Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for hhip

Gene Name Gene ID Reads Annotation
hhip ENSDARG00000060397, ENSDARG00000111482, ENSDARG00000111668 3025 hedgehog interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4827]










Genes with expression patterns similar to hhip

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hhip ENSDARG00000060397, ENSDARG00000111482, ENSDARG00000111668 3025 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 hedgehog interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4827]
2. BX323459.1 ENSDARG00000109508 1476 2.43 0.785 - - - - 0.816 0.829 - -
3. pi15a ENSDARG00000045378 2361 2.355 - - - - - 0.870 0.710 - 0.775 peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
4. nkx3.2 ENSDARG00000037639 575 1.735 - - - - - 0.846 0.889 - - NK3 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030127-1]
5. plcl1 ENSDARG00000067676 2457 1.697 - - - - - 0.819 0.878 - - phospholipase C like 1 [Source:ZFIN;Acc:ZDB-GENE-090313-194]
6. tgfb3 ENSDARG00000019367 2327 1.678 - - - - - 0.816 0.862 - - transforming growth factor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-030723-4]
7. aqp4 ENSDARG00000010565 624 1.658 - - - - - 0.856 0.802 - - aquaporin 4 [Source:ZFIN;Acc:ZDB-GENE-040724-152]
8. tppp3 ENSDARG00000030463 992 1.643 - - - - - 0.767 0.876 - - tubulin polymerization-promoting protein family member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1909]
9. fam46bb 601 1.631 - - - - - 0.848 0.783 - - family with sequence similarity 46, member Bb
10. ntd5 ENSDARG00000040944 4988 1.629 - - - - - 0.853 0.776 - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
11. scara3 ENSDARG00000008060 169 1.626 - - - - - 0.812 0.814 - - scavenger receptor class A, member 3 [Source:ZFIN;Acc:ZDB-GENE-041014-317]
12. BX842614.2 BX842614.2 799 1.623 - - - - - 0.829 0.794 - -
13. chad ENSDARG00000045071 903 1.621 - - - - - 0.821 0.800 - - chondroadherin [Source:ZFIN;Acc:ZDB-GENE-040426-1130]
14. vwde ENSDARG00000103443 5758 1.617 - - - - - 0.807 0.810 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
15. CR792456.1 CR792456.1 783 1.617 - - - - - 0.819 0.798 - -
16. col9a3 ENSDARG00000037845 6564 1.607 - - - - - 0.859 0.748 - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
17. TENC1 TENC1 1729 1.604 - - - - - 0.815 0.789 - -
18. hspb9 ENSDARG00000078674 2755 1.602 - 0.837 - - - - 0.765 - - heat shock protein, alpha-crystallin-related, 9 [Source:ZFIN;Acc:ZDB-GENE-080214-6]
19. ctgfa ENSDARG00000042934, ENSDARG00000112741 2123 1.602 0.712 - - - - - 0.890 - - connective tissue growth factor a [Source:ZFIN;Acc:ZDB-GENE-030131-102]
20. shha ENSDARG00000068567, ENSDARG00000111447 1497 1.6 - - - - - 0.749 0.851 - - sonic hedgehog a [Source:ZFIN;Acc:ZDB-GENE-980526-166]
21. plod1a ENSDARG00000059746 3364 1.597 - - - - - 0.816 0.781 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3165]
22. gspt1 ENSDARG00000031048, ENSDARG00000109388 2735 1.591 - 0.822 - - - 0.769 - - - G1 to S phase transition 1 [Source:ZFIN;Acc:ZDB-GENE-040822-36]
23. slc30a9 ENSDARG00000057272 766 1.59 - 0.756 - - - 0.834 - - - solute carrier family 30 (zinc transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-040724-254]
24. tgfbi ENSDARG00000071586 17779 1.585 - - - - - 0.853 0.732 - - transforming growth factor, beta-induced [Source:ZFIN;Acc:ZDB-GENE-030131-73]
25. CU928220.1 CU928220.1 146 1.581 - - - - - 0.748 0.833 - -
26. myhc4 ENSDARG00000035438 1322 1.581 - - - - - 0.831 0.750 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
27. COLGALT2 ENSDARG00000014670 63 1.58 - - - - - 0.830 0.750 - - collagen beta(1-O)galactosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070222-1]
28. sncga ENSDARG00000034423, ENSDARG00000112260 5469 1.572 - - - - - 0.793 0.779 - - synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]
29. nme6 ENSDARG00000016138 207 1.572 - 0.798 - - - - 0.774 - - NME/NM23 nucleoside diphosphate kinase 6 [Source:ZFIN;Acc:ZDB-GENE-000710-3]
30. CABZ01079764.1 CABZ01079764.1 12103 1.57 - - - - - 0.814 0.756 - -
31. cthrc1a ENSDARG00000087198 1001 1.565 - - - - - 0.751 0.814 - - collagen triple helix repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-040808-22]
32. ntla ntla 926 1.564 - - - - - 0.799 0.765 - -
33. pcdh18b ENSDARG00000052494, ENSDARG00000116134 1099 1.558 - - - - - 0.734 0.824 - - protocadherin 18b [Source:ZFIN;Acc:ZDB-GENE-080804-1]
34. CABZ01044297.1 CABZ01044297.1 2015 1.556 - - - - - 0.827 0.729 - -
35. cdc42ep3 ENSDARG00000052783 1485 1.546 - 0.796 - - - 0.750 - - - CDC42 effector protein (Rho GTPase binding) 3 [Source:ZFIN;Acc:ZDB-GENE-040912-89]
36. lgals2a ENSDARG00000054942 888 1.546 - - - - - 0.781 0.765 - - lectin, galactoside-binding, soluble, 2a [Source:ZFIN;Acc:ZDB-GENE-050318-2]
37. si:dkeyp-118a3.2 ENSDARG00000086957 2106 1.545 - - - - - 0.787 0.758 - - si:dkeyp-118a3.2 [Source:ZFIN;Acc:ZDB-GENE-060810-149]
38. crip2 ENSDARG00000070670 4844 1.544 - - - - - 0.794 0.750 - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
39. CABZ01080590.2 CABZ01080590.2 2038 1.538 - 0.819 - - - - 0.719 - -
40. crcp ENSDARG00000069373 730 1.537 - 0.780 - - - 0.757 - - - calcitonin gene-related peptide-receptor component protein [Source:ZFIN;Acc:ZDB-GENE-060825-150]
41. PAQR4 PAQR4 2150 1.533 - - - - - 0.756 0.777 - -
42. si:ch211-152c2.3 ENSDARG00000045898 3448 1.532 - - - - - 0.763 0.769 - - si:ch211-152c2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9914]
43. sptb ENSDARG00000030490 7128 1.532 - - - - - 0.799 0.733 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
44. ryr3 ENSDARG00000071331 6795 1.531 - - - - - 0.829 0.702 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
45. si:dkeyp-12a9.5 3058 1.53 - - - - - 0.802 0.728 - - si:dkeyp-12a9.5
46. susd5 ENSDARG00000088277 439 1.526 - - - - - 0.795 0.731 - - sushi domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-120215-196]
47. epyc ENSDARG00000056950 7783 1.525 - - - - - 0.772 0.753 - - epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
48. smyd1a ENSDARG00000009280 1503 1.523 - - - - - 0.728 0.795 - - SET and MYND domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9825]
49. prkg1a ENSDARG00000020656 918 1.521 - 0.732 - - - 0.789 - - - protein kinase cGMP-dependent 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1308]
50. CR392006.1 CR392006.1 1401 1.52 - - - - - 0.730 0.790 - -
51. lrig1 ENSDARG00000075625 2027 1.518 - 0.812 - - - - 0.706 - - leucine-rich repeats and immunoglobulin-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-031113-23]
52. eng1a eng1a 484 1.518 - - - - - 0.797 0.721 - -
53. plod2 ENSDARG00000011821 1656 1.513 - - - - - 0.765 0.748 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
54. AKAP2 AKAP2 4178 1.511 - - - - - 0.745 - - 0.766
55. srpx ENSDARG00000010318 946 1.507 - 0.707 - - - - 0.800 - - sushi-repeat containing protein X-linked [Source:ZFIN;Acc:ZDB-GENE-050327-43]
56. CR847510.1 CR847510.1 629 1.501 - - - - - 0.757 0.744 - -
57. mef2aa ENSDARG00000031756 2699 1.5 - - - - - 0.715 0.785 - - myocyte enhancer factor 2aa [Source:ZFIN;Acc:ZDB-GENE-990415-163]
58. eprs ENSDARG00000060494 4729 1.499 - 0.791 - - - - 0.708 - - glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
59. mkxa ENSDARG00000075450, ENSDARG00000114299 233 1.498 - - - - - 0.782 0.716 - - mohawk homeobox a [Source:ZFIN;Acc:ZDB-GENE-080513-1]
60. tnnc1b ENSDARG00000037539 13945 1.496 - - - - - 0.715 0.781 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
61. CU469518.1 CU469518.1 214 1.493 - - - - - 0.766 0.727 - -
62. ywhae2 ENSDARG00000017014 5105 1.491 - 0.750 - - - - 0.741 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050306-44]
63. ism1 ENSDARG00000020541 1241 1.49 - - - - - 0.759 0.731 - - isthmin 1 [Source:ZFIN;Acc:ZDB-GENE-050523-3]
64. twf2a ENSDARG00000094792 687 1.49 - - - - - 0.757 0.733 - - twinfilin actin-binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7638]
65. cx43 ENSDARG00000041799 2212 1.489 - - - - - - 0.735 - 0.754 connexin 43 [Source:ZFIN;Acc:ZDB-GENE-991105-4]
66. spry4 ENSDARG00000068732 2091 1.484 - 0.779 - - - - - - 0.705 sprouty homolog 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010803-2]
67. smpx ENSDARG00000045302 2175 1.479 - - - - - 0.766 0.713 - - small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
68. asb12b ENSDARG00000037558, ENSDARG00000113049, ENSDARG00000116721 378 1.478 - - - - - 0.760 0.718 - - ankyrin repeat and SOCS box-containing 12b [Source:ZFIN;Acc:ZDB-GENE-040822-25]
69. plxnb1a ENSDARG00000075821 1702 1.477 - 0.736 - - - - 0.741 - - plexin b1a [Source:ZFIN;Acc:ZDB-GENE-050302-63]
70. kctd12.1 ENSDARG00000069843, ENSDARG00000113802 141 1.475 - - - - - 0.763 0.712 - - potassium channel tetramerisation domain containing 12.1 [Source:ZFIN;Acc:ZDB-GENE-030902-5]
71. nexn ENSDARG00000057317 10972 1.463 - - - - - 0.703 0.760 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
72. si:ch211-120p12.3 1079 1.461 - 0.704 - 0.757 - - - - - si:ch211-120p12.3, transcript variant X2
73. CABZ01097761.1 ENSDARG00000116119 445 1.459 - - - - - 0.702 0.757 - - dual specificity protein phosphatase 13-like [Source:NCBI gene;Acc:100537679]
74. bnip3la ENSDARG00000025468 3097 1.457 - 0.738 - 0.719 - - - - - BCL2 interacting protein 3 like a [Source:ZFIN;Acc:ZDB-GENE-030131-2283]
75. STIM2 STIM2 644 1.456 - - - - - 0.747 0.709 - -
76. ppapdc3 ppapdc3 4924 1.453 - - - - - 0.737 0.716 - -
77. acana ENSDARG00000035891 118 1.449 - - - - - 0.735 0.714 - - aggrecan a [Source:ZFIN;Acc:ZDB-GENE-050208-221]
78. skiv2l ENSDARG00000062206 268 1.443 - 0.703 - - - - 0.740 - - SKI2 homolog, superkiller viralicidic activity 2-like [Source:ZFIN;Acc:ZDB-GENE-010430-5]
79. zgc:92518 ENSDARG00000016343 3837 1.44 - - - - - 0.735 0.705 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
80. smtnl1 ENSDARG00000041257 7410 1.44 - - - - - 0.723 0.717 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
81. ptch2 ENSDARG00000055026 980 1.438 - - - - - 0.706 0.732 - - patched 2 [Source:ZFIN;Acc:ZDB-GENE-980526-44]
82. FRMD5 ENSDARG00000075942 569 1.432 - - - - - 0.704 0.728 - - FERM domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28214]
83. slc2a11b ENSDARG00000063288, ENSDARG00000113273 2478 0.9 - - - - - - 0.900 - - solute carrier family 2 (facilitated glucose transporter), member 11b [Source:ZFIN;Acc:ZDB-GENE-070705-96]
84. ZBTB16 ZBTB16 3385 0.897 - 0.897 - - - - - - -
85. wwp2 ENSDARG00000061345 3459 0.887 - 0.887 - - - - - - - WW domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-000607-82]
86. ST7 ENSDARG00000039960, ENSDARG00000112691 2020 0.875 - - - - - - 0.875 - - suppression of tumorigenicity 7 [Source:ZFIN;Acc:ZDB-GENE-060421-2807]
87. ddx56 ENSDARG00000020913 1070 0.874 - 0.874 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 56 [Source:ZFIN;Acc:ZDB-GENE-040825-3]
88. zgc:86725 2559 0.873 - - - - - 0.873 - - - zgc:86725
89. six2b ENSDARG00000054878 567 0.871 - - - - - - 0.871 - - SIX homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080723-23]
90. krt15 ENSDARG00000036840, ENSDARG00000111896 580 0.867 - - - - - - 0.867 - - keratin 15 [Source:ZFIN;Acc:ZDB-GENE-040426-2931]
91. MCAM MCAM 1765 0.864 - - - - - - 0.864 - -
92. myh7bb ENSDARG00000035322 287 0.864 - - - - - - 0.864 - - myosin, heavy chain 7B, cardiac muscle, beta b [Source:ZFIN;Acc:ZDB-GENE-090311-5]
93. bcs1l ENSDARG00000012295 664 0.861 - 0.861 - - - - - - - BC1 (ubiquinol-cytochrome c reductase) synthesis-like [Source:ZFIN;Acc:ZDB-GENE-040426-938]
94. brd1b ENSDARG00000051798 1712 0.861 - 0.861 - - - - - - - bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
95. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 0.86 - 0.860 - - - - - - - leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
96. rb1 ENSDARG00000006782 1445 0.86 - 0.860 - - - - - - - retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]
97. loxl2b ENSDARG00000044074 1919 0.858 - 0.858 - - - - - - - lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]
98. CR548630.1 CR548630.1 3301 0.857 - 0.857 - - - - - - -
99. atf3 ENSDARG00000007823 829 0.857 - - - - - - 0.857 - - activating transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-728]
100. sox7 ENSDARG00000030125 806 0.857 - 0.857 - - - - - - - SRY (sex determining region Y)-box 7 [Source:ZFIN;Acc:ZDB-GENE-040109-4]

There are 766 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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