Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for her7

Gene Name Gene ID Reads Annotation
her7 ENSDARG00000017917 53 hairy and enhancer of split related-7 [Source:ZFIN;Acc:ZDB-GENE-000427-6]










Genes with expression patterns similar to her7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. her7 ENSDARG00000017917 53 4 - - 1.000 - 1.000 - 1.000 1.000 - hairy and enhancer of split related-7 [Source:ZFIN;Acc:ZDB-GENE-000427-6]
2. il1b ENSDARG00000098700 27 1.745 - - - - 0.994 - 0.751 - - interleukin 1, beta [Source:ZFIN;Acc:ZDB-GENE-040702-2]
3. zgc:174573 ENSDARG00000079035 89 1.722 - - 0.797 - 0.925 - - - - zgc:174573 [Source:ZFIN;Acc:ZDB-GENE-030131-2123]
4. cables2b ENSDARG00000017154 131 1.618 - - 0.824 - 0.794 - - - - Cdk5 and Abl enzyme substrate 2b [Source:ZFIN;Acc:ZDB-GENE-090313-249]
5. CU929133.1 CU929133.1 94 1.603 - - 0.791 - 0.812 - - - -
6. DPEP3 DPEP3 53 1.514 - - 0.736 - 0.778 - - - -
7. elnb ENSDARG00000069017 744 1 - - - - - - 1.000 - - elastin b [Source:ZFIN;Acc:ZDB-GENE-061212-2]
8. si:dkey-27n6.9 51 1 - - 1.000 - - - - - - si:dkey-27n6.9, transcript variant X4
9. zgc:174224_2 ENSDARG00000093875 22 1 - - - - - - 1.000 - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
10. U6_14 U6_14 3 0.997 - - 0.997 - - - - - -
11. zgc:112966 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 7 0.997 - - 0.997 - - - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
12. msgn1 ENSDARG00000070546 188 0.997 - - - - 0.997 - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
13. TWF1 TWF1 3 0.997 - - 0.997 - - - - - -
14. CABZ01088365.1 CABZ01088365.1 66 0.997 - - 0.997 - - - - - -
15. snapc1a ENSDARG00000029569 25 0.997 - - 0.997 - - - - - - small nuclear RNA activating complex, polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1031]
16. SYDE1 ENSDARG00000077440 4 0.997 - - 0.997 - - - - - - synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]
17. si:dkey-234l24.8 ENSDARG00000093588 7 0.997 - - 0.997 - - - - - - si:dkey-234l24.8 [Source:ZFIN;Acc:ZDB-GENE-050420-23]
18. si:ch211-14k19.8 ENSDARG00000088975 7 0.997 - - 0.997 - - - - - - si:ch211-14k19.8 [Source:ZFIN;Acc:ZDB-GENE-051214-4]
19. APOBEC2 APOBEC2 9 0.997 - - 0.997 - - - - - -
20. si:dkey-282h22.5 ENSDARG00000092458 7 0.997 - - 0.997 - - - - - - si:dkey-282h22.5 [Source:ZFIN;Acc:ZDB-GENE-091204-220]
21. l3mbtl1a ENSDARG00000014828 119 0.997 - - 0.997 - - - - - - l(3)mbt-like 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090312-120]
22. ccdc24 ENSDARG00000038793 7 0.997 - - 0.997 - - - - - - coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
23. si:dkeyp-27b10.1 si:dkeyp-27b10.1 9 0.997 - - 0.997 - - - - - -
24. casp6 ENSDARG00000093405, ENSDARG00000115863 11 0.997 - - 0.997 - - - - - - caspase 6, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-4]
25. CABZ01041860.1 CABZ01041860.1 4 0.994 - - - - 0.994 - - - -
26. CRFA31.2 CRFA31.2 12 0.994 - - - - 0.994 - - - -
27. tecpr1a ENSDARG00000062515 7 0.994 - - - - 0.994 - - - - tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
28. si:ch211-250c4.5 ENSDARG00000075943 10 0.994 - - - - 0.994 - - - - si:ch211-250c4.5 [Source:ZFIN;Acc:ZDB-GENE-081107-33]
29. fto ENSDARG00000044216 33 0.994 - - - - 0.994 - - - - fat mass and obesity associated [Source:ZFIN;Acc:ZDB-GENE-061108-1]
30. CR391924.1 CR391924.1 5 0.994 - - - - 0.994 - - - -
31. ZC2HC1C ENSDARG00000070526 14 0.994 - - - - 0.994 - - - - zinc finger, C2HC-type containing 1C [Source:ZFIN;Acc:ZDB-GENE-111020-1]
32. dnajb1b ENSDARG00000041394 25 0.994 - - - - 0.994 - - - - DnaJ (Hsp40) homolog, subfamily B, member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5455]
33. si:ch211-14g4.4 si:ch211-14g4.4 6 0.994 - - - - 0.994 - - - -
34. si:ch211-195i24.1 si:ch211-195i24.1 10 0.993 - - - - 0.993 - - - -
35. zbtb16a ENSDARG00000007184 6 0.993 - - - - 0.993 - - - - zinc finger and BTB domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-030131-1989]
36. CU467982.1 CU467982.1 12 0.993 - - 0.993 - - - - - -
37. si:ch211-225b11.4 ENSDARG00000093563 42 0.992 - - 0.992 - - - - - - si:ch211-225b11.4 [Source:ZFIN;Acc:ZDB-GENE-060526-114]
38. tmem168b ENSDARG00000062168 17 0.992 - - - - 0.992 - - - - transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
39. or115-6 ENSDARG00000044337 5 0.992 - - - - 0.992 - - - - odorant receptor, family F, subfamily 115, member 6 [Source:ZFIN;Acc:ZDB-GENE-070806-8]
40. cobl ENSDARG00000091006 4 0.991 - - 0.991 - - - - - - cordon-bleu WH2 repeat protein [Source:ZFIN;Acc:ZDB-GENE-091020-11]
41. fbxw10 ENSDARG00000086484 11 0.991 - - - - 0.991 - - - - F-box and WD repeat domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-101021-1]
42. NUMA1_3 NUMA1_3 5 0.991 - - - - 0.991 - - - -
43. zgc:152968 ENSDARG00000037002 6 0.991 - - - - 0.991 - - - - zgc:152968 [Source:ZFIN;Acc:ZDB-GENE-061013-448]
44. CR392354.1 CR392354.1 20 0.991 - - - - 0.991 - - - -
45. CR932360.4 CR932360.4 3 0.99 - - 0.990 - - - - - -
46. tnfsf10l3 ENSDARG00000032746 37 0.989 - - - - 0.989 - - - - tumor necrosis factor (ligand) superfamily, member 10 like 3 [Source:ZFIN;Acc:ZDB-GENE-070606-1]
47. osgin2 ENSDARG00000040302 45 0.989 - - - - 0.989 - - - - oxidative stress induced growth inhibitor family member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-57]
48. si:dkey-202i12.5 si:dkey-202i12.5 20 0.988 - - - - 0.988 - - - -
49. flh flh 47 0.988 - - - - 0.988 - - - -
50. zgc:165481 ENSDARG00000060092 95 0.987 - - - - 0.987 - - - - zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
51. rictora ENSDARG00000100867 20 0.983 - - - - 0.983 - - - - RPTOR independent companion of MTOR, complex 2 a [Source:ZFIN;Acc:ZDB-GENE-060526-49]
52. CU183952.1 CU183952.1 32 0.983 - - - - 0.983 - - - -
53. zgc:113030 ENSDARG00000069869 53 0.982 - - 0.982 - - - - - - zgc:113030 [Source:ZFIN;Acc:ZDB-GENE-050522-528]
54. robo2 ENSDARG00000014891, ENSDARG00000078366 23 0.982 - - - - 0.982 - - - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
55. LYPLAL1 ENSDARG00000088764 87 0.981 - - - - 0.981 - - - - lysophospholipase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-32]
56. map4k2l_1 map4k2l_1 77 0.98 - - - - 0.980 - - - -
57. drc1 ENSDARG00000042182 39 0.979 - - - - 0.979 - - - - dynein regulatory complex subunit 1 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-041001-218]
58. lrrc34 ENSDARG00000062235 23 0.979 - - - - 0.979 - - - - leucine rich repeat containing 34 [Source:ZFIN;Acc:ZDB-GENE-091118-73]
59. si:ch73-196i15.3 ENSDARG00000094281 1005 0.973 - - - - 0.973 - - - - si:ch73-196i15.3 [Source:ZFIN;Acc:ZDB-GENE-091116-4]
60. nkx1.2la ENSDARG00000006350 76 0.972 - - - - 0.972 - - - - NK1 transcription factor related 2-like,a [Source:ZFIN;Acc:ZDB-GENE-040615-1]
61. zgc:154055 ENSDARG00000103924 452 0.969 - - 0.969 - - - - - - zgc:154055 [Source:ZFIN;Acc:ZDB-GENE-060929-612]
62. dbpb ENSDARG00000057652, ENSDARG00000116703 71 0.968 - - 0.968 - - - - - - D site albumin promoter binding protein b [Source:ZFIN;Acc:ZDB-GENE-100922-6]
63. WSCD1 ENSDARG00000098113 35 0.963 - - 0.963 - - - - - - WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
64. NAV1 NAV1 23 0.962 - - - - 0.962 - - - -
65. RFESD_2 RFESD_2 29 0.961 - - 0.961 - - - - - -
66. pih1d3 ENSDARG00000038612, ENSDARG00000116391, ENSDARG00000116607 57 0.959 - - - - 0.959 - - - - PIH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040722-2]
67. GPR158 GPR158 64 0.958 - - - - 0.958 - - - -
68. ttc39a ENSDARG00000074126 7 0.957 - - 0.957 - - - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
69. si:dkey-200l5.4 ENSDARG00000095294 13 0.954 - - - - 0.954 - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
70. si:dkeyp-35e5.9 ENSDARG00000103527 24 0.951 - - - - 0.951 - - - - si:dkeyp-35e5.9 [Source:ZFIN;Acc:ZDB-GENE-110913-107]
71. si:ch211-274p24.4 ENSDARG00000087088 36 0.951 - - - - 0.951 - - - - si:ch211-274p24.4 [Source:ZFIN;Acc:ZDB-GENE-091204-337]
72. si:ch211-209j10.5 si:ch211-209j10.5 13 0.95 - - 0.950 - - - - - -
73. C18H19orf47 C18H19orf47 44 0.947 - - - - 0.947 - - - -
74. eve1 ENSDARG00000056012 144 0.947 - - - - 0.947 - - - - even-skipped-like1 [Source:ZFIN;Acc:ZDB-GENE-980526-69]
75. WDR49 WDR49 6 0.943 - - - - - - 0.943 - -
76. hnrnpc ENSDARG00000053810, ENSDARG00000113662 66 0.943 - - - - - - 0.943 - - heterogeneous nuclear ribonucleoprotein C [Source:ZFIN;Acc:ZDB-GENE-040426-2043]
77. C21H11orf82 C21H11orf82 50 0.943 - - - - - - 0.943 - -
78. TULP1 TULP1 50 0.942 - - - - 0.942 - - - -
79. rsph4a ENSDARG00000067606 132 0.94 - - - - 0.940 - - - - radial spoke head component 4A [Source:ZFIN;Acc:ZDB-GENE-030131-7437]
80. fn1 fn1 2538 0.938 - - - - 0.938 - - - -
81. mycbpap ENSDARG00000069194 32 0.938 - - - - 0.938 - - - - mycbp associated protein [Source:ZFIN;Acc:ZDB-GENE-080923-1]
82. fam136a ENSDARG00000098401 50 0.933 - - - - - - 0.933 - - family with sequence similarity 136, member A [Source:ZFIN;Acc:ZDB-GENE-040426-2729]
83. nr6a1a ENSDARG00000096224, ENSDARG00000101508 24 0.932 - - - - 0.932 - - - - nuclear receptor subfamily 6, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-991207-19]
84. bbox1 ENSDARG00000036135, ENSDARG00000113482 74 0.93 - - - - 0.930 - - - - butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1 [Source:ZFIN;Acc:ZDB-GENE-050417-218]
85. wu:fe38f03 wu:fe38f03 22 0.93 - - 0.930 - - - - - -
86. si:ch211-152p11.8 46 0.927 - - 0.927 - - - - - - si:ch211-152p11.8, transcript variant X2
87. BX649554.3_1 BX649554.3_1 1071 0.926 - - - - 0.926 - - - -
88. suv39h1a ENSDARG00000026799 18 0.924 - - 0.924 - - - - - - suppressor of variegation 3-9 homolog 1a [Source:ZFIN;Acc:ZDB-GENE-040801-111]
89. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 0.924 - - - - 0.924 - - - - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
90. adm2a ENSDARG00000045708, ENSDARG00000111740 246 0.922 - - - - 0.922 - - - - adrenomedullin 2a [Source:ZFIN;Acc:ZDB-GENE-041210-100]
91. her1 ENSDARG00000014722 29 0.92 - - - - 0.920 - - - - hairy-related 1 [Source:ZFIN;Acc:ZDB-GENE-980526-125]
92. ccdc113 ENSDARG00000006981 67 0.919 - - - - 0.919 - - - - coiled-coil domain containing 113 [Source:ZFIN;Acc:ZDB-GENE-041010-163]
93. TMEM216 ENSDARG00000091576 357 0.919 - - - - 0.919 - - - - transmembrane protein 216 [Source:HGNC Symbol;Acc:HGNC:25018]
94. tnni2b.2 ENSDARG00000029995 935 0.918 - - 0.918 - - - - - - troponin I type 2b (skeletal, fast), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040801-9]
95. CCDC87 ENSDARG00000045683 27 0.916 - - - - 0.916 - - - - coiled-coil domain containing 87 [Source:ZFIN;Acc:ZDB-GENE-041210-118]
96. SUSD1_1 SUSD1_1 83 0.916 - - 0.916 - - - - - -
97. si:ch73-155e10.1 si:ch73-155e10.1 13 0.915 - - - - 0.915 - - - -
98. si:ch211-81a5.8 ENSDARG00000070972 59 0.914 - - 0.914 - - - - - - si:ch211-81a5.8 [Source:ZFIN;Acc:ZDB-GENE-060503-138]
99. si:dkey-1p9.5 si:dkey-1p9.5 55 0.911 - - - - 0.911 - - - -
100. FAM161A ENSDARG00000089742 41 0.909 - - - - 0.909 - - - - family with sequence similarity 161, member A [Source:ZFIN;Acc:ZDB-GENE-110310-1]

There are 322 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA