Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for her9

Gene Name Gene ID Reads Annotation
her9 ENSDARG00000056438, ENSDARG00000115775 3099 hairy-related 9 [Source:ZFIN;Acc:ZDB-GENE-011213-1]










Genes with expression patterns similar to her9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. her9 ENSDARG00000056438, ENSDARG00000115775 3099 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 hairy-related 9 [Source:ZFIN;Acc:ZDB-GENE-011213-1]
2. dut ENSDARG00000106529 3120 3.041 - 0.712 - 0.730 0.812 - 0.787 - - deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
3. prx ENSDARG00000017246 6183 2.541 0.738 0.824 - - - 0.979 - - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
4. TMPO TMPO 3264 2.534 0.738 0.811 - - - 0.985 - - -
5. srl ENSDARG00000104587 11126 2.531 0.738 0.827 - - - 0.966 - - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
6. eef2l2 ENSDARG00000035256 6815 2.517 0.755 0.856 - - - 0.906 - - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
7. irx3a ENSDARG00000101076 3106 2.493 0.754 - - - 0.745 0.994 - - - iroquois homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-991119-5]
8. fbxw5 ENSDARG00000099139 2802 2.475 0.748 0.729 - - - 0.998 - - - F-box and WD repeat domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2571]
9. grpel2 ENSDARG00000069421 5673 2.415 0.708 0.834 - - - 0.873 - - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
10. myod1 ENSDARG00000030110 6019 2.414 0.720 0.830 - - - - - 0.864 - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
11. mybpc2b ENSDARG00000021265 9618 2.358 0.786 0.843 - - - 0.729 - - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
12. uba1 ENSDARG00000037559 11579 2.353 0.734 - - 0.805 - - - 0.814 - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
13. SNRPG ENSDARG00000099667 18697 2.33 - 0.721 - - - - 0.758 0.851 - small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
14. PHB2 PHB2 3755 2.214 0.764 0.739 - - - 0.711 - - -
15. fam60al 2846 2.159 0.729 - 0.711 0.719 - - - - - family with sequence similarity 60, member A, like
16. si:dkey-118j18.2 ENSDARG00000096457 5293 1.933 - - - - - 0.989 - 0.944 - si:dkey-118j18.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8692]
17. pdha1a ENSDARG00000012387, ENSDARG00000116841 8358 1.858 - - - - - 0.964 - 0.894 - pyruvate dehydrogenase E1 alpha 1 subunit a [Source:ZFIN;Acc:ZDB-GENE-040426-2719]
18. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.838 - 0.844 - - - 0.994 - - -
19. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.825 - 0.833 - - - 0.992 - - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
20. hapln1a ENSDARG00000089769 12334 1.823 - 0.892 - - - 0.931 - - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
21. PCBP4 ENSDARG00000024276 3194 1.81 - 0.814 - - - 0.996 - - - poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
22. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 1.807 0.839 - - - - - - 0.968 - discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
23. slc25a12 ENSDARG00000102362 2773 1.779 - 0.782 - - - 0.997 - - - solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:ZFIN;Acc:ZDB-GENE-031006-11]
24. Sep-06 Sep-06 5465 1.765 - 0.772 - - - 0.993 - - -
25. CCDC86 CCDC86 2023 1.759 - 0.764 - - - 0.995 - - -
26. efemp2a ENSDARG00000094324 39261 1.746 0.747 - - - - 0.999 - - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
27. KDM6B KDM6B 10265 1.745 - - - - - 0.908 - 0.837 -
28. PEG3_38 PEG3_38 521 1.744 0.758 - - - - - - 0.986 -
29. frmd6 ENSDARG00000002332 2698 1.742 - 0.756 - - - - - 0.986 - FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
30. atp5h 18018 1.738 - 0.785 - - - - - 0.953 - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
31. cbsa ENSDARG00000053500, ENSDARG00000112676 792 1.731 - 0.732 - - - 0.999 - - - cystathionine-beta-synthase a [Source:ZFIN;Acc:ZDB-GENE-050417-367]
32. timm8b ENSDARG00000055708 7291 1.722 - 0.751 - - - 0.971 - - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
33. limch1a ENSDARG00000074275 2981 1.721 - 0.741 - - - - - 0.980 - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
34. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 1.721 - - - - 0.727 0.994 - - - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
35. rai14 ENSDARG00000039974, ENSDARG00000111103 916 1.714 - 0.745 - - - - - 0.969 - retinoic acid induced 14 [Source:ZFIN;Acc:ZDB-GENE-040718-235]
36. farsa ENSDARG00000098825 2813 1.71 - 0.716 - - - 0.994 - - - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
37. evla ENSDARG00000035650 854 1.71 - 0.711 - - - 0.999 - - - Enah/Vasp-like a [Source:ZFIN;Acc:ZDB-GENE-000607-65]
38. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 1.708 - - - 0.721 - 0.987 - - - stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
39. selt2 12741 1.702 0.716 - - - - 0.986 - - - selenoprotein T, 2
40. acin1a ENSDARG00000054290 14023 1.701 - - - - - 0.962 0.739 - - apoptotic chromatin condensation inducer 1a [Source:ZFIN;Acc:ZDB-GENE-030616-583]
41. CABZ01070258.1 ENSDARG00000105687 3643 1.699 - - - - - 0.987 - - 0.712
42. plekhh1 ENSDARG00000053835 2123 1.697 - 0.700 - - - 0.997 - - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
43. gys1 ENSDARG00000016875 2037 1.695 - 0.702 - - - 0.993 - - - glycogen synthase 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1243]
44. wu:fb17g07 wu:fb17g07 10567 1.691 0.863 0.828 - - - - - - -
45. si:ch211-156j16.1 ENSDARG00000092035 7441 1.69 0.763 - - - - 0.927 - - - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
46. MYOM1 MYOM1 3870 1.689 - 0.725 - - - 0.964 - - -
47. hcls1 ENSDARG00000012729 1547 1.687 - - - - 0.713 - - 0.974 - hematopoietic cell-specific Lyn substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7191]
48. sgcd ENSDARG00000098573 4980 1.685 0.704 - - - - 0.981 - - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
49. pebp1 ENSDARG00000042069 6651 1.67 0.855 0.815 - - - - - - - phosphatidylethanolamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2621]
50. fermt1 ENSDARG00000052652 2394 1.669 - - - - 0.714 - - 0.955 - fermitin family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3264]
51. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.667 0.803 0.864 - - - - - - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
52. cap2 ENSDARG00000104478 3266 1.664 0.892 0.772 - - - - - - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
53. tmsb ENSDARG00000054911 6411 1.657 0.938 0.719 - - - - - - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
54. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.656 0.787 - - - - - - 0.869 - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
55. rassf8b ENSDARG00000045485 1568 1.655 0.825 0.830 - - - - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 8b [Source:ZFIN;Acc:ZDB-GENE-040426-1338]
56. chrng ENSDARG00000086647 676 1.655 0.837 0.818 - - - - - - - cholinergic receptor, nicotinic, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-3805]
57. pfdn5 ENSDARG00000035043, ENSDARG00000109218, ENSDARG00000110370, ENSDARG00000113603 7566 1.647 - 0.723 - - - - - 0.924 - prefoldin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6858]
58. txlnbb ENSDARG00000076241 6396 1.646 0.828 0.818 - - - - - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
59. slc1a3a ENSDARG00000104431 9888 1.646 0.825 0.821 - - - - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
60. pbxip1a ENSDARG00000071015 4960 1.641 0.788 0.853 - - - - - - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
61. BX294434.1 ENSDARG00000061272 6493 1.637 0.802 0.835 - - - - - - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
62. prmt1 ENSDARG00000010246 11311 1.627 0.812 0.815 - - - - - - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
63. pygma ENSDARG00000055518 15972 1.612 0.792 0.820 - - - - - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
64. ENDOD1_5 ENDOD1_5 8723 1.61 0.854 - 0.756 - - - - - -
65. vcl vcl 6667 1.61 0.729 0.881 - - - - - - -
66. smarca5 ENSDARG00000052348 15433 1.609 - 0.809 - - - - 0.800 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
67. mrps14 ENSDARG00000068305 1648 1.607 0.774 0.833 - - - - - - - mitochondrial ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-060825-75]
68. actn3b ENSDARG00000001431 15747 1.605 0.762 0.843 - - - - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
69. tnc ENSDARG00000021948, ENSDARG00000113518 12162 1.605 - 0.834 - - - - - 0.771 - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
70. pa2g4b ENSDARG00000070657 7999 1.602 - 0.878 - - - - 0.724 - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
71. camk2d2 ENSDARG00000014273 2840 1.602 0.789 0.813 - - - - - - - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-277]
72. sptb ENSDARG00000030490 7128 1.601 0.770 0.831 - - - - - - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
73. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 1.599 0.762 0.837 - - - - - - - si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
74. gpx7 ENSDARG00000091511 3045 1.597 - 0.754 - - - - - 0.843 - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
75. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 1.593 0.785 - - - 0.808 - - - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
76. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 1.593 0.747 0.846 - - - - - - - calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
77. eif3ea ENSDARG00000090697 14670 1.59 - - - - 0.796 - 0.794 - - eukaryotic translation initiation factor 3, subunit E, a [Source:ZFIN;Acc:ZDB-GENE-030131-3827]
78. eif2s3 ENSDARG00000008292 17051 1.588 0.849 0.739 - - - - - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
79. COL22A1 COL22A1 4473 1.583 0.718 0.865 - - - - - - -
80. snrpe ENSDARG00000033175 7462 1.578 0.772 0.806 - - - - - - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
81. cdkn2aipnl ENSDARG00000053395 5107 1.578 - 0.843 - 0.735 - - - - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
82. smyd2b ENSDARG00000005629 8181 1.578 0.737 0.841 - - - - - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
83. cd99l2 ENSDARG00000056722 5036 1.576 0.763 0.813 - - - - - - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
84. smyd1b ENSDARG00000091253 4964 1.576 0.798 0.778 - - - - - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
85. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.574 0.795 0.779 - - - - - - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
86. PTP4A3 ENSDARG00000039997 3814 1.573 0.775 0.798 - - - - - - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
87. CR388002.1 CR388002.1 1998 1.573 0.777 0.796 - - - - - - -
88. ntmt1 ENSDARG00000022399 5779 1.566 0.724 0.842 - - - - - - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
89. NRAP ENSDARG00000009341 3565 1.563 0.750 0.813 - - - - - - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
90. slc6a9 ENSDARG00000018534 4089 1.563 0.857 - - - - 0.706 - - - solute carrier family 6 (neurotransmitter transporter, glycine), member 9 [Source:ZFIN;Acc:ZDB-GENE-050105-3]
91. pgam2 ENSDARG00000057571 23387 1.563 0.747 - - - - 0.816 - - - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
92. mybbp1a ENSDARG00000078214 2458 1.561 - 0.847 - - 0.714 - - - - MYB binding protein (P160) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9864]
93. fitm1 ENSDARG00000056464 1759 1.556 0.764 0.792 - - - - - - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
94. kpna3 ENSDARG00000052641 5347 1.555 - 0.773 - - - - 0.782 - - karyopherin alpha 3 (importin alpha 4) [Source:ZFIN;Acc:ZDB-GENE-030616-541]
95. ppp1r14c ENSDARG00000077341 1587 1.555 0.718 0.837 - - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
96. DUSP27 ENSDARG00000099889 1197 1.553 0.731 0.822 - - - - - - - dual specificity phosphatase 27 [Source:ZFIN;Acc:ZDB-GENE-140513-1]
97. CCRN4L CCRN4L 518 1.551 0.783 0.768 - - - - - - -
98. actn2 actn2 1054 1.544 0.733 0.811 - - - - - - -
99. dnmt3ab ENSDARG00000015566 1206 1.544 0.757 0.787 - - - - - - - DNA (cytosine-5-)-methyltransferase 3 alpha b [Source:ZFIN;Acc:ZDB-GENE-050314-3]
100. cacng1 cacng1 3118 1.544 0.757 0.787 - - - - - - -

There are 1511 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA