Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for her5

Gene Name Gene ID Reads Annotation
her5 ENSDARG00000008796 7 hairy-related 5 [Source:ZFIN;Acc:ZDB-GENE-990415-90]










Genes with expression patterns similar to her5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. her5 ENSDARG00000008796 7 4 - - 1.000 1.000 1.000 - - 1.000 - hairy-related 5 [Source:ZFIN;Acc:ZDB-GENE-990415-90]
2. pax5 ENSDARG00000037383 319 2.298 - - 0.803 0.744 0.751 - - - - paired box 5 [Source:ZFIN;Acc:ZDB-GENE-001030-2]
3. zgc:173619_1 2 1.76 - - - 0.760 - - - 1.000 - zgc:173619
4. si:ch211-208f21.2 ENSDARG00000094177 61 1.658 - - - 0.760 - - - 0.898 - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
5. plscr3a ENSDARG00000093078 7 1.605 - - 0.772 - - - - 0.833 - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
6. SH2D1B SH2D1B 60 1.567 - - - - 0.728 - - 0.839 -
7. pyya ENSDARG00000053449 134 1.546 - - - 0.811 0.735 - - - - peptide YYa [Source:ZFIN;Acc:ZDB-GENE-980526-71]
8. ENSDARG00000029117 ENSDARG00000029117 80 1.542 - - 0.777 - 0.765 - - - -
9. opn1lw2 ENSDARG00000044861, ENSDARG00000115709 277 1.495 - - - 0.760 0.735 - - - - opsin 1 (cone pigments), long-wave-sensitive, 2 [Source:ZFIN;Acc:ZDB-GENE-040718-141]
10. foxl2 61 1.447 - - 0.705 - 0.742 - - - - forkhead box L2, transcript variant X1
11. U11 U11 11 1 - - - - - - - 1.000 -
12. umodl1 ENSDARG00000068923 2 1 - - - - - - - 1.000 - uromodulin-like 1 [Source:ZFIN;Acc:ZDB-GENE-091204-140]
13. KIFC2 KIFC2 5 1 - - - - - - - 1.000 -
14. glulc ENSDARG00000013227 6 1 - - - - - - - 1.000 - glutamate-ammonia ligase (glutamine synthase) c [Source:ZFIN;Acc:ZDB-GENE-060929-540]
15. si:dkey-247i3.5 ENSDARG00000096186 7 1 - - - - - - - 1.000 - si:dkey-247i3.5 [Source:ZFIN;Acc:ZDB-GENE-110914-32]
16. lrsam1 ENSDARG00000060683, ENSDARG00000110826, ENSDARG00000114858 4 1 - - - - - - - 1.000 - leucine rich repeat and sterile alpha motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-060526-97]
17. znf1112 ENSDARG00000095997 2 1 - - - - - - - 1.000 - zinc finger protein 1112 [Source:ZFIN;Acc:ZDB-GENE-110913-179]
18. si:dkey-29p23.2 ENSDARG00000113192 2 1 - - - - - - - 1.000 - si:dkey-29p23.2 [Source:ZFIN;Acc:ZDB-GENE-110914-51]
19. taar10c ENSDARG00000109396, ENSDARG00000110168, ENSDARG00000114249, ENSDARG00000117173 2 1 - - - - - - - 1.000 - trace amine-associated receptor 10c [Source:ZFIN;Acc:ZDB-GENE-041014-57]
20. HYKK_1 HYKK_1 4 1 - - - - - - - 1.000 -
21. cep41 ENSDARG00000038500, ENSDARG00000117114 4 1 - - - - - - - 1.000 - centrosomal protein 41 [Source:ZFIN;Acc:ZDB-GENE-040704-35]
22. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - - - - - - 1.000 - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
23. snoU6-53 snoU6-53 2 1 - - - - - - - 1.000 -
24. CU302436.1_1 ENSDARG00000114500 18 1 - - - - - - - 1.000 - si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883]
25. si:dkey-182i3.10 ENSDARG00000096614 2 1 - - - - - - - 1.000 - si:dkey-182i3.10 [Source:ZFIN;Acc:ZDB-GENE-121214-231]
26. CDKN2B CDKN2B 5 1 - - - - - - - 1.000 -
27. sv2ba ENSDARG00000057427 33 0.982 - - - 0.982 - - - - - synaptic vesicle glycoprotein 2Ba [Source:ZFIN;Acc:ZDB-GENE-070209-134]
28. ino80da ENSDARG00000104727 8 0.982 - - - 0.982 - - - - - INO80 complex subunit Da [Source:ZFIN;Acc:ZDB-GENE-091204-416]
29. GPR26 ENSDARG00000074389, ENSDARG00000116243 21 0.977 - - - - - - - 0.977 - G protein-coupled receptor 26 [Source:ZFIN;Acc:ZDB-GENE-131121-131]
30. RAB35 RAB35 4 0.976 - - 0.976 - - - - - -
31. SNORA63_1 SNORA63_1 7 0.965 - - - - - - - 0.965 -
32. rad21l1 ENSDARG00000022493 4 0.963 - - - - - - - 0.963 - RAD21 cohesin complex component like 1 [Source:ZFIN;Acc:ZDB-GENE-061103-505]
33. CR792453.3 ENSDARG00000110328 5 0.963 - - - - - - - 0.963 - uncharacterized LOC110438862 [Source:NCBI gene;Acc:110438862]
34. HTRA2_10 HTRA2_10 2 0.961 - - - - - - - 0.961 -
35. PCBP3 ENSDARG00000054378 17 0.958 - - - - - - - 0.958 - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
36. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 0.955 - - - - - - - 0.955 - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
37. kcnt1 ENSDARG00000079484 45 0.954 - - - - - - - 0.954 - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
38. nitr3a ENSDARG00000110676 13 0.952 - - - - - - - 0.952 - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
39. si:dkey-122c11.4 si:dkey-122c11.4 13 0.938 - - - - - - - 0.938 -
40. GPRIN1 10 0.934 - - - - - - - 0.934 - G protein regulated inducer of neurite outgrowth 1
41. ANKRD34C 13 0.932 - - - - - - - 0.932 - ankyrin repeat domain 34C
42. hsf5 ENSDARG00000104686 9 0.932 - - - - - - - 0.932 - heat shock transcription factor family member 5 [Source:ZFIN;Acc:ZDB-GENE-070410-42]
43. klhl5 ENSDARG00000062122, ENSDARG00000114563, ENSDARG00000115909 27 0.932 - - 0.932 - - - - - - kelch-like family member 5 [Source:ZFIN;Acc:ZDB-GENE-080424-7]
44. CACNA2D1 ENSDARG00000073752 6 0.932 - - - - - - - 0.932 - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
45. camk1db ENSDARG00000017446 47 0.927 - - - - - - - 0.927 - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
46. si:dkey-80c24.5 ENSDARG00000092501 6 0.926 - - - - - - - 0.926 - si:dkey-80c24.5 [Source:ZFIN;Acc:ZDB-GENE-061207-73]
47. si:ch211-209f23.3 ENSDARG00000095607 15 0.922 - - - - - - - 0.922 - si:ch211-209f23.3 [Source:ZFIN;Acc:ZDB-GENE-100921-45]
48. efcab4bb efcab4bb 27 0.919 - - - - - - - 0.919 -
49. CAMK1 CAMK1 28 0.916 - - - - - - - 0.916 -
50. si:dkey-29p23.1 ENSDARG00000113896 1 0.916 - - 0.916 - - - - - - si:dkey-29p23.1 [Source:ZFIN;Acc:ZDB-GENE-081103-27]
51. si:ch211-89f22.1 si:ch211-89f22.1 11 0.913 - - - - - - - 0.913 -
52. zeb1a ENSDARG00000016788 48 0.908 - - - 0.908 - - - - - zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124]
53. ELFN2 ELFN2 7 0.907 - - - - - - - 0.907 -
54. zgc:66455 ENSDARG00000052375 3 0.905 - - - 0.905 - - - - - zgc:66455 [Source:ZFIN;Acc:ZDB-GENE-040426-1642]
55. mettl25 ENSDARG00000045754 36 0.899 - - - - - - - 0.899 - methyltransferase like 25 [Source:ZFIN;Acc:ZDB-GENE-041210-90]
56. si:dkey-26c10.5 ENSDARG00000088023 9 0.898 - - - 0.898 - - - - - si:dkey-26c10.5 [Source:ZFIN;Acc:ZDB-GENE-060607-13]
57. grin2ab ENSDARG00000070543 31 0.897 - - - - - - - 0.897 - glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b [Source:ZFIN;Acc:ZDB-GENE-070424-223]
58. si:dkey-253d23.8 ENSDARG00000094427 26 0.893 - - - - - - - 0.893 - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
59. zgc:174623 37 0.887 - - - - - - - 0.887 - zgc:174623, transcript variant X1
60. eng2a eng2a 186 0.886 - - - - - - - 0.886 -
61. ZNF70_5 ZNF70_5 25 0.881 - - - - - - - 0.881 -
62. dync1i2a ENSDARG00000078386 53 0.877 - - - - - - - 0.877 - dynein, cytoplasmic 1, intermediate chain 2a [Source:ZFIN;Acc:ZDB-GENE-060929-1086]
63. U12 U12 14 0.876 - - - - - - - 0.876 -
64. sult2st3 ENSDARG00000028367 79 0.876 - - - - - - - 0.876 - sulfotransferase family 2, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-061117-4]
65. mettl21d mettl21d 94 0.871 - - - - - - - 0.871 -
66. osbp2 ENSDARG00000053487 42 0.87 - - - - - - - 0.870 - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
67. nif3l1 ENSDARG00000045249 28 0.87 - - - - 0.870 - - - - NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80]
68. GMNC ENSDARG00000068719 28 0.868 - - - - - - - 0.868 - geminin coiled-coil domain containing [Source:ZFIN;Acc:ZDB-GENE-121211-1]
69. CABZ01084700.1 CABZ01084700.1 26 0.868 - - - - 0.868 - - - -
70. ARMC6 ENSDARG00000103770 39 0.866 - - - - - - - 0.866 - armadillo repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:25049]
71. zgc:101765 ENSDARG00000054934, ENSDARG00000110184 49 0.866 - - - - - - - 0.866 - zgc:101765 [Source:ZFIN;Acc:ZDB-GENE-041010-156]
72. zgc:158340 zgc:158340 21 0.864 - - - 0.864 - - - - -
73. cbx6a ENSDARG00000071051 379 0.862 - - - - - - - 0.862 - chromobox homolog 6a [Source:ZFIN;Acc:ZDB-GENE-040808-26]
74. si:dkeyp-8h9.1 si:dkeyp-8h9.1 1 0.862 - - 0.862 - - - - - -
75. atp8b2 ENSDARG00000099216 21 0.862 - - 0.862 - - - - - - ATPase phospholipid transporting 8B2 [Source:ZFIN;Acc:ZDB-GENE-030131-2474]
76. si:ch211-271g18.4 ENSDARG00000115564 197 0.858 - - - - 0.858 - - - - si:ch211-271g18.4 [Source:ZFIN;Acc:ZDB-GENE-110914-58]
77. fgf20b ENSDARG00000086070 13 0.854 - - - - 0.854 - - - - fibroblast growth factor 20b [Source:ZFIN;Acc:ZDB-GENE-060117-5]
78. irx1a ENSDARG00000101831 644 0.854 - - - - 0.854 - - - - iroquois homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040707-1]
79. CCDC15 ENSDARG00000067517 28 0.851 - - - - 0.851 - - - - coiled-coil domain containing 15 [Source:ZFIN;Acc:ZDB-GENE-120411-25]
80. LRRC73 ENSDARG00000063411 52 0.851 - - - - 0.851 - - - - leucine rich repeat containing 73 [Source:ZFIN;Acc:ZDB-GENE-111118-2]
81. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 0.851 - - - - 0.851 - - - - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
82. BX005294.4 BX005294.4 8 0.849 - - - - - - - 0.849 -
83. AL954676.2 AL954676.2 50 0.849 - - - - - - - 0.849 -
84. kif26bb ENSDARG00000024575 18 0.849 - - - - - - - 0.849 - kinesin family member 26Bb [Source:ZFIN;Acc:ZDB-GENE-041001-188]
85. CR339051.1 CR339051.1 9 0.849 - - - - - - - 0.849 -
86. ZNF70_6 ZNF70_6 15 0.848 - - - - - - - 0.848 -
87. CSMD1 CSMD1 15 0.847 - - - - - - - 0.847 -
88. fxyd6 ENSDARG00000100971 51 0.846 - - - - - - - 0.846 - FXYD domain containing ion transport regulator 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5919]
89. CU179703.1 CU179703.1 5 0.844 - - - - - - - 0.844 -
90. BX119910.5 BX119910.5 3 0.844 - - - - - - - 0.844 -
91. tmem199 ENSDARG00000069314, ENSDARG00000112510 36 0.843 - - - - - - - 0.843 - transmembrane protein 199 [Source:ZFIN;Acc:ZDB-GENE-050522-150]
92. si:ch211-202h22.7 ENSDARG00000073912 18 0.843 - - - - - - - 0.843 - si:ch211-202h22.7 [Source:ZFIN;Acc:ZDB-GENE-090313-77]
93. ripply3 ENSDARG00000036974 30 0.841 - - - - - - - 0.841 - ripply transcriptional repressor 3 [Source:ZFIN;Acc:ZDB-GENE-060113-3]
94. oxt ENSDARG00000042845 2 0.841 - - - - - - - 0.841 - oxytocin [Source:ZFIN;Acc:ZDB-GENE-030407-1]
95. si:dkey-26h11.1 ENSDARG00000096437 0 0.84 - - 0.840 - - - - - - si:dkey-26h11.1 [Source:ZFIN;Acc:ZDB-GENE-120709-74]
96. si:rp71-7l19.6 si:rp71-7l19.6 12 0.84 - - 0.840 - - - - - -
97. xcr1a xcr1a 3 0.84 - - 0.840 - - - - - -
98. CU694374.2 CU694374.2 5 0.84 - - 0.840 - - - - - -
99. ghrh ENSDARG00000069481, ENSDARG00000111551 9 0.84 - - 0.840 - - - - - - growth hormone releasing hormone [Source:ZFIN;Acc:ZDB-GENE-070426-1]
100. amh ENSDARG00000014357 15 0.84 - - 0.840 - - - - - - anti-Mullerian hormone [Source:ZFIN;Acc:ZDB-GENE-050706-192]

There are 330 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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