - 0.784 0.924 - - - - - - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
6. pdzrn3b ENSDARG00000073869 1566 1.675 - - 0.923 - - - 0.752 - - PDZ domain containing RING finger 3b [Source:ZFIN;Acc:ZDB-GENE-071022-4]
7. fam50a ENSDARG00000024895 3020 1.668 - - 0.911 - - - 0.757 - - family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
8. pbrm1l ENSDARG00000077038, ENSDARG00000116839 1978 1.667 - - 0.927 - - - - - 0.740 polybromo 1, like [Source:ZFIN;Acc:ZDB-GENE-010501-3]
9. wu:fb17g07 wu:fb17g07 10567 1.666 - 0.762 0.904 - - - - - -
10. fignl1 ENSDARG00000016427 636 1.659 0.737 - 0.922 - - - - - - fidgetin-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1862]
11. wdhd1 ENSDARG00000015998 775 1.649 - - 0.940 - 0.709 - - - - WD repeat and HMG-box DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1665]
12. tuba1c ENSDARG00000055216 8384 1.64 - - 0.899 - 0.741 - - - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
13. si:ch211-125e6.8 ENSDARG00000094518 538 1.635 - - 0.919 - - 0.716 - - - si:ch211-125e6.8 [Source:ZFIN;Acc:ZDB-GENE-070912-42]
14. cdca5 ENSDARG00000044437 2041 1.629 - - 0.908 - - - 0.721 - - cell division cycle associated 5 [Source:ZFIN;Acc:ZDB-GENE-030131-235]
15. tox ENSDARG00000032317 9126 1.612 - 0.736 0.876 - - - - - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
16. cd99l2 ENSDARG00000056722 5036 1.605 - - 0.856 - 0.749 - - - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
17. esco2 ENSDARG00000014685 1971 1.587 - - - - 0.858 - - - 0.729 establishment of sister chromatid cohesion N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-156]
18. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 1.584 - - 0.821 - - - - - 0.763 high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
19. cbx2 ENSDARG00000044938 1576 1.572 0.832 0.740 - - - - - - - chromobox homolog 2 (Drosophila Pc class) [Source:ZFIN;Acc:ZDB-GENE-030131-5502]
20. msl2a ENSDARG00000038909 1357 1.521 - - - - 0.738 - 0.783 - - male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]
21. cpsf6 ENSDARG00000018618 3923 1.517 - - - - 0.732 - - - 0.785 cleavage and polyadenylation specific factor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5277]
22. brd7 ENSDARG00000008380 3654 1.513 - 0.772 - - - 0.741 - - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
23. pa2g4b ENSDARG00000070657 7999 1.511 - 0.758 - - - - - - 0.753 proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
24. taf5 ENSDARG00000018325 1363 1.5 - - - 0.756 0.744 - - - - TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-051120-180]
25. CR388231.3 ENSDARG00000105601 2404 1.497 - 0.709 - - - - - - 0.788
26. magoh ENSDARG00000038635, ENSDARG00000109837 2880 1.492 - - - - 0.749 - - - 0.743 mago homolog, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-041216-1]
27. apopt1 ENSDARG00000092473 682 1.492 0.724 0.768 - - - - - - - apoptogenic 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-090313-66]
28. mif ENSDARG00000071336 1328 1.489 - 0.753 - 0.736 - - - - - macrophage migration inhibitory factor [Source:ZFIN;Acc:ZDB-GENE-080708-1]
29. casp8ap2 ENSDARG00000022718 523 1.485 - 0.733 - - - - 0.752 - - caspase 8 associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030826-8]
30. nr2f2 ENSDARG00000040926 5213 1.484 - 0.739 - - 0.745 - - - - nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
31. h2afx ENSDARG00000029406 2116 1.481 - - - - - 0.744 - - 0.737 H2A histone family, member X [Source:ZFIN;Acc:ZDB-GENE-040426-987]
32. psmc5 ENSDARG00000015315 8458 1.476 - - - - - 0.725 0.751 - - proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6547]
33. hif1an ENSDARG00000031915 2098 1.471 - - - - 0.703 - - - 0.768 hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
34. ly75 ENSDARG00000053113 196 1.451 0.723 - - - - 0.728 - - - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
35. skp2 ENSDARG00000004937, ENSDARG00000114929 1584 1.447 - - - - 0.706 - 0.741 - - S-phase kinase-associated protein 2, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030219-158]
36. zbtb17 ENSDARG00000074548 661 1.445 - 0.742 - - - 0.703 - - - zinc finger and BTB domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-090313-240]
37. brms1 ENSDARG00000051955 900 1.436 - - - - - 0.718 - - 0.718 BRMS1, transcriptional repressor and anoikis regulator [Source:ZFIN;Acc:ZDB-GENE-030616-596]
38. PLEKHG4 ENSDARG00000075964 2860 1.434 - - - - - - 0.703 - 0.731 pleckstrin homology domain containing, family G (with RhoGef domain) member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-4824]
39. ncaph ENSDARG00000061468, ENSDARG00000113773 1401 1.432 - - - - - 0.731 - - 0.701 non-SMC condensin I complex, subunit H [Source:ZFIN;Acc:ZDB-GENE-070112-652]
40. pno1 ENSDARG00000008502 4547 1.422 - 0.722 - - - - 0.700 - - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
41. ccne2 ENSDARG00000098529 4695 0.951 - - 0.951 - - - - - - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
42. ctnnbip1 ENSDARG00000038954 2519 0.948 - - 0.948 - - - - - - catenin, beta interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-3]
43. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 0.942 - - 0.942 - - - - - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
44. xylt1 ENSDARG00000061248 2357 0.941 - - 0.941 - - - - - - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
45. atad5a ENSDARG00000070568 1840 0.939 - - 0.939 - - - - - - ATPase family, AAA domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-070912-20]
46. CR548630.1 CR548630.1 3301 0.939 - - 0.939 - - - - - -
47. eif4e3 ENSDARG00000005078 1624 0.939 - - 0.939 - - - - - - eukaryotic translation initiation factor 4E family member 3 [Source:ZFIN;Acc:ZDB-GENE-040912-156]
48. fkbp8 ENSDARG00000001734 1709 0.939 - - 0.939 - - - - - - FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
49. dbx1a ENSDARG00000086393 3161 0.938 - - 0.938 - - - - - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
50. ZBTB16 ZBTB16 3385 0.937 - - 0.937 - - - - - -
51. ldb1a ENSDARG00000010137 3035 0.937 - - 0.937 - - - - - - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
52. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 0.935 - - 0.935 - - - - - - LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
53. wu:fc26g07 wu:fc26g07 1165 0.935 - - 0.935 - - - - - -
54. yy1b ENSDARG00000027978 2669 0.934 - - 0.934 - - - - - - YY1 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2127]
55. gpatch1 ENSDARG00000033418 1349 0.934 - - 0.934 - - - - - - G patch domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040914-65]
56. usp8 ENSDARG00000063719 643 0.933 - - 0.933 - - - - - - ubiquitin specific peptidase 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1949]
57. kansl3 ENSDARG00000029556 2487 0.933 - - 0.933 - - - - - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
58. crb2a ENSDARG00000060106 1307 0.933 - - 0.933 - - - - - - crumbs family member 2a [Source:ZFIN;Acc:ZDB-GENE-060612-1]
59. phc2b_1 ENSDARG00000013224 1316 0.932 - - 0.932 - - - - - - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
60. ranbp9 ENSDARG00000061048 2687 0.931 - - 0.931 - - - - - - RAN binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-021030-5]
61. lta4h ENSDARG00000006029, ENSDARG00000112240 3146 0.931 - - 0.931 - - - - - - leukotriene A4 hydrolase [Source:ZFIN;Acc:ZDB-GENE-040426-2477]
62. ptbp1a ENSDARG00000019362 6290 0.931 - - 0.931 - - - - - - polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]
63. cenpf ENSDARG00000055133 5267 0.931 - - 0.931 - - - - - - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
64. gins4 ENSDARG00000016044 671 0.93 - - 0.930 - - - - - - GINS complex subunit 4 (Sld5 homolog) [Source:ZFIN;Acc:ZDB-GENE-040801-59]
65. wdr82 ENSDARG00000014083 3159 0.929 - - 0.929 - - - - - - WD repeat domain 82 [Source:ZFIN;Acc:ZDB-GENE-030131-333]
66. znf410 ENSDARG00000008218 1807 0.929 - - 0.929 - - - - - - zinc finger protein 410 [Source:ZFIN;Acc:ZDB-GENE-040426-1817]
67. smad4 smad4 2519 0.929 - - 0.929 - - - - - -
68. ss18 ENSDARG00000002970 2618 0.928 - - 0.928 - - - - - - synovial sarcoma translocation, chromosome 18 (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030131-4867]
69. qki2 ENSDARG00000010018 2230 0.928 - - 0.928 - - - - - - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
70. TMEM185A TMEM185A 5505 0.927 - - 0.927 - - - - - -
71. smx5 ENSDARG00000070867, ENSDARG00000111500, ENSDARG00000113078, ENSDARG00000113975 3132 0.927 - - 0.927 - - - - - - smx5 [Source:ZFIN;Acc:ZDB-GENE-000616-10]
72. cln6a ENSDARG00000077584 1090 0.927 - - 0.927 - - - - - - CLN6, transmembrane ER protein a [Source:ZFIN;Acc:ZDB-GENE-041010-57]
73. actr10 ENSDARG00000038432 1598 0.927 - - 0.927 - - - - - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
74. psmd10 ENSDARG00000015628, ENSDARG00000109675 983 0.927 - - 0.927 - - - - - - proteasome 26S subunit, non-ATPase 10 [Source:ZFIN;Acc:ZDB-GENE-050112-1]
75. xrcc5_1 ENSDARG00000099298 1533 0.927 - - 0.927 - - - - - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
76. paxip1 ENSDARG00000005606 1417 0.926 - - 0.926 - - - - - - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
77. lgi1a ENSDARG00000020493 1218 0.926 - - 0.926 - - - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
78. pank1b ENSDARG00000010098 3202 0.925 - - 0.925 - - - - - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
79. pou2f2a ENSDARG00000019658, ENSDARG00000036816 2027 0.925 - - 0.925 - - - - - - POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]
80. rnf2 ENSDARG00000010381 3427 0.925 - - 0.925 - - - - - - ring finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5243]
81. CT573103.1 ENSDARG00000097550 950 0.924 - - 0.924 - - - - - -
82. arid1b ENSDARG00000092503 1376 0.924 - - 0.924 - - - - - - AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]
83. LPHN2 LPHN2 1971 0.924 - - 0.924 - - - - - -
84. tjp1a ENSDARG00000077506 2658 0.924 - - 0.924 - - - - - - tight junction protein 1a [Source:ZFIN;Acc:ZDB-GENE-031001-2]
85. appbp2 ENSDARG00000007566 1961 0.924 - - 0.924 - - - - - - amyloid beta precursor protein (cytoplasmic tail) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1715]
86. tbx2a ENSDARG00000018025, ENSDARG00000109541 1183 0.924 - - 0.924 - - - - - - T-box 2a [Source:ZFIN;Acc:ZDB-GENE-990917-4]
87. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 0.923 - - 0.923 - - - - - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
88. arid2 ENSDARG00000007413 4413 0.923 - - 0.923 - - - - - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
89. pnn ENSDARG00000015851 1269 0.923 - - 0.923 - - - - - - pinin, desmosome associated protein [Source:ZFIN;Acc:ZDB-GENE-060519-3]
90. lmbr1 ENSDARG00000024092, ENSDARG00000116241 1418 0.922 - - 0.922 - - - - - - limb development membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-090128-4]
91. orc1 ENSDARG00000039217, ENSDARG00000115400 795 0.922 - - 0.922 - - - - - - origin recognition complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6960]
92. inip ENSDARG00000028523 1925 0.922 - - 0.922 - - - - - - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
93. smg5 ENSDARG00000041481 1286 0.922 - - 0.922 - - - - - - SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
94. setdb1a ENSDARG00000041243 1952 0.921 - - 0.921 - - - - - - SET domain, bifurcated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2421]
95. pou6f1 ENSDARG00000011570 1501 0.921 - - 0.921 - - - - - - POU class 6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-530]
96. DNAJC16 ENSDARG00000059699 507 0.921 - - 0.921 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 16 [Source:ZFIN;Acc:ZDB-GENE-130530-683]
97. GUSB ENSDARG00000063126 2712 0.921 - - 0.921 - - - - - - glucuronidase, beta [Source:ZFIN;Acc:ZDB-GENE-070705-256]
98. gspt1l ENSDARG00000098627 8381 0.921 - - 0.921 - - - - - - G1 to S phase transition 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-4009]
99. klhl15 ENSDARG00000001930 793 0.921 - - 0.921 - - - - - - kelch-like family member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-99]
100. PGBD4_3 PGBD4_3 861 0.921 - - 0.921 - - - - - -

There are 965 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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