Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for her8a

Gene Name Gene ID Reads Annotation
her8a ENSDARG00000016363 996 hairy-related 8a [Source:ZFIN;Acc:ZDB-GENE-030131-2376]










Genes with expression patterns similar to her8a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. her8a ENSDARG00000016363 996 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 hairy-related 8a [Source:ZFIN;Acc:ZDB-GENE-030131-2376]
2. nrn1a ENSDARG00000071860 1311 3.19 0.726 - - - 0.888 0.867 0.709 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
3. stmn4 ENSDARG00000030106 518 2.967 0.703 - - 0.737 - 0.769 - 0.758 - stathmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2732]
4. atl1 ENSDARG00000060481 251 2.953 0.743 - - - - 0.727 0.724 0.759 - atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]
5. glrbb ENSDARG00000052769, ENSDARG00000113828 467 2.919 0.711 - - 0.722 - 0.716 0.770 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
6. si:ch211-278j3.3 ENSDARG00000020284 478 2.621 - - - - 0.882 0.913 0.826 - - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
7. slc1a2b ENSDARG00000102453 3136 2.597 0.909 - - - - 0.805 0.883 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
8. ndrg4 ENSDARG00000103937 1234 2.589 0.834 - - - - 0.918 0.837 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
9. cdk5r1b ENSDARG00000045087 2075 2.574 0.887 - - - - 0.867 0.820 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
10. stx1b ENSDARG00000000503 2724 2.539 0.861 - - - - 0.850 0.828 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
11. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 2.537 0.763 - - - 0.902 0.872 - - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
12. si:ch211-11c15.3 si:ch211-11c15.3 1279 2.531 0.848 - - - - 0.834 0.849 - -
13. scn8aa ENSDARG00000005775 792 2.523 0.787 - - - - 0.880 0.856 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
14. cadm3 ENSDARG00000057013 1545 2.511 0.838 - - - - 0.864 0.809 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
15. rab6ba ENSDARG00000034522 495 2.51 0.797 - - - - 0.919 0.794 - - RAB6B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-050809-136]
16. stmn2a ENSDARG00000033234 2272 2.486 0.863 - - - - 0.820 0.803 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
17. wasf3 wasf3 3287 2.476 0.722 - - - 0.889 0.865 - - -
18. fhdc1 ENSDARG00000074812 934 2.455 0.880 - - - 0.845 - 0.730 - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
19. si:dkey-28b4.8 ENSDARG00000002840 1277 2.448 - - - - 0.823 0.758 0.867 - - si:dkey-28b4.8 [Source:ZFIN;Acc:ZDB-GENE-090501-2]
20. nrxn2a ENSDARG00000061454 291 2.446 0.843 - - - - 0.769 0.834 - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
21. TUSC5 TUSC5 1436 2.446 0.863 - - - - 0.736 0.847 - -
22. SV2B SV2B 208 2.444 0.936 - - - - 0.727 0.781 - -
23. st8sia2 ENSDARG00000018788 2183 2.437 - - 0.783 - 0.895 0.759 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
24. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.435 - - - - 0.744 0.873 0.818 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
25. gap43 ENSDARG00000099744 4114 2.434 0.772 - - - - 0.895 0.767 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
26. sh3gl2 sh3gl2 1305 2.432 0.831 - - - - 0.795 0.806 - -
27. spock2 ENSDARG00000075393 791 2.429 0.847 - - - - 0.849 0.733 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
28. slc18a3a ENSDARG00000006356 1285 2.425 - - - - 0.783 0.861 0.781 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
29. ZFHX3 ENSDARG00000103057 7759 2.421 0.730 - - - - 0.904 0.787 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
30. stmn2b ENSDARG00000070537 1586 2.419 0.738 - - - - 0.874 0.807 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
31. MAP1A MAP1A 847 2.419 0.756 - - - - 0.824 0.839 - -
32. CR524483.1 ENSDARG00000109248 86 2.417 0.840 - - - - 0.744 0.833 - - si:dkey-151p21.7 [Source:NCBI gene;Acc:562936]
33. dpysl3 ENSDARG00000002587 4381 2.412 0.776 - - - - 0.850 0.786 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
34. amph ENSDARG00000007663 599 2.403 0.779 - - - - 0.775 0.849 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
35. tuba1c ENSDARG00000055216 8384 2.403 0.735 - - - - 0.865 0.803 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
36. add2 ENSDARG00000074581 1402 2.401 0.772 - - - - 0.854 0.775 - - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
37. dnm1b ENSDARG00000009281 219 2.401 0.869 - - 0.786 - - 0.746 - - dynamin 1b [Source:ZFIN;Acc:ZDB-GENE-100920-3]
38. snap25a ENSDARG00000020609 4537 2.398 0.828 - - - - 0.793 0.777 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
39. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 2.397 0.736 - - - - 0.860 0.801 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
40. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.394 0.759 - - - - 0.817 0.818 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
41. snap25b ENSDARG00000058117 469 2.394 0.761 - - - - 0.808 0.825 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
42. elavl4 ENSDARG00000045639 998 2.381 0.797 - - - - 0.796 0.788 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
43. snap91 ENSDARG00000098809 844 2.379 0.818 - - - - 0.774 0.787 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
44. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.364 0.757 - - - - 0.764 0.843 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
45. tuba2 ENSDARG00000045014 1490 2.364 0.754 - - - - 0.819 0.791 - - tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
46. her2 ENSDARG00000038205 3219 2.363 - - - - 0.842 0.740 0.781 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
47. STMN3 ENSDARG00000038465 1009 2.363 0.757 - - - - 0.789 0.817 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
48. asic1b ENSDARG00000101866 61 2.361 0.840 - 0.774 0.747 - - - - - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
49. gsx1 ENSDARG00000035735 1243 2.36 0.742 - - - - 0.810 0.808 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
50. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.357 0.788 - - - - 0.734 0.835 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
51. hmp19 2554 2.352 - - 0.814 - - 0.834 0.704 - - HMP19 protein
52. mycla ENSDARG00000006003 1866 2.352 - - 0.708 - 0.878 - - 0.766 - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
53. prrt1 ENSDARG00000062208 368 2.351 0.746 - - - - 0.872 0.733 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
54. sypb ENSDARG00000002230 262 2.349 0.747 - - - - 0.759 0.843 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
55. rusc1 ENSDARG00000078125 617 2.347 0.759 - - - - 0.818 0.770 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
56. CPLX1 CPLX1 386 2.346 - - - 0.741 - 0.752 - 0.853 -
57. Mar-04 Mar-04 21 2.344 0.848 - - - - 0.700 0.796 - -
58. AGO1 ENSDARG00000092644 4521 2.34 - - - - 0.756 0.808 0.776 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
59. TUBB8P7_1 TUBB8P7_1 2722 2.337 0.810 - - - - 0.814 0.713 - -
60. pax3a ENSDARG00000010192 626 2.332 - - - 0.760 - 0.823 0.749 - - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
61. slc1a3a ENSDARG00000104431 9888 2.331 0.754 - - - - 0.848 0.729 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
62. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.329 0.738 - - - - 0.778 0.813 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
63. mb21d2a mb21d2a 421 2.326 0.769 - - - - 0.710 0.847 - -
64. rab3ab ENSDARG00000043835 1267 2.325 0.702 - - - - 0.833 0.790 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
65. zic2a ENSDARG00000015554 2860 2.319 0.828 - - - - 0.733 0.758 - - zic family member 2 (odd-paired homolog, Drosophila), a [Source:ZFIN;Acc:ZDB-GENE-000710-4]
66. pacsin1b ENSDARG00000042128 1051 2.319 - - 0.729 - - 0.798 0.792 - - protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]
67. lhx5 ENSDARG00000057936 785 2.317 0.818 - - - - 0.743 0.756 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
68. ntng2a ENSDARG00000077367 43 2.314 0.775 - - - - 0.743 0.796 - - netrin g2a [Source:ZFIN;Acc:ZDB-GENE-081105-186]
69. npffr1l2 ENSDARG00000062631 127 2.314 - - 0.732 - - 0.816 0.766 - - neuropeptide FF receptor 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-060526-110]
70. ppp3ca ENSDARG00000004988 615 2.312 0.728 - - - - 0.785 0.799 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
71. eno2 ENSDARG00000014287 2162 2.311 0.857 - - - - 0.742 0.712 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
72. tlx2 ENSDARG00000011273 870 2.311 0.805 - - - - 0.800 0.706 - - T cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020208-1]
73. pnoca ENSDARG00000025024 467 2.309 0.702 - - - - 0.764 0.843 - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
74. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.297 0.784 - - - - 0.753 0.760 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
75. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 2.292 0.780 - - - - 0.796 0.716 - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
76. mir124-6 64 2.291 0.718 - - - - 0.777 0.796 - - microRNA 124-6
77. stmn4l ENSDARG00000043932 654 2.285 0.726 - - - - 0.707 0.852 - - stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
78. epha4b ENSDARG00000011600 3110 2.282 0.726 - - - - 0.803 0.753 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
79. adam11 ENSDARG00000079204 298 2.281 0.734 - - - - 0.739 0.808 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
80. evx2 ENSDARG00000059255 317 2.277 0.718 - - - - 0.737 0.822 - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
81. necap1 ENSDARG00000020798 612 2.276 0.823 - - - - 0.735 0.718 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
82. mllt11 ENSDARG00000071026 2518 2.276 0.744 - - - - 0.827 0.705 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
83. fez1 ENSDARG00000023174 701 2.276 0.713 - - - - 0.708 0.855 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
84. map7d2a ENSDARG00000068480 513 2.274 0.762 - - - - 0.742 0.770 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
85. scg2b ENSDARG00000038574 345 2.273 0.743 - - - - 0.821 0.709 - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
86. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 2.265 0.722 - - - - 0.811 0.732 - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
87. slc32a1 ENSDARG00000059775 1092 2.263 0.730 - - - - 0.709 0.824 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
88. cers6 ENSDARG00000053583 247 2.251 0.774 - - - - 0.748 0.729 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
89. lrrtm1 ENSDARG00000052713 1041 2.247 0.718 - - - - 0.743 0.786 - - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
90. nefmb ENSDARG00000043697 2052 2.247 0.743 - - - - 0.784 0.720 - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
91. pcsk1nl ENSDARG00000076170 1232 2.242 - - - - - 0.742 0.748 0.752 - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
92. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 2.239 - - - - 0.760 0.765 0.714 - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
93. MAP6 MAP6 643 2.238 0.739 - - - - 0.788 0.711 - -
94. SNAP91 ENSDARG00000098809 556 2.225 0.700 - - - - 0.737 0.788 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
95. pou4f1 ENSDARG00000005559 821 2.223 0.730 - - - - 0.722 0.771 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
96. plp1a ENSDARG00000103732 3544 2.217 0.702 - - - - 0.785 0.730 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
97. pou3f3a ENSDARG00000042032 2835 2.213 - - - - - 0.772 0.705 0.736 - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
98. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 1.785 - - - - 0.904 - 0.881 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
99. JPH3 ENSDARG00000102204 283 1.78 - - - - 0.856 0.924 - - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
100. syt4 ENSDARG00000036505 421 1.77 0.921 - - - - - 0.849 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]

There are 2479 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA