Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for higd2a

Gene Name Gene ID Reads Annotation
higd2a ENSDARG00000052371 7354 HIG1 hypoxia inducible domain family, member 2A [Source:ZFIN;Acc:ZDB-GENE-050417-119]










Genes with expression patterns similar to higd2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. higd2a ENSDARG00000052371 7354 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 HIG1 hypoxia inducible domain family, member 2A [Source:ZFIN;Acc:ZDB-GENE-050417-119]
2. RPRD1A ENSDARG00000104861 2560 2.534 - - - - - - 0.711 0.945 0.878 regulation of nuclear pre-mRNA domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-141211-20]
3. ppdpfa ENSDARG00000007682 3214 2.474 - 0.800 - - - - 0.736 0.938 - pancreatic progenitor cell differentiation and proliferation factor a [Source:ZFIN;Acc:ZDB-GENE-030219-204]
4. pdcd4a ENSDARG00000021702 7293 2.458 - 0.829 - - - - 0.747 0.882 - programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
5. slmo2 slmo2 5559 2.315 - 0.765 - - - - 0.752 0.798 -
6. si:ch1073-325m22.2 ENSDARG00000095921 8534 2.186 - 0.754 - - - 0.722 0.710 - - si:ch1073-325m22.2 [Source:NCBI gene;Acc:100333135]
7. rpz5 ENSDARG00000075718 1703 1.778 - - - - - - - 0.945 0.833 rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]
8. acaa2 ENSDARG00000038881 2649 1.715 - - - - - - 0.779 0.936 - acetyl-CoA acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1996]
9. mfap2 ENSDARG00000059367 3774 1.705 - - - - - - 0.744 0.961 - microfibril associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6710]
10. slco3a1 ENSDARG00000018726 590 1.704 0.763 - - - - - - 0.941 - solute carrier organic anion transporter family, member 3A1 [Source:ZFIN;Acc:ZDB-GENE-030131-8662]
11. ndufa1 ENSDARG00000036329, ENSDARG00000111888 18361 1.704 - - - - - 0.841 0.863 - - NADH:ubiquinone oxidoreductase subunit A1 [Source:ZFIN;Acc:ZDB-GENE-040625-168]
12. sft2d1 ENSDARG00000007362 1763 1.685 - - - - - 0.767 - 0.918 - SFT2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1350]
13. ARID3C ENSDARG00000067729, ENSDARG00000114447 8069 1.684 - - - - - - - 0.920 0.764 AT rich interactive domain 3C (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-060526-12]
14. stx4 ENSDARG00000052518 1848 1.66 - - - - - 0.718 - 0.942 - syntaxin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2455]
15. brd1b ENSDARG00000051798 1712 1.643 - - - - - - 0.705 0.938 - bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
16. atp5h 18018 1.635 - - - - - 0.735 - 0.900 - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
17. zgc:193541 ENSDARG00000092873 21276 1.633 - - - - - 0.823 0.810 - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
18. cox7c ENSDARG00000104537 12169 1.613 - - - - - 0.778 0.835 - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
19. taldo1 ENSDARG00000103369 3804 1.604 - 0.730 - - - - - - 0.874 transaldolase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3277]
20. atpif1b 8625 1.599 - - - - - 0.804 0.795 - - ATPase inhibitory factor 1b
21. atp5e 14858 1.584 - - - - - 0.794 0.790 - - ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
22. fam89a ENSDARG00000079979 4375 1.58 - - - - - - 0.711 0.869 - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
23. helz ENSDARG00000030560 3259 1.579 - - - - - - 0.716 - 0.863 helicase with zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-2419]
24. zfand3 ENSDARG00000052833 2682 1.575 - - - - - - 0.707 - 0.868 zinc finger, AN1-type domain 3 [Source:ZFIN;Acc:ZDB-GENE-050706-134]
25. ndufs1 ENSDARG00000028546 5795 1.571 - - - - - 0.781 0.790 - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:ZFIN;Acc:ZDB-GENE-030131-478]
26. dcn ENSDARG00000012066 6182 1.561 - - - - - 0.716 0.845 - - decorin [Source:ZFIN;Acc:ZDB-GENE-010102-1]
27. stxbp3 ENSDARG00000008142 2604 1.557 - 0.786 - - - - 0.771 - - syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
28. ndufb11 ENSDARG00000043467 7495 1.556 - - - - - 0.838 0.718 - - NADH:ubiquinone oxidoreductase subunit B11 [Source:ZFIN;Acc:ZDB-GENE-050309-25]
29. cnppd1 ENSDARG00000027078 3778 1.552 - - - - - 0.780 0.772 - - cyclin Pas1/PHO80 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6808]
30. capzb ENSDARG00000100252 10444 1.551 - - - - - 0.719 0.832 - - capping actin protein of muscle Z-line subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-7023]
31. denr ENSDARG00000037229 8370 1.542 - - - - - 0.781 0.761 - - density-regulated protein [Source:ZFIN;Acc:ZDB-GENE-040718-450]
32. ogdha ENSDARG00000034270 10334 1.539 - 0.742 - - - - 0.797 - - oxoglutarate (alpha-ketoglutarate) dehydrogenase a (lipoamide) [Source:ZFIN;Acc:ZDB-GENE-030131-2143]
33. acadvl ENSDARG00000016687 5329 1.538 - - - - - 0.757 0.781 - - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
34. atp5j 4272 1.537 - - - - - 0.748 0.789 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
35. dynlrb1 ENSDARG00000021582, ENSDARG00000104233 6310 1.536 - - - - - 0.740 - - 0.796 dynein, light chain, roadblock-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-989]
36. tma7 ENSDARG00000071670 13372 1.519 - - - - - 0.785 0.734 - - translation machinery associated 7 homolog [Source:ZFIN;Acc:ZDB-GENE-061027-176]
37. eif4h ENSDARG00000042252 6742 1.512 - 0.717 - - - 0.795 - - - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
38. SNRPG ENSDARG00000099667 18697 1.503 - - - - - - 0.728 0.775 - small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
39. psmb4 ENSDARG00000054696 8100 1.502 - - - - - - 0.759 - 0.743 proteasome subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-050417-333]
40. uba1 ENSDARG00000037559 11579 1.5 - 0.746 - - - - - 0.754 - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
41. BRK1 ENSDARG00000041974 6430 1.497 - 0.784 - - - 0.713 - - - BRICK1, SCAR/WAVE actin-nucleating complex subunit [Source:ZFIN;Acc:ZDB-GENE-040625-77]
42. USMG5 USMG5 10356 1.495 - 0.714 - - - - 0.781 - -
43. rpl22 ENSDARG00000070437 56743 1.489 - - - - - - 0.781 - 0.708 ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276]
44. chchd2 ENSDARG00000059304, ENSDARG00000112202 7438 1.483 - - - - - 0.709 0.774 - - coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1737]
45. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 1.483 - - - - - 0.724 0.759 - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
46. slc25a11 ENSDARG00000035741 3377 1.472 - - - - - 0.718 0.754 - - solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 [Source:ZFIN;Acc:ZDB-GENE-040625-79]
47. cdc42 ENSDARG00000044573 11795 1.471 - 0.718 - - - - - - 0.753 cell division cycle 42 [Source:ZFIN;Acc:ZDB-GENE-030131-8783]
48. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.47 - - - - - 0.711 0.759 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
49. ndufa10 ENSDARG00000013333 6597 1.469 - 0.761 - - - 0.708 - - - NADH:ubiquinone oxidoreductase subunit A10 [Source:ZFIN;Acc:ZDB-GENE-030131-670]
50. rhebl1 ENSDARG00000039162 3966 1.465 - 0.754 - - - - 0.711 - - Ras homolog, mTORC1 binding like 1 [Source:ZFIN;Acc:ZDB-GENE-000510-1]
51. nop10 ENSDARG00000104227 2463 1.465 - 0.751 - - - - 0.714 - - NOP10 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-041007-4]
52. csnk1da ENSDARG00000008370 3469 1.465 - - - - - 0.703 0.762 - - casein kinase 1, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-825]
53. ncoa2 ENSDARG00000017929 2520 1.462 0.720 0.742 - - - - - - - nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-010406-3]
54. capza1b ENSDARG00000056090, ENSDARG00000109842, ENSDARG00000110402 12199 1.462 - 0.723 - - - - 0.739 - - capping actin protein of muscle Z-line subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-031002-24]
55. col11a1b ENSDARG00000009014 9998 1.46 - - - - - - 0.722 0.738 - collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
56. COL2A1 COL2A1 18161 1.448 - - - - - - - 0.706 0.742
57. selm 2395 1.422 - 0.703 - - - - 0.719 - - selenoprotein M
58. fam114a1 ENSDARG00000008287, ENSDARG00000116401 949 0.96 - - - - - - - 0.960 - family with sequence similarity 114, member A1 [Source:ZFIN;Acc:ZDB-GENE-070410-52]
59. dusp6 ENSDARG00000070914, ENSDARG00000116888 4473 0.959 - - - - - - - 0.959 - dual specificity phosphatase 6 [Source:ZFIN;Acc:ZDB-GENE-030613-1]
60. rbfa ENSDARG00000073705 601 0.956 - - - - - - - 0.956 - ribosome binding factor A [Source:ZFIN;Acc:ZDB-GENE-070410-83]
61. PCOLCE_1 PCOLCE_1 2148 0.954 - - - - - - - 0.954 -
62. dynlt1 ENSDARG00000045909 2451 0.953 - - - - - - - 0.953 - dynein, light chain, Tctex-type 1 [Source:ZFIN;Acc:ZDB-GENE-041210-9]
63. pgd ENSDARG00000015343, ENSDARG00000117150 2512 0.952 - - - - - - - 0.952 - phosphogluconate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2807]
64. psmb1 ENSDARG00000009640 8628 0.952 - - - - - - - 0.952 - proteasome subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040618-2]
65. plxnb2a ENSDARG00000003811, ENSDARG00000094799 1662 0.95 - - - - - - - 0.950 - plexin b2a [Source:ZFIN;Acc:ZDB-GENE-030131-8917]
66. copb2 ENSDARG00000038743, ENSDARG00000114286 6404 0.949 - - - - - - - 0.949 - coatomer protein complex, subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-010724-7]
67. lman1 ENSDARG00000069980 2550 0.948 - - - - - - - 0.948 - lectin, mannose-binding, 1 [Source:ZFIN;Acc:ZDB-GENE-060201-4]
68. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 0.948 - - - - - - - 0.948 - ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
69. hm13 ENSDARG00000037846 5019 0.945 - - - - - - - 0.945 - histocompatibility (minor) 13 [Source:ZFIN;Acc:ZDB-GENE-020802-3]
70. dcp1a ENSDARG00000100136 714 0.945 - - - - - - - 0.945 - decapping mRNA 1A [Source:ZFIN;Acc:ZDB-GENE-030723-5]
71. cyp20a1 ENSDARG00000006040 2570 0.944 - - - - - - - 0.944 - cytochrome P450, family 20, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2646]
72. bnip4 ENSDARG00000022832, ENSDARG00000117207 3100 0.943 - - - - - - - 0.943 - BCL2 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-051113-212]
73. TSG101_1 TSG101_1 1215 0.943 - - - - - - - 0.943 -
74. cnot3a ENSDARG00000007135 3084 0.943 - - - - - - - 0.943 - CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]
75. hint1 ENSDARG00000103824, ENSDARG00000110789 8302 0.942 - - - - - - - 0.942 - histidine triad nucleotide binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040927-8]
76. porcnl_1 ENSDARG00000052455 683 0.942 - - - - - - - 0.942 - porcupine O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-030131-5931]
77. frmd6 ENSDARG00000002332 2698 0.942 - - - - - - - 0.942 - FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
78. ano10a ENSDARG00000057736 1306 0.942 - - - - - - - 0.942 - anoctamin 10a [Source:ZFIN;Acc:ZDB-GENE-050913-43]
79. smad9 368 0.941 - - - - - - - 0.941 - SMAD family member 9, transcript variant X1
80. si:ch211-165d12.4 ENSDARG00000079353 330 0.941 - - - - - - - 0.941 - si:ch211-165d12.4 [Source:ZFIN;Acc:ZDB-GENE-080303-7]
81. trpm4 trpm4 501 0.941 - - - - - - - 0.941 -
82. ncs1b ENSDARG00000054186 252 0.941 - - - - - - - 0.941 - neuronal calcium sensor 1b [Source:ZFIN;Acc:ZDB-GENE-050930-1]
83. PEG3_38 PEG3_38 521 0.941 - - - - - - - 0.941 -
84. commd4 ENSDARG00000061946 3281 0.941 - - - - - - - 0.941 - COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
85. MRPS12_1 MRPS12_1 2714 0.941 - - - - - - - 0.941 -
86. zgc:174273 zgc:174273 374 0.941 - - - - - - - 0.941 -
87. pacsin2 ENSDARG00000078014 1582 0.941 - - - - - - - 0.941 - protein kinase C and casein kinase substrate in neurons 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2596]
88. ZNF337_3 ZNF337_3 561 0.94 - - - - - - - 0.940 -
89. ARSB ENSDARG00000108788 774 0.94 - - - - - - - 0.940 - arylsulfatase B [Source:HGNC Symbol;Acc:HGNC:714]
90. ddr2l ENSDARG00000103830 1921 0.94 - - - - - - - 0.940 - discoidin domain receptor family, member 2, like [Source:ZFIN;Acc:ZDB-GENE-041210-162]
91. CU694256.1 ENSDARG00000097007 290 0.94 - - - - - - - 0.940 -
92. wipf1 wipf1 760 0.939 - - - - - - - 0.939 -
93. ZBTB11 ENSDARG00000017886 817 0.939 - - - - - - - 0.939 - zinc finger and BTB domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5055]
94. mmp2 ENSDARG00000017676 2347 0.939 - - - - - - - 0.939 - matrix metallopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9123]
95. pknox1.1 ENSDARG00000018765 2149 0.939 - - - - - - - 0.939 - pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
96. ARF5 ENSDARG00000070472, ENSDARG00000115687 6101 0.939 - - - - - - - 0.939 - ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
97. nucb1 ENSDARG00000054833 2009 0.939 - - - - - - - 0.939 - nucleobindin 1 [Source:ZFIN;Acc:ZDB-GENE-060825-222]
98. otud5b ENSDARG00000056840, ENSDARG00000114052 2199 0.938 - - - - - - - 0.938 - OTU deubiquitinase 5b [Source:ZFIN;Acc:ZDB-GENE-040801-50]
99. her9 ENSDARG00000056438, ENSDARG00000115775 3099 0.938 - - - - - - - 0.938 - hairy-related 9 [Source:ZFIN;Acc:ZDB-GENE-011213-1]
100. C19H1orf85 C19H1orf85 1587 0.938 - - - - - - - 0.938 -

There are 673 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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