Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for her4.4

Gene Name Gene ID Reads Annotation
her4.4 ENSDARG00000009822 50 hairy-related 4, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-081031-104]










Genes with expression patterns similar to her4.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. her4.4 ENSDARG00000009822 50 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 hairy-related 4, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-081031-104]
2. CR848045.1 CR848045.1 459 2.318 0.766 - - - - 0.756 0.796 - -
3. CABZ01041604.1 ENSDARG00000059854 35 2.268 - - 0.812 - - 0.743 0.713 - - E3 ubiquitin-protein ligase RNF182-like [Source:NCBI gene;Acc:797048]
4. fabp7a ENSDARG00000007697 5211 2.218 - - 0.743 - - 0.740 0.735 - - fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
5. gdf11 ENSDARG00000044924 534 1.765 - - - - - 0.864 0.901 - - growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
6. spred3 ENSDARG00000040358 134 1.713 - - - - - 0.713 1.000 - - sprouty-related, EVH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061207-31]
7. camsap1a ENSDARG00000019208 137 1.707 0.783 - - - - - 0.924 - - calmodulin regulated spectrin-associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-060518-4]
8. cers6 ENSDARG00000053583 247 1.702 0.893 - - - - - 0.809 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
9. SAMD14 145 1.685 0.873 - - - - 0.812 - - - sterile alpha motif domain containing 14, transcript variant X3
10. olfm2a ENSDARG00000077847 230 1.637 - - - - - 0.702 0.935 - - olfactomedin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2882]
11. zic4 ENSDARG00000031307 1228 1.62 0.772 - - - - - 0.848 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
12. camta1a ENSDARG00000077428, ENSDARG00000116922 176 1.612 0.894 - - - - - 0.718 - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
13. AL935029.1 AL935029.1 514 1.584 - - - - - 0.825 0.759 - -
14. syngr3b ENSDARG00000025034 290 1.576 - - - - - 0.718 0.858 - - synaptogyrin 3b [Source:ZFIN;Acc:ZDB-GENE-070822-6]
15. ANK1_1 ANK1_1 507 1.575 0.742 - - - - 0.833 - - -
16. dpysl4 ENSDARG00000103490 534 1.572 0.848 - - - - - 0.724 - - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
17. dscamb ENSDARG00000028118 82 1.565 0.719 - - - - 0.846 - - - Down syndrome cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-031118-67]
18. gpr37l1a ENSDARG00000006079 422 1.561 - - - - - 0.774 0.787 - - G protein-coupled receptor 37 like 1a [Source:ZFIN;Acc:ZDB-GENE-110411-20]
19. mnx1 ENSDARG00000035984, ENSDARG00000109419 1014 1.545 - - - - - 0.783 0.762 - - motor neuron and pancreas homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040409-1]
20. zc3h12b ENSDARG00000062463, ENSDARG00000113648 402 1.542 0.709 - - - - - 0.833 - - zinc finger CCCH-type containing 12B [Source:ZFIN;Acc:ZDB-GENE-060526-290]
21. THEM6 ENSDARG00000103914 49 1.541 - - - - - 0.799 0.742 - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
22. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.536 0.776 - - - - - 0.760 - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
23. clstn1 ENSDARG00000031720 5286 1.532 - - - - - 0.705 0.827 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
24. vgf ENSDARG00000105529 247 1.529 0.752 - - - - - 0.777 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
25. Mar-09 Mar-09 126 1.527 - - - - - 0.821 0.706 - -
26. P2RY1 ENSDARG00000105281 45 1.524 0.772 - - - - - 0.752 - - purinergic receptor P2Y1 [Source:ZFIN;Acc:ZDB-GENE-121004-2]
27. zgc:165481 ENSDARG00000060092 95 1.522 0.814 - - - - 0.708 - - - zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
28. nmnat2 ENSDARG00000004580 370 1.52 0.753 - - - - - 0.767 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
29. snap91 ENSDARG00000098809 844 1.519 - - - - - 0.759 0.760 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
30. zgc:194665 ENSDARG00000004577 136 1.518 - - - - - 0.757 0.761 - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
31. FAXC FAXC 102 1.515 - - - - - 0.803 0.712 - -
32. WNK2 ENSDARG00000104989 429 1.515 - - - - - 0.809 0.706 - - WNK lysine deficient protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-160114-3]
33. fbxo41 ENSDARG00000078908 95 1.515 - - - - - 0.737 0.778 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
34. hoxa2b ENSDARG00000023031 706 1.513 - - - - - 0.784 0.729 - - homeobox A2b [Source:ZFIN;Acc:ZDB-GENE-990415-98]
35. RNF208 ENSDARG00000078056 60 1.512 - - 0.775 - - - 0.737 - - ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]
36. tmem35 ENSDARG00000052567 5685 1.512 - - - - - 0.706 0.806 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
37. sprb ENSDARG00000058553 1694 1.511 0.797 - - - - - 0.714 - - sepiapterin reductase b [Source:ZFIN;Acc:ZDB-GENE-070719-1]
38. CR847998.1 ENSDARG00000104784 518 1.511 0.762 - - - - - 0.749 - -
39. elavl3 ENSDARG00000014420 8644 1.506 - - - - - 0.732 0.774 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
40. her2 ENSDARG00000038205 3219 1.503 - - - - - 0.761 0.742 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
41. APBB3 ENSDARG00000053771 654 1.489 - - - 0.717 - - 0.772 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
42. scube2 ENSDARG00000037362 2833 1.487 - - - - - 0.726 0.761 - - signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
43. dnm1b ENSDARG00000009281 219 1.484 0.736 - - - - - 0.748 - - dynamin 1b [Source:ZFIN;Acc:ZDB-GENE-100920-3]
44. KCNA3 KCNA3 748 1.483 - - - - - 0.776 0.707 - -
45. CABZ01111990.1 CABZ01111990.1 4374 1.483 - - - - - 0.720 0.763 - -
46. nbeaa ENSDARG00000070080 862 1.479 - - - - - 0.728 0.751 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
47. C8H1orf106 C8H1orf106 2690 1.478 - - - - - 0.752 0.726 - -
48. myo16 ENSDARG00000078582 714 1.476 - - - - - 0.700 0.776 - - myosin XVI [Source:ZFIN;Acc:ZDB-GENE-070912-470]
49. ATP6AP1L ATP6AP1L 164 1.476 0.729 - - - - - 0.747 - -
50. si:dkeyp-27e10.3 ENSDARG00000063008 369 1.474 0.759 - - - - - 0.715 - - si:dkeyp-27e10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-96]
51. ptprn2 ENSDARG00000035970, ENSDARG00000114075 354 1.466 - - 0.747 - - 0.719 - - - protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3758]
52. cdk5r1b ENSDARG00000045087 2075 1.466 0.728 - - - - - 0.738 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
53. slc12a5b ENSDARG00000078187 329 1.46 0.744 - - - - - 0.716 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
54. gng3 ENSDARG00000009553 2530 1.459 0.704 - - - - - 0.755 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
55. dtnbb ENSDARG00000013020 280 1.458 0.743 - - - - - 0.715 - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
56. ZFHX3 ENSDARG00000103057 7759 1.452 0.731 - - - - - 0.721 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
57. dbx2 2971 1.45 - - - - - 0.740 0.710 - - developing brain homeobox 2
58. epha4b ENSDARG00000011600 3110 1.445 - - - - - 0.701 0.744 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
59. neflb ENSDARG00000012426 298 1.442 - - - - - 0.705 0.737 - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
60. SPOCK1 ENSDARG00000074644 794 1.441 - - - - - 0.701 0.740 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
61. tlx2 ENSDARG00000011273 870 1.437 0.728 - - - - 0.709 - - - T cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020208-1]
62. nell2b ENSDARG00000062797 854 1.433 - - - - - 0.706 0.727 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
63. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 1.418 - - - - - 0.708 0.710 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
64. gpr22 gpr22 115 1.417 0.715 - - - - - 0.702 - -
65. neurog1 ENSDARG00000056130 3924 1.412 - - - - - 0.701 0.711 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
66. stmn1b ENSDARG00000033655 9491 1.412 0.704 - - - - - 0.708 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
67. AL928852.1 AL928852.1 23 1 1.000 - - - - - - - -
68. stxbp5a ENSDARG00000002656 318 0.937 0.937 - - - - - - - - syntaxin binding protein 5a (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-041001-161]
69. ftr65 202 0.917 0.917 - - - - - - - - finTRIM family, member 65
70. cacna2d3 ENSDARG00000078760 211 0.908 - - - - - - 0.908 - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
71. ZNF337_7 ZNF337_7 198 0.901 - - - - - - 0.901 - -
72. CNTNAP2A ENSDARG00000058969 97 0.899 - - - - - - 0.899 - - contactin associated protein like 2a [Source:ZFIN;Acc:ZDB-GENE-120328-3]
73. csf1b ENSDARG00000068263 248 0.899 - - - - - 0.899 - - - colony stimulating factor 1b (macrophage) [Source:ZFIN;Acc:ZDB-GENE-061215-106]
74. hoxc1a ENSDARG00000070337 1460 0.898 - - - - - - 0.898 - - homeobox C1a [Source:ZFIN;Acc:ZDB-GENE-000822-2]
75. mks1 ENSDARG00000059657, ENSDARG00000112247 126 0.886 - - - - - 0.886 - - - Meckel syndrome, type 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3813]
76. evlb ENSDARG00000099720 245 0.886 - - - - - - 0.886 - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
77. camsap2 camsap2 1448 0.885 - - - - - - 0.885 - -
78. PKHD1L1 ENSDARG00000091116 39 0.882 - - - - - 0.882 - - - polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-475]
79. si:dkey-4i23.5 ENSDARG00000092137 152 0.88 - - - - - - 0.880 - - si:dkey-4i23.5 [Source:ZFIN;Acc:ZDB-GENE-070912-543]
80. pou4f2 ENSDARG00000069737 451 0.88 - - - - - - 0.880 - - POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
81. pidd pidd 86 0.871 - - - - - - 0.871 - -
82. U3_1 U3_1 61 0.871 - - - - - - 0.871 - -
83. prrt1 ENSDARG00000062208 368 0.866 - - - - - - 0.866 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
84. CT030046.1 CT030046.1 190 0.866 - - - - - - 0.866 - -
85. CR936200.1 CR936200.1 327 0.864 0.864 - - - - - - - -
86. fibinb ENSDARG00000087196, ENSDARG00000110737 53 0.862 0.862 - - - - - - - - fin bud initiation factor b [Source:ZFIN;Acc:ZDB-GENE-050417-423]
87. BX649458.1 BX649458.1 166 0.861 - - - - - - 0.861 - -
88. fam69b ENSDARG00000117093 244 0.86 - - - - - - 0.860 - - family with sequence similarity 69, member B [Source:ZFIN;Acc:ZDB-GENE-080721-1]
89. impdh1b ENSDARG00000029524 7472 0.855 0.855 - - - - - - - - IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
90. lrrc4.1 ENSDARG00000069402 323 0.853 - - - - - - 0.853 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
91. NEK3 ENSDARG00000058869 55 0.851 - - - - - - 0.851 - - NIMA related kinase 3 [Source:HGNC Symbol;Acc:HGNC:7746]
92. GPR101 ENSDARG00000039218 157 0.85 - - - - - - 0.850 - - G protein-coupled receptor 101 [Source:ZFIN;Acc:ZDB-GENE-070914-1]
93. inaa ENSDARG00000011862 115 0.849 - - - - - - 0.849 - - internexin neuronal intermediate filament protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-060531-65]
94. zic2b ENSDARG00000037178, ENSDARG00000112354 993 0.848 - - - - - - 0.848 - - zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
95. CLIP3 ENSDARG00000054456 734 0.847 - - - - - - 0.847 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
96. fsd1 ENSDARG00000062017 207 0.846 - - - - - - 0.846 - - fibronectin type III and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-218]
97. gulp1b ENSDARG00000057833 382 0.846 - - - - - - 0.846 - - GULP, engulfment adaptor PTB domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-120228-2]
98. TUBB2A TUBB2A 142 0.842 - - - - - - 0.842 - -
99. gch2 ENSDARG00000099101 45623 0.842 0.842 - - - - - - - - GTP cyclohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-001205-3]
100. calca ENSDARG00000056590 150 0.842 - - - - - 0.842 - - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]

There are 660 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA