Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for hfm1

Gene Name Gene ID Reads Annotation
hfm1 ENSDARG00000104288 9 HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061207-43]










Genes with expression patterns similar to hfm1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. hfm1 ENSDARG00000104288 9 5 - - 1.000 1.000 1.000 - 1.000 - 1.000 HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061207-43]
2. si:dkey-240n22.6 ENSDARG00000089296, ENSDARG00000106998 3 2 - - 1.000 - 1.000 - - - - si:dkey-240n22.6 [Source:ZFIN;Acc:ZDB-GENE-070705-411]
3. BX649431.1 ENSDARG00000098522 13 1.972 - - 1.000 - - - 0.972 - -
4. si:dkey-122c11.7 ENSDARG00000103721 3 1.777 - - 0.777 - 1.000 - - - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
5. CU928217.1 CU928217.1 12 1.773 - - - - - - 0.975 - 0.798
6. cth1 ENSDARG00000057328 13 1.742 - - 1.000 - 0.742 - - - - cysteine three histidine 1 [Source:ZFIN;Acc:ZDB-GENE-990806-20]
7. C3AR1 18 1.732 - - - - - - 0.982 - 0.750 C3a anaphylatoxin chemotactic receptor
8. lyve1a ENSDARG00000075833 25 1.619 - - 0.847 - 0.772 - - - - lymphatic vessel endothelial hyaluronic receptor 1a [Source:ZFIN;Acc:ZDB-GENE-031118-138]
9. fbn2a ENSDARG00000051896 2 1 - - 1.000 - - - - - - fibrillin 2a [Source:ZFIN;Acc:ZDB-GENE-090112-4]
10. ttll3 ENSDARG00000053728 7 1 - - - - - - 1.000 - - tubulin tyrosine ligase-like family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-182]
11. si:ch73-167f18.4 si:ch73-167f18.4 9 1 - - 1.000 - - - - - -
12. si:dkey-106l3.6 0 1 - - 1.000 - - - - - - si:dkey-106l3.6
13. pth1b ENSDARG00000091961, ENSDARG00000115353 5 1 - - 1.000 - - - - - - parathyroid hormone 1b [Source:ZFIN;Acc:ZDB-GENE-040623-2]
14. BMP10 ENSDARG00000061769 3 1 - - 1.000 - - - - - - bone morphogenetic protein 10 [Source:ZFIN;Acc:ZDB-GENE-060526-211]
15. RBBP6_3 RBBP6_3 34 1 - - 1.000 - - - - - -
16. si:dkeyp-69b9.4 si:dkeyp-69b9.4 0 1 - - 1.000 - - - - - -
17. cabp2a ENSDARG00000052016 19 1 - - - - 1.000 - - - - calcium binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050913-25]
18. zgc:173737 ENSDARG00000058299 6 1 - - - - - - 1.000 - - zgc:173737 [Source:ZFIN;Acc:ZDB-GENE-071004-109]
19. si:ch211-163m16.2 si:ch211-163m16.2 1 1 - - 1.000 - - - - - -
20. flnb ENSDARG00000092281 10 1 - - 1.000 - - - - - - filamin B, beta (actin binding protein 278) [Source:ZFIN;Acc:ZDB-GENE-041026-1]
21. C3_3 C3_3 2 1 - - - - - - 1.000 - -
22. abcc5 ENSDARG00000061233 60 1 - - - - - - 1.000 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 5 [Source:ZFIN;Acc:ZDB-GENE-050517-17]
23. SLC5A10 ENSDARG00000074212 11 1 - - - - 1.000 - - - - solute carrier family 5 member 10 [Source:HGNC Symbol;Acc:HGNC:23155]
24. PLA2G4C_2 PLA2G4C_2 10 1 - - - - - - 1.000 - -
25. crygm2d9 ENSDARG00000115701 28 1 - - 1.000 - - - - - - crystallin, gamma M2d9 [Source:ZFIN;Acc:ZDB-GENE-081105-81]
26. lim2.5 ENSDARG00000041295 56 1 - - 1.000 - - - - - - lens intrinsic membrane protein 2.5 [Source:ZFIN;Acc:ZDB-GENE-050320-94]
27. zgc:123284 ENSDARG00000102720 1 1 - - - - 1.000 - - - - zgc:123284 [Source:ZFIN;Acc:ZDB-GENE-051113-92]
28. jupb ENSDARG00000059067 1 1 - - - - 1.000 - - - - junction plakoglobin b [Source:ZFIN;Acc:ZDB-GENE-110407-10]
29. eng2b eng2b 865 1 - - - - - - 1.000 - -
30. zbtb16a ENSDARG00000007184 6 1 - - 1.000 - - - - - - zinc finger and BTB domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-030131-1989]
31. cyp1c2 ENSDARG00000101789 3 1 - - - - 1.000 - - - - cytochrome P450, family 1, subfamily C, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050705-1]
32. chia.6 ENSDARG00000093193, ENSDARG00000116259 25 1 - - - - - - 1.000 - - chitinase, acidic.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1140]
33. FLVCR2 FLVCR2 5 1 - - - - - - 1.000 - -
34. si:dkey-237i9.8 ENSDARG00000103020 3 1 - - 1.000 - - - - - - si:dkey-237i9.8 [Source:ZFIN;Acc:ZDB-GENE-120215-145]
35. tmem196b ENSDARG00000090140 20 1 - - - - 1.000 - - - - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
36. BX000348.1 BX000348.1 2 1 - - 1.000 - - - - - -
37. si:ch211-229d2.5 ENSDARG00000079119 95 1 - - - - 1.000 - - - - si:ch211-229d2.5 [Source:ZFIN;Acc:ZDB-GENE-121214-200]
38. wibg wibg 2 1 - - 1.000 - - - - - -
39. si:dkey-2j6.2 si:dkey-2j6.2 5 1 - - 1.000 - - - - - -
40. zmat4a ENSDARG00000092987, ENSDARG00000111611 1 1 - - 1.000 - - - - - - zinc finger, matrin-type 4a [Source:ZFIN;Acc:ZDB-GENE-081104-333]
41. si:dkeyp-82h4.1 ENSDARG00000096463 18 1 - - - - 1.000 - - - - si:dkeyp-82h4.1 [Source:ZFIN;Acc:ZDB-GENE-120709-49]
42. PIP4K2C PIP4K2C 5 1 - - - - - - 1.000 - -
43. chrnb3b ENSDARG00000038508 7 1 - - - - 1.000 - - - - cholinergic receptor, nicotinic, beta 3b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-030102-4]
44. FAIM2 FAIM2 43 1 - - - - - - 1.000 - -
45. cnn1a ENSDARG00000017193 6 1 - - 1.000 - - - - - - calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
46. crygm2d7 ENSDARG00000076572, ENSDARG00000116634 229 1 - - 1.000 - - - - - - crystallin, gamma M2d7 [Source:ZFIN;Acc:ZDB-GENE-060918-5]
47. ATXN1L ENSDARG00000086977 4 1 - - 1.000 - - - - - - ataxin 1-like [Source:ZFIN;Acc:ZDB-GENE-090908-1]
48. angptl6 ENSDARG00000020265 273 1 - - - - - - 1.000 - - angiopoietin-like 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9735]
49. si:dkeyp-72g6.3 si:dkeyp-72g6.3 2 1 - - 1.000 - - - - - -
50. ATP6V1C2 ENSDARG00000070440 2 1 - - - - 1.000 - - - - ATPase H+ transporting V1 subunit C2 [Source:ZFIN;Acc:ZDB-GENE-131127-65]
51. kiss2 ENSDARG00000077985 2 1 - - 1.000 - - - - - - kisspeptin 2 [Source:ZFIN;Acc:ZDB-GENE-090526-1]
52. si:ch211-198f4.4 si:ch211-198f4.4 1 1 - - - - 1.000 - - - -
53. scn1a_1 2 1 - - 1.000 - - - - - - sodium channel, voltage-gated, type I, alpha, transcript variant X1
54. si:ch211-226f6.1 ENSDARG00000094038 1 1 - - - - 1.000 - - - - si:ch211-226f6.1 [Source:ZFIN;Acc:ZDB-GENE-070912-217]
55. si:dkey-233e3.2 3 1 - - 1.000 - - - - - - si:dkey-233e3.2, transcript variant X1
56. PLCXD1_2 PLCXD1_2 9 1 - - 1.000 - - - - - -
57. BX255935.2 BX255935.2 0 1 - - 1.000 - - - - - -
58. TNFRSF14_7 TNFRSF14_7 0 1 - - 1.000 - - - - - -
59. si:dkey-46c2.2 si:dkey-46c2.2 2 1 - - 1.000 - - - - - -
60. mrap ENSDARG00000091992 9 1 - - 1.000 - - - - - - melanocortin 2 receptor accessory protein [Source:ZFIN;Acc:ZDB-GENE-060503-387]
61. fndc7 fndc7 3 1 - - - - 1.000 - - - -
62. si:ch211-122l14.7 ENSDARG00000095576 5 1 - - - - 1.000 - - - - si:ch211-122l14.7 [Source:ZFIN;Acc:ZDB-GENE-041014-263]
63. BX005356.3 BX005356.3 4 1 - - 1.000 - - - - - -
64. si:ch211-64i20.4 si:ch211-64i20.4 3 1 - - - - - - 1.000 - -
65. Metazoa_SRP_12 Metazoa_SRP_12 1 1 - - - - 1.000 - - - -
66. si:dkey-233e3.4 si:dkey-233e3.4 3 1 - - - - 1.000 - - - -
67. CU633740.2 CU633740.2 16 1 - - - - 1.000 - - - -
68. crygmxl1 ENSDARG00000018797 7 1 - - 1.000 - - - - - - crystallin, gamma MX, like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-392]
69. CABZ01049362.1 ENSDARG00000099508 570 1 - - - - - - 1.000 - -
70. asb10 ENSDARG00000099461 27 1 - - 1.000 - - - - - - ankyrin repeat and SOCS box containing 10 [Source:ZFIN;Acc:ZDB-GENE-060929-1106]
71. pstpip1b ENSDARG00000053568, ENSDARG00000116801 0 1 - - 1.000 - - - - - - proline-serine-threonine phosphatase interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-051127-25]
72. si:dkey-84h14.3 si:dkey-84h14.3 3 1 - - 1.000 - - - - - -
73. wwox ENSDARG00000007614 0 1 - - 1.000 - - - - - - WW domain containing oxidoreductase [Source:ZFIN;Acc:ZDB-GENE-040426-858]
74. CU896602.1 ENSDARG00000071461 1 1 - - - - 1.000 - - - -
75. ENSDARG00000043008 ENSDARG00000043008 8 1 - - - - - - 1.000 - -
76. nabp1b ENSDARG00000043685 5 1 - - 1.000 - - - - - - nucleic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-050913-74]
77. si:dkey-9a20.8 si:dkey-9a20.8 8 1 - - 1.000 - - - - - -
78. si:ch211-13b16.1 si:ch211-13b16.1 1 1 - - 1.000 - - - - - -
79. cyp2k19 ENSDARG00000101861 129 1 - - - - 1.000 - - - - cytochrome P450, family 2, subfamily k, polypeptide 19 [Source:ZFIN;Acc:ZDB-GENE-091211-1]
80. MAZ MAZ 42 1 - - - - - - 1.000 - -
81. si:ch73-122g19.1 ENSDARG00000069323 2 1 - - - - 1.000 - - - - si:ch73-122g19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-239]
82. zgc:162180 zgc:162180 31 1 - - - - - - 1.000 - -
83. st3gal1 ENSDARG00000079654 4 1 - - 1.000 - - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060321-1]
84. SYCP2L 3 1 - - - - - - 1.000 - - synaptonemal complex protein 2-like, transcript variant X3
85. hsf4 ENSDARG00000013251 5 1 - - - - - - 1.000 - - heat shock transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-050306-18]
86. si:dkey-42h23.2 si:dkey-42h23.2 1 1 - - - - - - 1.000 - -
87. si:dkey-79i2.4 ENSDARG00000094710 1 1 - - - - 1.000 - - - - si:dkey-79i2.4 [Source:ZFIN;Acc:ZDB-GENE-060503-553]
88. CABZ01049058.1 CABZ01049058.1 7 1 - - 1.000 - - - - - -
89. 5S_rRNA_24 5S_rRNA_24 0 1 - - 1.000 - - - - - -
90. si:dkey-11o1.3 ENSDARG00000093279 2 1 - - - - - - 1.000 - - si:dkey-11o1.3 [Source:ZFIN;Acc:ZDB-GENE-100921-37]
91. FP102163.1 FP102163.1 1 1 - - - - - - 1.000 - -
92. CU652893.1 ENSDARG00000104131 3 1 - - 1.000 - - - - - -
93. si:ch73-155e10.1 si:ch73-155e10.1 13 1 - - - - - - 1.000 - -
94. si:ch211-165f21.6 si:ch211-165f21.6 5 1 - - 1.000 - - - - - -
95. si:dkey-109j17.5 ENSDARG00000104891 2 1 - - 1.000 - - - - - - si:dkey-109j17.5 [Source:ZFIN;Acc:ZDB-GENE-090313-173]
96. HIST1H2BA_1 ENSDARG00000116654 37 1 - - - - - - 1.000 - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
97. si:dkey-17e6.1 si:dkey-17e6.1 1 1 - - 1.000 - - - - - -
98. si:ch211-222b21.5 si:ch211-222b21.5 10 1 - - - - - - 1.000 - -
99. ghrl ENSDARG00000054239 4 1 - - - - 1.000 - - - - ghrelin/obestatin prepropeptide [Source:ZFIN;Acc:ZDB-GENE-070622-2]
100. TSG101_2 TSG101_2 1 1 - - - - - - 1.000 - -

There are 491 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA