Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for hif1ab

Gene Name Gene ID Reads Annotation
hif1ab ENSDARG00000034293 10284 hypoxia inducible factor 1 subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-040426-706]










Genes with expression patterns similar to hif1ab

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hif1ab ENSDARG00000034293 10284 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 hypoxia inducible factor 1 subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-040426-706]
2. zgc:77849 ENSDARG00000012458, ENSDARG00000116615 21205 2.661 - 0.966 - - 0.920 0.775 - - - zgc:77849 [Source:ZFIN;Acc:ZDB-GENE-030131-1107]
3. PELP1 ENSDARG00000079313 5771 2.349 0.726 - 0.855 - - - - 0.768 - proline, glutamate and leucine rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-164]
4. ppap2b ppap2b 2900 2.18 - - - - - 0.713 - 0.751 0.716
5. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 1.955 - - 0.966 - - - 0.989 - - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
6. rbm14b ENSDARG00000103834 1597 1.952 - 0.963 - - - - 0.989 - - RNA binding motif protein 14b [Source:ZFIN;Acc:ZDB-GENE-040426-2455]
7. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 1.944 - 0.955 - - - - 0.989 - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
8. ptprsa ENSDARG00000059738, ENSDARG00000110940 7232 1.929 - - - - 0.940 - 0.989 - - protein tyrosine phosphatase, receptor type, s, a [Source:ZFIN;Acc:ZDB-GENE-020107-3]
9. eif4a1b ENSDARG00000003032, ENSDARG00000116907 14301 1.928 - 0.951 - - - - 0.977 - - eukaryotic translation initiation factor 4A1B [Source:ZFIN;Acc:ZDB-GENE-040120-6]
10. slc31a1 ENSDARG00000013961, ENSDARG00000110656 4072 1.926 - 0.937 - - - - 0.989 - - solute carrier family 31 (copper transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040415-3]
11. cks1b ENSDARG00000007971 2739 1.914 - 0.964 - - 0.950 - - - - CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]
12. nkain1 ENSDARG00000006859 1961 1.907 - 0.960 - - 0.947 - - - - sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
13. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.893 - - - - 0.904 - 0.989 - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
14. nr2f5 ENSDARG00000033172 11808 1.852 - - - - - 0.855 0.997 - - nuclear receptor subfamily 2, group F, member 5 [Source:ZFIN;Acc:ZDB-GENE-990415-253]
15. SH3BGRL ENSDARG00000058302 4525 1.844 - - 0.915 - 0.929 - - - - SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
16. ndufs3 ENSDARG00000015385 7790 1.843 - 0.860 - - - - 0.983 - - NADH:ubiquinone oxidoreductase core subunit S3 [Source:ZFIN;Acc:ZDB-GENE-050417-274]
17. cebpg ENSDARG00000036073 3791 1.838 - - 0.849 - - - 0.989 - - CCAAT enhancer binding protein gamma [Source:ZFIN;Acc:ZDB-GENE-020111-5]
18. tomm70a ENSDARG00000029639, ENSDARG00000112054 7715 1.822 - - - - - - 0.989 - 0.833 translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8173]
19. asna1 ENSDARG00000018190 5253 1.805 - 0.963 0.842 - - - - - - arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-040625-120]
20. mrps18a ENSDARG00000024465 5187 1.801 - 0.966 0.835 - - - - - - mitochondrial ribosomal protein S18A [Source:ZFIN;Acc:ZDB-GENE-041210-109]
21. plxnb1b ENSDARG00000017211 4676 1.801 - - 0.856 - 0.945 - - - - plexin b1b [Source:ZFIN;Acc:ZDB-GENE-090812-4]
22. CR954963.1 ENSDARG00000097153 1135 1.8 - - 0.855 - 0.945 - - - -
23. HNRNPA2B1 HNRNPA2B1 14997 1.793 - 0.964 0.829 - - - - - -
24. itgb1bp1 ENSDARG00000007169 2723 1.791 - - 0.850 - 0.941 - - - - integrin beta 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-051113-264]
25. HECW1 HECW1 1531 1.791 - - - - - - 0.989 - 0.802
26. supt16h ENSDARG00000079949 4755 1.787 - - 0.835 - 0.952 - - - - SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
27. acap3a ENSDARG00000075990 9652 1.771 - 0.984 - - - 0.787 - - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1711]
28. wu:fb54a03 wu:fb54a03 1722 1.769 - 0.966 - - - - - - 0.803
29. rapgef2 ENSDARG00000005482 2586 1.75 - 0.965 - - - - - - 0.785 Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
30. lrp1b lrp1b 3216 1.749 - - - - 0.939 - - - 0.810
31. si:dkey-12j5.1 ENSDARG00000089480 3198 1.748 - 0.812 - - 0.936 - - - - si:dkey-12j5.1 [Source:ZFIN;Acc:ZDB-GENE-100922-71]
32. boc ENSDARG00000074335 4832 1.74 - 0.793 - - 0.947 - - - - BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
33. rqcd1 2301 1.739 - - - - 0.946 - - - 0.793 RCD1 required for cell differentiation1 homolog (S. pombe)
34. alyref ENSDARG00000077732 25934 1.739 - - - - - 0.760 0.979 - - Aly/REF export factor [Source:ZFIN;Acc:ZDB-GENE-070928-29]
35. MAF1 ENSDARG00000013122 6899 1.737 - - - - - - 0.989 - 0.748 MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
36. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.73 - - - - 0.945 - - 0.785 - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
37. dap ENSDARG00000000069, ENSDARG00000114419 13155 1.727 - - 0.910 - - - - - 0.817 death-associated protein [Source:ZFIN;Acc:ZDB-GENE-000511-3]
38. aldh3a2b ENSDARG00000029381 2187 1.723 - 0.961 - - - - - - 0.762 aldehyde dehydrogenase 3 family, member A2b [Source:ZFIN;Acc:ZDB-GENE-040912-103]
39. rbp1a rbp1a 9847 1.706 - 0.904 0.802 - - - - - -
40. ypel3 ENSDARG00000055510 1344 1.706 - - - - 0.944 - - - 0.762 yippee-like 3 [Source:ZFIN;Acc:ZDB-GENE-030516-4]
41. tufm ENSDARG00000104173 9292 1.704 - 0.958 - - - - - - 0.746 Tu translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050320-73]
42. ACVR1B ACVR1B 4824 1.699 - - 0.850 - - 0.849 - - -
43. G3BP2 ENSDARG00000014790 9380 1.697 - - - - - 0.708 0.989 - - GTPase activating protein (SH3 domain) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1972]
44. tmpoa ENSDARG00000007315 3638 1.69 - 0.966 - - - - - 0.724 - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
45. dyrk1ab ENSDARG00000023814 1769 1.673 - 0.961 - - - 0.712 - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
46. tfap2a ENSDARG00000059279 3741 1.671 - - 0.847 - - - - - 0.824 transcription factor AP-2 alpha [Source:ZFIN;Acc:ZDB-GENE-011212-6]
47. snrnp70 ENSDARG00000077126 5921 1.659 - - - - 0.950 - - 0.709 - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
48. col4a6 ENSDARG00000052061 8636 1.649 - - - - 0.912 - - - 0.737 collagen, type IV, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-101001-2]
49. atp2b4 5891 1.639 - 0.898 - - - 0.741 - - - ATPase, Ca++ transporting, plasma membrane 4
50. hspa4a ENSDARG00000004754 3439 1.627 - - 0.834 - - - - - 0.793 heat shock protein 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2832]
51. znf827 ENSDARG00000076171 6304 1.621 - - - - - 0.701 0.920 - - zinc finger protein 827 [Source:ZFIN;Acc:ZDB-GENE-080728-3]
52. nipal3 ENSDARG00000021147, ENSDARG00000109606 1058 1.619 - - 0.855 - - - - - 0.764 NIPA like domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040718-379]
53. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 1.612 - - 0.856 - - - - - 0.756 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
54. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.596 - - 0.857 - - 0.739 - - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
55. ect2 ENSDARG00000007278 1193 1.576 - - 0.857 - - - - 0.719 - epithelial cell transforming 2 [Source:ZFIN;Acc:ZDB-GENE-040831-2]
56. copa ENSDARG00000004173 3977 1.541 - - - - - 0.705 - - 0.836 coatomer protein complex, subunit alpha [Source:ZFIN;Acc:ZDB-GENE-020905-2]
57. gtpbp4 ENSDARG00000018961 5323 1.541 - - - - 0.797 0.744 - - - GTP binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5982]
58. f11r f11r 16668 1.541 - - 0.828 - 0.713 - - - -
59. serf2 ENSDARG00000074340, ENSDARG00000117120 21385 1.533 - - - - 0.822 0.711 - - - small EDRK-rich factor 2 [Source:ZFIN;Acc:ZDB-GENE-041108-1]
60. klf6a ENSDARG00000029072 3758 1.517 - - - - - 0.740 - - 0.777 Kruppel-like factor 6a [Source:ZFIN;Acc:ZDB-GENE-021115-9]
61. si:ch211-51e12.7 ENSDARG00000045914 9598 1.51 - - - 0.730 - 0.780 - - - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
62. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 1.502 - - - - 0.790 - - 0.712 - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
63. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 1.488 - - - - - 0.740 - - 0.748 heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
64. ywhaqb ENSDARG00000023323 28138 1.487 - - - - 0.746 0.741 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-030131-7135]
65. rpl22l1 ENSDARG00000010244 36262 1.476 - - - - 0.721 - 0.755 - - ribosomal protein L22-like 1 [Source:ZFIN;Acc:ZDB-GENE-060804-3]
66. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 1.474 - - - - - 0.716 - - 0.758 thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
67. psma5 ENSDARG00000003526, ENSDARG00000116794 5106 0.998 - - - - - - 0.998 - - proteasome subunit alpha 5 [Source:ZFIN;Acc:ZDB-GENE-040625-96]
68. prdx6 ENSDARG00000043511, ENSDARG00000116085 3456 0.998 - - - - - - 0.998 - - peroxiredoxin 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1778]
69. ing4 ENSDARG00000030716 5908 0.998 - - - - - - 0.998 - - inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
70. atp5mf ENSDARG00000037867 11052 0.996 - - - - - - 0.996 - - ATP synthase membrane subunit f [Source:ZFIN;Acc:ZDB-GENE-050309-87]
71. smcr7a smcr7a 1356 0.989 - - - - - - 0.989 - -
72. C18H12orf23 C18H12orf23 5362 0.989 - - - - - - 0.989 - -
73. TMEM255A ENSDARG00000073911 924 0.989 - - - - - - 0.989 - - transmembrane protein 255A [Source:ZFIN;Acc:ZDB-GENE-070412-2]
74. map2k4b ENSDARG00000077177 1869 0.989 - - - - - - 0.989 - - mitogen-activated protein kinase kinase 4b [Source:ZFIN;Acc:ZDB-GENE-080721-13]
75. dap3 ENSDARG00000078500 2724 0.989 - - - - - - 0.989 - - death associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-051129-2]
76. BOLA2B BOLA2B 2957 0.989 - - - - - - 0.989 - -
77. LURAP1 ENSDARG00000044406, ENSDARG00000115301 938 0.989 - - - - - - 0.989 - - leucine rich adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-35]
78. anxa11a ENSDARG00000077383 4076 0.989 - - - - - - 0.989 - - annexin A11a [Source:ZFIN;Acc:ZDB-GENE-030707-4]
79. rbmx2 ENSDARG00000044380, ENSDARG00000115698 2528 0.989 - - - - - - 0.989 - - RNA binding motif protein X-linked 2 [Source:ZFIN;Acc:ZDB-GENE-050626-88]
80. kiaa0907 1674 0.989 - - - - - - 0.989 - - KIAA0907 protein, transcript variant X7
81. gid8b ENSDARG00000037589 2121 0.989 - - - - - - 0.989 - - GID complex subunit 8 homolog b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030515-4]
82. aplp1 ENSDARG00000098368 2317 0.989 - - - - - - 0.989 - - amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
83. btbd3a ENSDARG00000005544 595 0.989 - - - - - - 0.989 - - BTB (POZ) domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-090312-7]
84. znf740 znf740 2458 0.989 - - - - - - 0.989 - -
85. wu:fj05h12 wu:fj05h12 6166 0.989 - - - - - - 0.989 - -
86. nkd1 ENSDARG00000020053 4450 0.989 - - - - - - 0.989 - - naked cuticle homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-061108-3]
87. LRIG3 ENSDARG00000079363 909 0.989 - - - - - - 0.989 - - leucine-rich repeats and immunoglobulin-like domains 3 [Source:ZFIN;Acc:ZDB-GENE-130530-866]
88. mapk14b ENSDARG00000028721 1486 0.989 - - - - - - 0.989 - - mitogen-activated protein kinase 14b [Source:ZFIN;Acc:ZDB-GENE-021007-1]
89. spred2a ENSDARG00000052435 1624 0.989 - - - - - - 0.989 - - sprouty-related, EVH1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-110830-2]
90. med1 ENSDARG00000075340 2421 0.989 - - - - - - 0.989 - - mediator complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081104-257]
91. prrc2c ENSDARG00000057583, ENSDARG00000116399 1673 0.989 - - - - - - 0.989 - - proline-rich coiled-coil 2C [Source:ZFIN;Acc:ZDB-GENE-081104-156]
92. dcaf17 ENSDARG00000074909 913 0.989 - - - - - - 0.989 - - ddb1 and cul4 associated factor 17 [Source:ZFIN;Acc:ZDB-GENE-071008-1]
93. zc3hc1 ENSDARG00000062651 1552 0.989 - - - - - - 0.989 - - zinc finger, C3HC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-061013-94]
94. shroom1 ENSDARG00000094181 2325 0.989 - - - - - - 0.989 - - shroom family member 1 [Source:ZFIN;Acc:ZDB-GENE-091204-385]
95. dtna ENSDARG00000031015 1746 0.989 - - - - - - 0.989 - - dystrobrevin, alpha [Source:ZFIN;Acc:ZDB-GENE-070117-2]
96. gcdh gcdh 1390 0.989 - - - - - - 0.989 - -
97. atp1a3a ENSDARG00000018259 5393 0.989 - - - - - - 0.989 - - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
98. ACVR2B 6615 0.989 - - - - - - 0.989 - - activin A receptor, type IIB
99. dhps ENSDARG00000003270 827 0.989 - - - - - - 0.989 - - deoxyhypusine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2001]
100. kpna2 ENSDARG00000038066 7954 0.988 - - - - - - 0.988 - - karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]

There are 946 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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